EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000003302 (Gene tree)
Gene ID: 100711433
Gene Symbol: gpatch1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9945 bases
Position: chrGL831133.1:10618124-10628068
Accession: 100711433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004149	DUF1604	PF07713.13	9.5e-37	1	1
ENSONIP00000004148	DUF1604	PF07713.13	9.9e-37	1	1
ENSONIP00000004149	G-patch	PF01585.23	5.6e-07	1	1
ENSONIP00000004148	G-patch	PF01585.23	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004150	-	2775	-	ENSONIP00000004149	925 (aa)	-	I3J5K9
ENSONIT00000004149	-	3006	XM_005447773	ENSONIP00000004148	952 (aa)	XP_005447830	I3J5K8

Gene Model

Click here to download ENSONIG00000003302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003302	gpatch1	92	52.784	ENSG00000076650	GPATCH1	83	72.642	Homo_sapiens
ENSONIG00000003302	gpatch1	91	52.934	ENSAMEG00000015575	GPATCH1	81	54.651	Ailuropoda_melanoleuca
ENSONIG00000003302	gpatch1	87	91.758	ENSAOCG00000006668	gpatch1	100	72.449	Amphiprion_ocellaris
ENSONIG00000003302	gpatch1	100	72.699	ENSAPEG00000000026	gpatch1	100	73.347	Amphiprion_percula
ENSONIG00000003302	gpatch1	100	75.077	ENSATEG00000014494	gpatch1	100	76.883	Anabas_testudineus
ENSONIG00000003302	gpatch1	88	50.339	ENSAPLG00000007584	GPATCH1	96	49.377	Anas_platyrhynchos
ENSONIG00000003302	gpatch1	92	52.900	ENSANAG00000027002	GPATCH1	82	55.052	Aotus_nancymaae
ENSONIG00000003302	gpatch1	92	96.806	ENSACLG00000024740	gpatch1	89	96.560	Astatotilapia_calliptera
ENSONIG00000003302	gpatch1	92	57.440	ENSAMXG00000020177	gpatch1	97	56.925	Astyanax_mexicanus
ENSONIG00000003302	gpatch1	91	54.108	ENSBTAG00000000721	GPATCH1	82	55.685	Bos_taurus
ENSONIG00000003302	gpatch1	92	52.656	ENSCJAG00000000684	GPATCH1	82	54.768	Callithrix_jacchus
ENSONIG00000003302	gpatch1	91	53.819	ENSCAFG00000007457	GPATCH1	68	55.412	Canis_familiaris
ENSONIG00000003302	gpatch1	91	53.819	ENSCAFG00020019731	GPATCH1	82	55.412	Canis_lupus_dingo
ENSONIG00000003302	gpatch1	91	54.759	ENSCHIG00000019626	GPATCH1	83	56.170	Capra_hircus
ENSONIG00000003302	gpatch1	88	49.879	ENSCAPG00000008827	GPATCH1	89	50.121	Cavia_aperea
ENSONIG00000003302	gpatch1	91	52.286	ENSCPOG00000024477	GPATCH1	90	52.169	Cavia_porcellus
ENSONIG00000003302	gpatch1	92	52.326	ENSCCAG00000024676	GPATCH1	82	54.381	Cebus_capucinus
ENSONIG00000003302	gpatch1	92	52.442	ENSCATG00000043637	GPATCH1	83	73.585	Cercocebus_atys
ENSONIG00000003302	gpatch1	80	53.960	ENSCLAG00000003395	-	82	53.960	Chinchilla_lanigera
ENSONIG00000003302	gpatch1	92	51.617	ENSCSAG00000004743	GPATCH1	82	53.351	Chlorocebus_sabaeus
ENSONIG00000003302	gpatch1	84	46.338	ENSCHOG00000012865	GPATCH1	80	47.899	Choloepus_hoffmanni
ENSONIG00000003302	gpatch1	80	55.182	ENSCPBG00000000666	GPATCH1	94	53.760	Chrysemys_picta_bellii
ENSONIG00000003302	gpatch1	70	36.309	ENSCING00000012518	-	74	36.157	Ciona_intestinalis
ENSONIG00000003302	gpatch1	82	51.039	ENSCANG00000012540	GPATCH1	89	51.039	Colobus_angolensis_palliatus
