EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000003296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3465 bases
Position: chrGL831194.1:345234-348698
Accession: 100709252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004137	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004138	-	2156	-	ENSONIP00000004137	258 (aa)	XP_013128520	I3J5J7

Gene Model

Click here to download ENSONIG00000003296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000003296	-	100	55.674	ENSONIG00000019434	alyref	100	56.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003296	-	100	73.462	ENSAPOG00000000183	-	100	73.077	Acanthochromis_polyacanthus
ENSONIG00000003296	-	98	56.044	ENSACIG00000006351	alyref	97	57.143	Amphilophus_citrinellus
ENSONIG00000003296	-	100	77.574	ENSACIG00000020351	-	100	77.574	Amphilophus_citrinellus
ENSONIG00000003296	-	100	57.040	ENSAOCG00000014012	alyref	100	58.696	Amphiprion_ocellaris
ENSONIG00000003296	-	100	72.308	ENSAOCG00000019305	-	100	72.308	Amphiprion_ocellaris
ENSONIG00000003296	-	100	57.040	ENSAPEG00000014603	alyref	100	58.696	Amphiprion_percula
ENSONIG00000003296	-	100	71.923	ENSAPEG00000013527	-	100	71.923	Amphiprion_percula
ENSONIG00000003296	-	100	71.154	ENSATEG00000000382	-	100	71.538	Anabas_testudineus
ENSONIG00000003296	-	100	54.610	ENSATEG00000004307	alyref	100	57.092	Anabas_testudineus
ENSONIG00000003296	-	52	62.500	ENSAPLG00000014745	-	97	63.235	Anas_platyrhynchos
ENSONIG00000003296	-	100	95.437	ENSACLG00000010184	-	100	95.437	Astatotilapia_calliptera
ENSONIG00000003296	-	100	55.957	ENSACLG00000008432	alyref	100	56.679	Astatotilapia_calliptera
ENSONIG00000003296	-	100	56.738	ENSAMXG00000007359	alyref	100	56.383	Astyanax_mexicanus
ENSONIG00000003296	-	68	50.000	ENSCING00000013568	-	98	42.857	Ciona_intestinalis
ENSONIG00000003296	-	68	49.451	ENSCSAVG00000003324	-	98	42.692	Ciona_savignyi
ENSONIG00000003296	-	100	56.000	ENSCSEG00000017800	alyref	100	58.182	Cynoglossus_semilaevis
ENSONIG00000003296	-	100	63.077	ENSCVAG00000007789	-	100	62.692	Cyprinodon_variegatus
ENSONIG00000003296	-	100	58.824	ENSCVAG00000014869	alyref	100	58.088	Cyprinodon_variegatus
ENSONIG00000003296	-	100	57.394	ENSDARG00000077732	alyref	100	56.890	Danio_rerio
ENSONIG00000003296	-	98	46.212	ENSEBUG00000008253	alyref	96	42.446	Eptatretus_burgeri
ENSONIG00000003296	-	100	41.221	ENSEBUG00000006305	alyref	100	41.509	Eptatretus_burgeri
ENSONIG00000003296	-	100	56.318	ENSELUG00000017178	alyref	100	56.364	Esox_lucius
ENSONIG00000003296	-	100	60.507	ENSELUG00000008849	-	100	60.727	Esox_lucius
ENSONIG00000003296	-	60	65.190	ENSFALG00000011923	-	94	65.789	Ficedula_albicollis
ENSONIG00000003296	-	100	63.846	ENSFHEG00000004698	-	100	64.231	Fundulus_heteroclitus
ENSONIG00000003296	-	100	57.509	ENSFHEG00000019426	alyref	100	57.509	Fundulus_heteroclitus
ENSONIG00000003296	-	72	64.062	ENSGMOG00000013122	-	100	62.176	Gadus_morhua
ENSONIG00000003296	-	100	54.212	ENSGMOG00000009882	alyref	100	53.309	Gadus_morhua
ENSONIG00000003296	-	100	61.686	ENSGAFG00000007573	-	100	58.846	Gambusia_affinis
