EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000003329 (Gene tree)
Gene ID
-
Gene Symbol
rbms1a
Alias
-
Full Name
RNA binding motif%2C single stranded interacting protein 1a
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
11711 bases
Position
chrGL831173.1:4002417-4014127
Accession
ZDB-GENE-030131-4967
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000004189RRM_1PF00076.222.6e-3012
ENSONIP00000004189RRM_1PF00076.222.6e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000004190-1143-ENSONIP00000004189380 (aa)-I3J5P9
Gene Model
Click here to download ENSONIG00000003329's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003329's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000003329rbms1a9965.729ENSONIG00000008934RBMS19965.217
ENSONIG00000003329rbms1a8361.350ENSONIG00000007172rbms37662.893
ENSONIG00000003329rbms1a8560.294ENSONIG00000012198rbms2b8259.767
ENSONIG00000003329rbms1a6753.558ENSONIG00000019676-9153.558
ENSONIG00000003329rbms1a7335.000ENSONIG00000004856celf5a6535.000
ENSONIG00000003329rbms1a5631.963ENSONIG00000001538elavl35232.821
ENSONIG00000003329rbms1a8263.407ENSONIG00000019162rbms2a8563.208
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000003329rbms1a8866.279ENSG00000153250RBMS18485.047Homo_sapiens
ENSONIG00000003329rbms1a9966.071ENSAPOG00000024437-9965.561Acanthochromis_polyacanthus
ENSONIG00000003329rbms1a10093.438ENSAPOG00000013761rbms1a10093.176Acanthochromis_polyacanthus
ENSONIG00000003329rbms1a8865.230ENSAMEG00000012661RBMS19165.043Ailuropoda_melanoleuca
ENSONIG00000003329rbms1a8867.151ENSACIG00000021498RBMS18767.151Amphilophus_citrinellus
ENSONIG00000003329rbms1a10087.664ENSACIG00000000113rbms1a10087.664Amphilophus_citrinellus
ENSONIG00000003329rbms1a9966.496ENSAOCG00000014482-9965.985Amphiprion_ocellaris
ENSONIG00000003329rbms1a10093.438ENSAOCG00000010066rbms1a10093.176Amphiprion_ocellaris
ENSONIG00000003329rbms1a10093.963ENSAPEG00000023563rbms1a10093.963Amphiprion_percula
ENSONIG00000003329rbms1a9966.240ENSAPEG00000018371-9965.729Amphiprion_percula
ENSONIG00000003329rbms1a9965.722ENSATEG00000018573RBMS19965.464Anabas_testudineus
ENSONIG00000003329rbms1a10091.601ENSATEG00000015450rbms1a10091.339Anabas_testudineus
ENSONIG00000003329rbms1a8865.797ENSAPLG00000007282RBMS18765.607Anas_platyrhynchos
ENSONIG00000003329rbms1a9462.500ENSACAG00000011984RBMS17264.368Anolis_carolinensis
ENSONIG00000003329rbms1a8164.669ENSANAG00000024424RBMS19864.669Aotus_nancymaae
ENSONIG00000003329rbms1a10096.316ENSACLG00000021512rbms1a10096.316Astatotilapia_calliptera
ENSONIG00000003329rbms1a9964.706ENSACLG00000013048RBMS19964.450Astatotilapia_calliptera
ENSONIG00000003329rbms1a9962.660ENSAMXG00000002146rbms1a9862.148Astyanax_mexicanus
ENSONIG00000003329rbms1a9965.816ENSAMXG00000009969RBMS19965.561Astyanax_mexicanus
ENSONIG00000003329rbms1a8865.994ENSBTAG00000005180RBMS19962.250Bos_taurus
ENSONIG00000003329rbms1a8866.087ENSCJAG00000014861-8865.797Callithrix_jacchus
ENSONIG00000003329rbms1a9661.842ENSCJAG00000012871-9264.058Callithrix_jacchus
ENSONIG00000003329rbms1a8861.628ENSCJAG00000022465-9461.449Callithrix_jacchus
ENSONIG00000003329rbms1a8865.706ENSCAFG00000009922RBMS19962.000Canis_familiaris
ENSONIG00000003329rbms1a8865.988ENSCAFG00020006120RBMS19959.806Canis_lupus_dingo