ENSONIG00000003302	gpatch1	88	53.494	ENSCGRG00001016736	Gpatch1	80	55.072	Cricetulus_griseus_chok1gshd
ENSONIG00000003302	gpatch1	91	44.808	ENSCGRG00000005069	Gpatch1	77	48.074	Cricetulus_griseus_crigri
ENSONIG00000003302	gpatch1	87	63.911	ENSCSEG00000019456	-	98	64.234	Cynoglossus_semilaevis
ENSONIG00000003302	gpatch1	99	54.755	ENSDARG00000033418	gpatch1	91	58.681	Danio_rerio
ENSONIG00000003302	gpatch1	91	52.982	ENSDNOG00000005291	GPATCH1	84	54.780	Dasypus_novemcinctus
ENSONIG00000003302	gpatch1	95	50.341	ENSDORG00000012546	Gpatch1	84	52.350	Dipodomys_ordii
ENSONIG00000003302	gpatch1	73	32.123	FBgn0036386	CG8833	67	32.225	Drosophila_melanogaster
ENSONIG00000003302	gpatch1	91	49.057	ENSETEG00000003626	GPATCH1	73	54.345	Echinops_telfairi
ENSONIG00000003302	gpatch1	96	36.422	ENSEBUG00000011286	gpatch1	83	39.033	Eptatretus_burgeri
ENSONIG00000003302	gpatch1	91	53.710	ENSEASG00005021162	GPATCH1	88	55.642	Equus_asinus_asinus
ENSONIG00000003302	gpatch1	91	53.882	ENSECAG00000022743	GPATCH1	79	55.959	Equus_caballus
ENSONIG00000003302	gpatch1	74	55.392	ENSEEUG00000012925	GPATCH1	72	55.330	Erinaceus_europaeus
ENSONIG00000003302	gpatch1	99	56.212	ENSELUG00000018195	gpatch1	80	60.821	Esox_lucius
ENSONIG00000003302	gpatch1	91	51.813	ENSFCAG00000014917	GPATCH1	81	54.651	Felis_catus
ENSONIG00000003302	gpatch1	91	51.780	ENSFALG00000007821	GPATCH1	81	53.521	Ficedula_albicollis
ENSONIG00000003302	gpatch1	88	50.176	ENSFDAG00000003871	GPATCH1	82	54.339	Fukomys_damarensis
ENSONIG00000003302	gpatch1	93	53.410	ENSGMOG00000003830	gpatch1	98	53.129	Gadus_morhua
ENSONIG00000003302	gpatch1	95	48.593	ENSGALG00000004839	GPATCH1	92	50.930	Gallus_gallus
ENSONIG00000003302	gpatch1	92	70.175	ENSGACG00000017544	gpatch1	93	70.175	Gasterosteus_aculeatus
ENSONIG00000003302	gpatch1	91	52.169	ENSGAGG00000010067	GPATCH1	81	54.226	Gopherus_agassizii
ENSONIG00000003302	gpatch1	89	52.158	ENSGGOG00000010862	GPATCH1	81	53.743	Gorilla_gorilla
ENSONIG00000003302	gpatch1	100	90.938	ENSHBUG00000023462	gpatch1	100	93.958	Haplochromis_burtoni
ENSONIG00000003302	gpatch1	90	51.477	ENSHGLG00000009334	GPATCH1	81	55.141	Heterocephalus_glaber_female
ENSONIG00000003302	gpatch1	90	51.364	ENSHGLG00100018074	GPATCH1	81	55.013	Heterocephalus_glaber_male
ENSONIG00000003302	gpatch1	95	59.549	ENSIPUG00000014977	gpatch1	90	59.091	Ictalurus_punctatus
ENSONIG00000003302	gpatch1	91	53.521	ENSSTOG00000003720	GPATCH1	81	54.522	Ictidomys_tridecemlineatus
ENSONIG00000003302	gpatch1	91	53.551	ENSJJAG00000023765	Gpatch1	82	55.314	Jaculus_jaculus
ENSONIG00000003302	gpatch1	100	72.435	ENSKMAG00000017950	gpatch1	100	72.539	Kryptolebias_marmoratus
ENSONIG00000003302	gpatch1	93	75.658	ENSLBEG00000026527	gpatch1	90	76.159	Labrus_bergylta
ENSONIG00000003302	gpatch1	92	52.981	ENSLACG00000008130	GPATCH1	80	57.011	Latimeria_chalumnae
ENSONIG00000003302	gpatch1	99	54.010	ENSLOCG00000001800	gpatch1	81	57.881	Lepisosteus_oculatus