ENSONIG00000003296	-	100	56.184	ENSGAFG00000006014	alyref	100	56.115	Gambusia_affinis
ENSONIG00000003296	-	100	55.957	ENSHBUG00000020196	alyref	100	56.679	Haplochromis_burtoni
ENSONIG00000003296	-	100	95.472	ENSHBUG00000001454	-	100	95.472	Haplochromis_burtoni
ENSONIG00000003296	-	98	62.214	ENSHCOG00000012825	-	94	60.784	Hippocampus_comes
ENSONIG00000003296	-	100	58.657	ENSIPUG00000009469	alyref	99	58.484	Ictalurus_punctatus
ENSONIG00000003296	-	78	55.122	ENSSTOG00000016570	-	99	49.091	Ictidomys_tridecemlineatus
ENSONIG00000003296	-	100	65.000	ENSKMAG00000006462	-	100	64.231	Kryptolebias_marmoratus
ENSONIG00000003296	-	100	56.159	ENSKMAG00000008912	alyref	100	57.971	Kryptolebias_marmoratus
ENSONIG00000003296	-	98	67.050	ENSLBEG00000012930	-	99	65.900	Labrus_bergylta
ENSONIG00000003296	-	100	65.950	ENSLBEG00000005387	-	100	65.591	Labrus_bergylta
ENSONIG00000003296	-	97	57.371	ENSLBEG00000023118	alyref	88	59.761	Labrus_bergylta
ENSONIG00000003296	-	82	57.991	ENSLOCG00000013879	alyref	88	57.143	Lepisosteus_oculatus
ENSONIG00000003296	-	100	65.517	ENSMAMG00000005464	-	100	67.308	Mastacembelus_armatus
ENSONIG00000003296	-	100	56.679	ENSMAMG00000003034	alyref	100	55.435	Mastacembelus_armatus
ENSONIG00000003296	-	100	94.297	ENSMZEG00005012096	-	100	94.297	Maylandia_zebra
ENSONIG00000003296	-	100	55.957	ENSMZEG00005008639	alyref	100	56.679	Maylandia_zebra
ENSONIG00000003296	-	99	55.431	ENSMMOG00000007032	-	100	53.077	Mola_mola
ENSONIG00000003296	-	98	56.877	ENSMMOG00000012458	alyref	96	57.037	Mola_mola
ENSONIG00000003296	-	100	69.549	ENSMALG00000006054	-	100	69.173	Monopterus_albus
ENSONIG00000003296	-	97	47.143	ENSMLUG00000030671	-	68	53.368	Myotis_lucifugus
ENSONIG00000003296	-	97	46.831	ENSMLUG00000009247	-	98	47.037	Myotis_lucifugus
ENSONIG00000003296	-	100	49.281	ENSMLUG00000006521	-	100	49.097	Myotis_lucifugus
ENSONIG00000003296	-	100	49.821	ENSMLUG00000004098	-	100	48.529	Myotis_lucifugus
ENSONIG00000003296	-	75	52.551	ENSMLUG00000028605	-	98	44.086	Myotis_lucifugus
ENSONIG00000003296	-	97	45.455	ENSMLUG00000022178	-	69	52.821	Myotis_lucifugus
ENSONIG00000003296	-	100	48.958	ENSMLUG00000014372	-	100	49.462	Myotis_lucifugus
ENSONIG00000003296	-	97	45.105	ENSMLUG00000022467	-	70	50.990	Myotis_lucifugus
ENSONIG00000003296	-	100	55.814	ENSNGAG00000022014	-	100	55.985	Nannospalax_galili
ENSONIG00000003296	-	100	95.437	ENSNBRG00000017460	-	100	95.437	Neolamprologus_brichardi
ENSONIG00000003296	-	100	55.914	ENSNBRG00000001747	alyref	100	56.989	Neolamprologus_brichardi
ENSONIG00000003296	-	98	57.426	ENSORLG00000001620	-	88	55.298	Oryzias_latipes
ENSONIG00000003296	-	99	68.077	ENSORLG00020015673	-	99	66.023	Oryzias_latipes_hni
ENSONIG00000003296	-	100	54.015	ENSORLG00020011942	alyref	100	55.474	Oryzias_latipes_hni
ENSONIG00000003296	-	99	69.466	ENSORLG00015015143	-	99	67.816	Oryzias_latipes_hsok
ENSONIG00000003296	-	100	54.412	ENSORLG00015022664	alyref	100	55.147	Oryzias_latipes_hsok
ENSONIG00000003296	-	100	56.727	ENSOMEG00000019176	alyref	100	56.777	Oryzias_melastigma