ENSONIG00000003329rbms1a8866.279ENSCHIG00000023380RBMS18666.087Capra_hircus
ENSONIG00000003329rbms1a8866.279ENSTSYG00000005584RBMS19366.087Carlito_syrichta
ENSONIG00000003329rbms1a8865.988ENSCPOG00000012310RBMS19262.881Cavia_porcellus
ENSONIG00000003329rbms1a8865.706ENSCCAG00000033841RBMS19065.517Cebus_capucinus
ENSONIG00000003329rbms1a8866.279ENSCATG00000043032RBMS19863.421Cercocebus_atys
ENSONIG00000003329rbms1a8865.988ENSCLAG00000003031RBMS19462.881Chinchilla_lanigera
ENSONIG00000003329rbms1a8865.994ENSCSAG00000015687RBMS18665.805Chlorocebus_sabaeus
ENSONIG00000003329rbms1a6082.500ENSCHOG00000001579RBMS15681.481Choloepus_hoffmanni
ENSONIG00000003329rbms1a9962.312ENSCPBG00000026455RBMS19962.312Chrysemys_picta_bellii
ENSONIG00000003329rbms1a8866.279ENSCANG00000042152RBMS19863.421Colobus_angolensis_palliatus
ENSONIG00000003329rbms1a8865.407ENSCGRG00001022833Rbms19958.838Cricetulus_griseus_chok1gshd
ENSONIG00000003329rbms1a8865.407ENSCGRG00000008824Rbms19262.327Cricetulus_griseus_crigri
ENSONIG00000003329rbms1a9963.520ENSCSEG00000010652RBMS19863.010Cynoglossus_semilaevis
ENSONIG00000003329rbms1a10090.314ENSCSEG00000000889rbms1a10090.052Cynoglossus_semilaevis
ENSONIG00000003329rbms1a10089.764ENSCVAG00000014698rbms1a10089.501Cyprinodon_variegatus
ENSONIG00000003329rbms1a9966.839ENSCVAG00000002027RBMS19965.803Cyprinodon_variegatus
ENSONIG00000003329rbms1a9863.776ENSDARG00000074023rbms1a9863.520Danio_rerio
ENSONIG00000003329rbms1a8863.361ENSDNOG00000040691RBMS19463.187Dasypus_novemcinctus
ENSONIG00000003329rbms1a8866.377ENSDORG00000007103Rbms19463.260Dipodomys_ordii
ENSONIG00000003329rbms1a8857.803ENSETEG00000012135RBMS19157.637Echinops_telfairi
ENSONIG00000003329rbms1a8865.706ENSEASG00005023132RBMS19962.000Equus_asinus_asinus
ENSONIG00000003329rbms1a8865.706ENSECAG00000019894RBMS19959.806Equus_caballus
ENSONIG00000003329rbms1a6681.633ENSEEUG00000005628RBMS16580.000Erinaceus_europaeus
ENSONIG00000003329rbms1a10071.538ENSELUG00000018923rbms1a10070.769Esox_lucius
ENSONIG00000003329rbms1a8858.140ENSELUG00000019328RBMS18558.140Esox_lucius
ENSONIG00000003329rbms1a8865.797ENSFCAG00000012524RBMS19365.507Felis_catus
ENSONIG00000003329rbms1a8866.087ENSFALG00000004440RBMS19365.896Ficedula_albicollis
ENSONIG00000003329rbms1a8866.279ENSFDAG00000015692RBMS19263.158Fukomys_damarensis
ENSONIG00000003329rbms1a10090.551ENSFHEG00000005662rbms1a10090.289Fundulus_heteroclitus
ENSONIG00000003329rbms1a9967.183ENSFHEG00000000720RBMS19966.925Fundulus_heteroclitus
ENSONIG00000003329rbms1a8978.632ENSGMOG00000000525rbms1a10078.632Gadus_morhua
ENSONIG00000003329rbms1a8866.087ENSGALG00000011132RBMS19365.896Gallus_gallus
ENSONIG00000003329rbms1a9493.017ENSGAFG00000011633rbms1a9992.737Gambusia_affinis
ENSONIG00000003329rbms1a9965.897ENSGAFG00000007708RBMS19965.897Gambusia_affinis
ENSONIG00000003329rbms1a9189.751ENSGACG00000015174rbms1a9194.620Gasterosteus_aculeatus
ENSONIG00000003329rbms1a9966.408ENSGACG00000005671RBMS19965.891Gasterosteus_aculeatus
ENSONIG00000003329rbms1a9962.563ENSGAGG00000007866RBMS19962.060Gopherus_agassizii
ENSONIG00000003329rbms1a8866.279ENSGGOG00000001264RBMS19366.087Gorilla_gorilla
ENSONIG00000003329rbms1a8964.489ENSGGOG00000043756-10060.741Gorilla_gorilla