ENSONIG00000003302	gpatch1	91	53.873	ENSLAFG00000013589	GPATCH1	90	53.873	Loxodonta_africana
ENSONIG00000003302	gpatch1	91	53.059	ENSMFAG00000034418	GPATCH1	83	73.585	Macaca_fascicularis
ENSONIG00000003302	gpatch1	92	52.717	ENSMMUG00000011790	GPATCH1	83	72.642	Macaca_mulatta
ENSONIG00000003302	gpatch1	92	52.668	ENSMNEG00000045084	GPATCH1	83	71.698	Macaca_nemestrina
ENSONIG00000003302	gpatch1	92	45.012	ENSMLEG00000043840	GPATCH1	79	46.373	Mandrillus_leucophaeus
ENSONIG00000003302	gpatch1	87	91.937	ENSMZEG00005001926	gpatch1	90	96.192	Maylandia_zebra
ENSONIG00000003302	gpatch1	91	51.579	ENSMGAG00000005775	GPATCH1	91	49.272	Meleagris_gallopavo
ENSONIG00000003302	gpatch1	91	47.327	ENSMICG00000004829	GPATCH1	83	49.871	Microcebus_murinus
ENSONIG00000003302	gpatch1	91	52.613	ENSMOCG00000000174	Gpatch1	82	53.788	Microtus_ochrogaster
ENSONIG00000003302	gpatch1	95	67.245	ENSMMOG00000002140	gpatch1	87	72.370	Mola_mola
ENSONIG00000003302	gpatch1	90	51.139	ENSMODG00000012226	GPATCH1	81	54.452	Monodelphis_domestica
ENSONIG00000003302	gpatch1	100	73.909	ENSMALG00000014386	gpatch1	100	72.765	Monopterus_albus
ENSONIG00000003302	gpatch1	94	53.080	ENSMUSG00000063808	Gpatch1	100	76.531	Mus_musculus
ENSONIG00000003302	gpatch1	94	52.477	MGP_PahariEiJ_G0012816	Gpatch1	100	77.551	Mus_pahari
ENSONIG00000003302	gpatch1	94	53.415	MGP_SPRETEiJ_G0030681	Gpatch1	100	77.551	Mus_spretus
ENSONIG00000003302	gpatch1	91	53.972	ENSMPUG00000007658	GPATCH1	81	55.784	Mustela_putorius_furo
ENSONIG00000003302	gpatch1	91	53.154	ENSMLUG00000012161	GPATCH1	82	54.499	Myotis_lucifugus
ENSONIG00000003302	gpatch1	91	53.450	ENSNGAG00000012455	Gpatch1	82	54.897	Nannospalax_galili
ENSONIG00000003302	gpatch1	92	53.132	ENSNLEG00000007659	GPATCH1	83	72.642	Nomascus_leucogenys
ENSONIG00000003302	gpatch1	79	47.619	ENSMEUG00000015174	GPATCH1	77	47.619	Notamacropus_eugenii
ENSONIG00000003302	gpatch1	91	52.576	ENSODEG00000007103	GPATCH1	81	54.334	Octodon_degus
ENSONIG00000003302	gpatch1	94	52.343	ENSOANG00000012732	GPATCH1	82	55.137	Ornithorhynchus_anatinus
ENSONIG00000003302	gpatch1	91	54.302	ENSOCUG00000015905	GPATCH1	82	54.930	Oryctolagus_cuniculus
ENSONIG00000003302	gpatch1	93	71.088	ENSORLG00000018706	gpatch1	89	71.395	Oryzias_latipes
ENSONIG00000003302	gpatch1	92	70.208	ENSOMEG00000022688	gpatch1	92	69.899	Oryzias_melastigma
ENSONIG00000003302	gpatch1	86	55.388	ENSOGAG00000004016	GPATCH1	96	55.627	Otolemur_garnettii
ENSONIG00000003302	gpatch1	91	54.201	ENSOARG00000004365	GPATCH1	81	55.802	Ovis_aries
ENSONIG00000003302	gpatch1	92	51.852	ENSPPAG00000020990	GPATCH1	83	71.963	Pan_paniscus
ENSONIG00000003302	gpatch1	91	52.179	ENSPPRG00000017245	GPATCH1	81	54.651	Panthera_pardus
ENSONIG00000003302	gpatch1	91	52.650	ENSPTIG00000019649	GPATCH1	81	55.297	Panthera_tigris_altaica
ENSONIG00000003302	gpatch1	92	52.552	ENSPTRG00000010803	GPATCH1	83	72.642	Pan_troglodytes
ENSONIG00000003302	gpatch1	92	52.552	ENSPANG00000012374	GPATCH1	83	73.585	Papio_anubis
