EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000003324 (Gene tree)
Gene ID: 100703750
Gene Symbol: rbbp6
Alias: -
Full Name: E3 ubiquitin-protein ligase RBBP6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 13972 bases
Position: chrGL831326.1:1190088-1204059
Accession: 100703750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004182	zf-CCHC_2	PF13696.6	2.2e-08	1	1
ENSONIP00000004181	zf-CCHC_2	PF13696.6	5.8e-08	1	1
ENSONIP00000004182	zf-CCHC	PF00098.23	6.2e-05	1	1
ENSONIP00000004181	zf-CCHC	PF00098.23	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004183	-	2199	-	ENSONIP00000004182	733 (aa)	-	I3J5P2
ENSONIT00000004182	-	8608	-	ENSONIP00000004181	1802 (aa)	XP_005460803	I3J5P1

Gene Model

Click here to download ENSONIG00000003324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003324's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003324	rbbp6	98	78.141	ENSAPOG00000001357	-	99	77.630	Acanthochromis_polyacanthus
ENSONIG00000003324	rbbp6	99	78.429	ENSAOCG00000022294	-	99	77.467	Amphiprion_ocellaris
ENSONIG00000003324	rbbp6	99	78.638	ENSAPEG00000001446	-	99	78.405	Amphiprion_percula
ENSONIG00000003324	rbbp6	99	73.768	ENSATEG00000009057	-	98	73.300	Anabas_testudineus
ENSONIG00000003324	rbbp6	99	92.183	ENSACLG00000000316	-	99	94.182	Astatotilapia_calliptera
ENSONIG00000003324	rbbp6	100	67.172	ENSFHEG00000002411	-	80	60.671	Fundulus_heteroclitus
ENSONIG00000003324	rbbp6	100	68.455	ENSGAFG00000002762	-	94	92.877	Gambusia_affinis
ENSONIG00000003324	rbbp6	100	96.687	ENSHBUG00000019761	-	100	96.687	Haplochromis_burtoni
ENSONIG00000003324	rbbp6	100	96.245	ENSMZEG00005011490	rbbp6	100	96.245	Maylandia_zebra
ENSONIG00000003324	rbbp6	99	72.096	ENSMALG00000002091	-	98	71.196	Monopterus_albus
ENSONIG00000003324	rbbp6	99	93.396	ENSNBRG00000007660	-	99	95.891	Neolamprologus_brichardi
ENSONIG00000003324	rbbp6	99	69.355	ENSORLG00000008630	-	95	66.088	Oryzias_latipes
ENSONIG00000003324	rbbp6	99	69.220	ENSORLG00020013138	-	99	67.125	Oryzias_latipes_hni
ENSONIG00000003324	rbbp6	99	69.086	ENSORLG00015012612	-	95	67.440	Oryzias_latipes_hsok
ENSONIG00000003324	rbbp6	99	69.624	ENSOMEG00000001913	-	95	67.534	Oryzias_melastigma
ENSONIG00000003324	rbbp6	100	68.582	ENSPFOG00000022154	-	91	87.123	Poecilia_formosa
ENSONIG00000003324	rbbp6	100	68.710	ENSPLAG00000000196	-	79	60.395	Poecilia_latipinna
ENSONIG00000003324	rbbp6	100	70.694	ENSPMEG00000016200	-	74	60.331	Poecilia_mexicana
ENSONIG00000003324	rbbp6	100	69.615	ENSPREG00000000382	-	79	60.118	Poecilia_reticulata
ENSONIG00000003324	rbbp6	99	72.520	ENSSMAG00000002551	-	96	71.728	Scophthalmus_maximus
ENSONIG00000003324	rbbp6	100	76.892	ENSSDUG00000017397	rbbp6	99	75.758	Seriola_dumerili
ENSONIG00000003324	rbbp6	100	77.955	ENSSLDG00000023195	-	91	89.189	Seriola_lalandi_dorsalis
ENSONIG00000003324	rbbp6	99	77.912	ENSSPAG00000013009	-	99	78.504	Stegastes_partitus
ENSONIG00000003324	rbbp6	99	65.789	ENSTRUG00000025959	-	96	64.100	Takifugu_rubripes