ENSONIG00000003329rbms1a9365.946ENSHBUG00000004516RBMS19765.405Haplochromis_burtoni
ENSONIG00000003329rbms1a10096.316ENSHBUG00000004802rbms1a10096.316Haplochromis_burtoni
ENSONIG00000003329rbms1a8866.377ENSHGLG00000010387RBMS19263.260Heterocephalus_glaber_female
ENSONIG00000003329rbms1a8866.377ENSHGLG00100014105RBMS19263.260Heterocephalus_glaber_male
ENSONIG00000003329rbms1a9963.846ENSHCOG00000016668RBMS19863.077Hippocampus_comes
ENSONIG00000003329rbms1a10090.026ENSHCOG00000020097rbms1a10089.764Hippocampus_comes
ENSONIG00000003329rbms1a9966.752ENSIPUG00000014677RBMS19966.496Ictalurus_punctatus
ENSONIG00000003329rbms1a9863.333ENSIPUG00000010131RBMS19862.821Ictalurus_punctatus
ENSONIG00000003329rbms1a8866.570ENSSTOG00000012501RBMS19263.435Ictidomys_tridecemlineatus
ENSONIG00000003329rbms1a8865.698ENSJJAG00000016543Rbms19462.604Jaculus_jaculus
ENSONIG00000003329rbms1a10088.714ENSKMAG00000011839-10088.451Kryptolebias_marmoratus
ENSONIG00000003329rbms1a9965.729ENSKMAG00000013911RBMS19965.729Kryptolebias_marmoratus
ENSONIG00000003329rbms1a9965.473ENSLBEG00000005787RBMS19964.962Labrus_bergylta
ENSONIG00000003329rbms1a10092.651ENSLBEG00000025962rbms1a10092.388Labrus_bergylta
ENSONIG00000003329rbms1a9962.563ENSLACG00000004324RBMS19862.563Latimeria_chalumnae
ENSONIG00000003329rbms1a9965.729ENSLOCG00000008622rbms1a9965.473Lepisosteus_oculatus
ENSONIG00000003329rbms1a8865.698ENSLAFG00000017217RBMS19165.507Loxodonta_africana
ENSONIG00000003329rbms1a8866.279ENSMFAG00000000274RBMS19863.660Macaca_fascicularis
ENSONIG00000003329rbms1a8865.994ENSMMUG00000016825RBMS19960.048Macaca_mulatta
ENSONIG00000003329rbms1a8866.279ENSMNEG00000039425RBMS19863.660Macaca_nemestrina
ENSONIG00000003329rbms1a8865.988ENSMLEG00000031517RBMS19863.158Mandrillus_leucophaeus
ENSONIG00000003329rbms1a9964.615ENSMAMG00000003159-9965.128Mastacembelus_armatus
ENSONIG00000003329rbms1a10090.289ENSMAMG00000005018rbms1a10090.026Mastacembelus_armatus
ENSONIG00000003329rbms1a10096.316ENSMZEG00005005661rbms1a10096.316Maylandia_zebra
ENSONIG00000003329rbms1a8368.111ENSMZEG00005007313RBMS19068.111Maylandia_zebra
ENSONIG00000003329rbms1a8865.418ENSMGAG00000011054RBMS19864.198Meleagris_gallopavo
ENSONIG00000003329rbms1a8865.407ENSMAUG00000008550Rbms19959.080Mesocricetus_auratus
ENSONIG00000003329rbms1a8865.130ENSMICG00000008325RBMS19462.327Microcebus_murinus
ENSONIG00000003329rbms1a8865.698ENSMOCG00000022617Rbms19959.322Microtus_ochrogaster
ENSONIG00000003329rbms1a10086.877ENSMMOG00000018249rbms1a10086.614Mola_mola
ENSONIG00000003329rbms1a9965.473ENSMMOG00000003707RBMS19965.217Mola_mola
ENSONIG00000003329rbms1a8866.087ENSMODG00000005250RBMS18665.896Monodelphis_domestica
ENSONIG00000003329rbms1a9766.133ENSMALG00000015715-9966.146Monopterus_albus
ENSONIG00000003329rbms1a10091.339ENSMALG00000014235rbms1a10091.076Monopterus_albus
ENSONIG00000003329rbms1a8865.217MGP_CAROLIEiJ_G0023586Rbms19958.937Mus_caroli
ENSONIG00000003329rbms1a8865.217ENSMUSG00000026970Rbms19958.937Mus_musculus
ENSONIG00000003329rbms1a8865.217MGP_PahariEiJ_G0025037Rbms19961.307Mus_pahari
ENSONIG00000003329rbms1a8865.507MGP_SPRETEiJ_G0024508Rbms19470.053Mus_spretus
ENSONIG00000003329rbms1a8863.056ENSMPUG00000000539RBMS18662.881Mustela_putorius_furo
ENSONIG00000003329rbms1a8862.983ENSMLUG00000008762RBMS18762.810Myotis_lucifugus