ENSONIG00000003302	gpatch1	83	60.332	ENSPKIG00000020745	gpatch1	77	60.459	Paramormyrops_kingsleyae
ENSONIG00000003302	gpatch1	91	53.918	ENSPSIG00000013433	GPATCH1	81	54.522	Pelodiscus_sinensis
ENSONIG00000003302	gpatch1	91	53.630	ENSPEMG00000000636	Gpatch1	82	55.627	Peromyscus_maniculatus_bairdii
ENSONIG00000003302	gpatch1	91	53.216	ENSPCIG00000021003	GPATCH1	85	54.780	Phascolarctos_cinereus
ENSONIG00000003302	gpatch1	82	65.973	ENSPREG00000008264	gpatch1	82	64.928	Poecilia_reticulata
ENSONIG00000003302	gpatch1	92	51.044	ENSPPYG00000009824	GPATCH1	81	52.448	Pongo_abelii
ENSONIG00000003302	gpatch1	82	49.858	ENSPCAG00000005931	GPATCH1	74	49.861	Procavia_capensis
ENSONIG00000003302	gpatch1	93	50.571	ENSPCOG00000009674	GPATCH1	87	52.638	Propithecus_coquereli
ENSONIG00000003302	gpatch1	79	53.333	ENSPVAG00000017767	GPATCH1	77	53.333	Pteropus_vampyrus
ENSONIG00000003302	gpatch1	85	95.956	ENSPNYG00000018189	gpatch1	99	93.466	Pundamilia_nyererei
ENSONIG00000003302	gpatch1	93	55.905	ENSPNAG00000013187	gpatch1	91	57.680	Pygocentrus_nattereri
ENSONIG00000003302	gpatch1	91	53.279	ENSRNOG00000011584	Gpatch1	82	55.541	Rattus_norvegicus
ENSONIG00000003302	gpatch1	99	44.984	ENSRBIG00000034723	GPATCH1	82	48.196	Rhinopithecus_bieti
ENSONIG00000003302	gpatch1	92	52.540	ENSRROG00000024428	GPATCH1	83	72.642	Rhinopithecus_roxellana
ENSONIG00000003302	gpatch1	92	52.425	ENSSBOG00000034650	GPATCH1	82	54.510	Saimiri_boliviensis_boliviensis
ENSONIG00000003302	gpatch1	91	53.442	ENSSHAG00000016016	GPATCH1	81	54.452	Sarcophilus_harrisii
ENSONIG00000003302	gpatch1	92	59.003	ENSSFOG00015011535	gpatch1	80	61.168	Scleropages_formosus
ENSONIG00000003302	gpatch1	100	66.143	ENSSMAG00000002883	gpatch1	100	65.256	Scophthalmus_maximus
ENSONIG00000003302	gpatch1	100	72.636	ENSSDUG00000007444	gpatch1	91	76.301	Seriola_dumerili
ENSONIG00000003302	gpatch1	81	81.258	ENSSLDG00000002856	gpatch1	89	80.503	Seriola_lalandi_dorsalis
ENSONIG00000003302	gpatch1	71	57.207	ENSSARG00000004108	GPATCH1	72	56.122	Sorex_araneus
ENSONIG00000003302	gpatch1	91	54.225	ENSSSCG00000002865	GPATCH1	84	55.685	Sus_scrofa
ENSONIG00000003302	gpatch1	91	52.214	ENSTGUG00000009401	GPATCH1	82	54.092	Taeniopygia_guttata
ENSONIG00000003302	gpatch1	99	64.087	ENSTRUG00000005785	-	100	63.983	Takifugu_rubripes
ENSONIG00000003302	gpatch1	99	64.190	ENSTRUG00000025081	gpatch1	100	64.087	Takifugu_rubripes
ENSONIG00000003302	gpatch1	83	69.565	ENSTNIG00000002554	gpatch1	97	69.794	Tetraodon_nigroviridis
ENSONIG00000003302	gpatch1	64	55.114	ENSTBEG00000007750	-	81	54.386	Tupaia_belangeri
ENSONIG00000003302	gpatch1	91	47.730	ENSTTRG00000012221	GPATCH1	81	49.357	Tursiops_truncatus
ENSONIG00000003302	gpatch1	91	52.515	ENSUMAG00000014645	GPATCH1	85	75.238	Ursus_maritimus
ENSONIG00000003302	gpatch1	80	68.571	ENSVPAG00000010313	GPATCH1	75	69.061	Vicugna_pacos
ENSONIG00000003302	gpatch1	91	53.819	ENSVVUG00000016572	GPATCH1	82	55.412	Vulpes_vulpes
ENSONIG00000003302	gpatch1	93	46.364	ENSXETG00000018276	gpatch1	84	49.777	Xenopus_tropicalis