ENSONIG00000003296	-	100	66.667	ENSOMEG00000007158	-	99	63.846	Oryzias_melastigma
ENSONIG00000003296	-	72	62.703	ENSPPAG00000036403	-	67	61.622	Pan_paniscus
ENSONIG00000003296	-	98	57.143	ENSPKIG00000006233	-	80	58.301	Paramormyrops_kingsleyae
ENSONIG00000003296	-	100	53.381	ENSPKIG00000007070	alyref	100	54.317	Paramormyrops_kingsleyae
ENSONIG00000003296	-	66	62.941	ENSPMGG00000012994	-	93	61.988	Periophthalmus_magnuspinnatus
ENSONIG00000003296	-	97	54.887	ENSPMGG00000016600	alyref	89	57.519	Periophthalmus_magnuspinnatus
ENSONIG00000003296	-	100	55.598	ENSPEMG00000016628	-	100	52.896	Peromyscus_maniculatus_bairdii
ENSONIG00000003296	-	100	58.007	ENSPFOG00000022825	alyref	99	55.714	Poecilia_formosa
ENSONIG00000003296	-	100	62.692	ENSPFOG00000017094	-	100	62.692	Poecilia_formosa
ENSONIG00000003296	-	100	62.692	ENSPLAG00000014380	-	100	62.692	Poecilia_latipinna
ENSONIG00000003296	-	100	58.214	ENSPLAG00000006948	alyref	100	56.989	Poecilia_latipinna
ENSONIG00000003296	-	100	58.007	ENSPMEG00000003547	alyref	100	55.714	Poecilia_mexicana
ENSONIG00000003296	-	100	62.692	ENSPMEG00000023039	-	100	62.692	Poecilia_mexicana
ENSONIG00000003296	-	100	57.857	ENSPREG00000015795	alyref	100	56.989	Poecilia_reticulata
ENSONIG00000003296	-	100	62.069	ENSPREG00000003649	-	100	62.069	Poecilia_reticulata
ENSONIG00000003296	-	100	55.957	ENSPNYG00000017498	alyref	100	56.679	Pundamilia_nyererei
ENSONIG00000003296	-	98	91.440	ENSPNYG00000002879	-	98	89.922	Pundamilia_nyererei
ENSONIG00000003296	-	97	54.676	ENSPNAG00000002531	alyref	100	55.556	Pygocentrus_nattereri
ENSONIG00000003296	-	74	61.979	ENSSBOG00000030924	-	84	60.938	Saimiri_boliviensis_boliviensis
ENSONIG00000003296	-	99	44.681	ENSSHAG00000012866	-	73	48.990	Sarcophilus_harrisii
ENSONIG00000003296	-	99	46.718	ENSSHAG00000000609	-	98	46.614	Sarcophilus_harrisii
ENSONIG00000003296	-	82	62.326	ENSSFOG00015003923	alyref	72	61.033	Scleropages_formosus
ENSONIG00000003296	-	72	57.500	ENSSFOG00015003678	alyref	83	61.702	Scleropages_formosus
ENSONIG00000003296	-	100	66.541	ENSSMAG00000011169	-	100	69.549	Scophthalmus_maximus
ENSONIG00000003296	-	100	58.423	ENSSMAG00000009283	alyref	100	57.554	Scophthalmus_maximus
ENSONIG00000003296	-	100	57.040	ENSSDUG00000016158	alyref	100	57.971	Seriola_dumerili
ENSONIG00000003296	-	100	54.676	ENSSLDG00000017803	alyref	100	55.596	Seriola_lalandi_dorsalis
ENSONIG00000003296	-	98	76.471	ENSSPAG00000017028	-	96	76.078	Stegastes_partitus
ENSONIG00000003296	-	100	63.100	ENSTRUG00000003051	-	100	61.111	Takifugu_rubripes
ENSONIG00000003296	-	100	53.430	ENSTNIG00000011595	alyref	100	54.511	Tetraodon_nigroviridis
ENSONIG00000003296	-	100	63.359	ENSTNIG00000014136	-	100	57.471	Tetraodon_nigroviridis
ENSONIG00000003296	-	75	62.176	ENSVVUG00000000272	-	82	61.458	Vulpes_vulpes
ENSONIG00000003296	-	98	55.197	ENSXCOG00000018047	alyref	98	56.204	Xiphophorus_couchianus
ENSONIG00000003296	-	100	62.692	ENSXMAG00000018086	-	100	62.692	Xiphophorus_maculatus
ENSONIG00000003296	-	98	55.556	ENSXMAG00000012218	alyref	98	56.204	Xiphophorus_maculatus