ENSONIG00000003329rbms1a8865.988ENSNGAG00000013636Rbms19959.322Nannospalax_galili
ENSONIG00000003329rbms1a8863.372ENSNBRG00000015151RBMS19363.372Neolamprologus_brichardi
ENSONIG00000003329rbms1a10088.947ENSNBRG00000020217rbms1a10088.947Neolamprologus_brichardi
ENSONIG00000003329rbms1a8866.279ENSNLEG00000001667RBMS19366.087Nomascus_leucogenys
ENSONIG00000003329rbms1a8154.574ENSMEUG00000000746RBMS19854.574Notamacropus_eugenii
ENSONIG00000003329rbms1a8860.519ENSOPRG00000012431RBMS18660.345Ochotona_princeps
ENSONIG00000003329rbms1a8865.988ENSODEG00000013934RBMS19462.881Octodon_degus
ENSONIG00000003329rbms1a8865.418ENSOANG00000006166RBMS18865.230Ornithorhynchus_anatinus
ENSONIG00000003329rbms1a5643.750ENSOANG00000004477-10043.750Ornithorhynchus_anatinus
ENSONIG00000003329rbms1a8866.957ENSOCUG00000017365RBMS18166.763Oryctolagus_cuniculus
ENSONIG00000003329rbms1a10088.714ENSORLG00000003917rbms1a10088.451Oryzias_latipes
ENSONIG00000003329rbms1a9766.489ENSORLG00000016818RBMS19766.494Oryzias_latipes
ENSONIG00000003329rbms1a10088.451ENSORLG00020018663rbms1a10088.189Oryzias_latipes_hni
ENSONIG00000003329rbms1a9766.489ENSORLG00020022335RBMS19766.494Oryzias_latipes_hni
ENSONIG00000003329rbms1a10088.976ENSORLG00015016556rbms1a10088.714Oryzias_latipes_hsok
ENSONIG00000003329rbms1a9767.021ENSORLG00015018208RBMS19767.013Oryzias_latipes_hsok
ENSONIG00000003329rbms1a9766.402ENSOMEG00000002394RBMS19766.150Oryzias_melastigma
ENSONIG00000003329rbms1a8865.043ENSOGAG00000002900RBMS19364.857Otolemur_garnettii
ENSONIG00000003329rbms1a8866.279ENSOARG00000006870RBMS19462.810Ovis_aries
ENSONIG00000003329rbms1a8865.994ENSPPAG00000040083RBMS19165.805Pan_paniscus
ENSONIG00000003329rbms1a8863.112ENSPPAG00000036520-9162.931Pan_paniscus
ENSONIG00000003329rbms1a8865.797ENSPPRG00000005040RBMS19365.507Panthera_pardus
ENSONIG00000003329rbms1a8865.797ENSPTIG00000021240RBMS19365.507Panthera_tigris_altaica
ENSONIG00000003329rbms1a8863.977ENSPTRG00000039358-9860.000Pan_troglodytes
ENSONIG00000003329rbms1a8865.994ENSPTRG00000052304RBMS19165.805Pan_troglodytes
ENSONIG00000003329rbms1a8866.279ENSPANG00000001383RBMS19165.805Papio_anubis
ENSONIG00000003329rbms1a9962.725ENSPKIG00000012818rbms1a9962.982Paramormyrops_kingsleyae
ENSONIG00000003329rbms1a9963.291ENSPKIG00000001498rbms1a9962.785Paramormyrops_kingsleyae
ENSONIG00000003329rbms1a8866.087ENSPSIG00000010240RBMS19264.075Pelodiscus_sinensis
ENSONIG00000003329rbms1a8466.871ENSPMGG00000006310RBMS19462.170Periophthalmus_magnuspinnatus
ENSONIG00000003329rbms1a10084.737ENSPMGG00000004341rbms1a10084.737Periophthalmus_magnuspinnatus
ENSONIG00000003329rbms1a8865.698ENSPEMG00000009449Rbms19560.453Peromyscus_maniculatus_bairdii
ENSONIG00000003329rbms1a9962.563ENSPCIG00000018405RBMS19962.563Phascolarctos_cinereus
ENSONIG00000003329rbms1a9966.240ENSPFOG00000017483RBMS19965.985Poecilia_formosa
ENSONIG00000003329rbms1a10091.339ENSPFOG00000016116rbms1a10091.076Poecilia_formosa
ENSONIG00000003329rbms1a9966.154ENSPLAG00000000920RBMS19966.154Poecilia_latipinna
ENSONIG00000003329rbms1a10091.339ENSPLAG00000013864rbms1a10091.076Poecilia_latipinna
ENSONIG00000003329rbms1a9966.240ENSPMEG00000015838RBMS19965.985Poecilia_mexicana
ENSONIG00000003329rbms1a10091.076ENSPMEG00000016185rbms1a10090.814Poecilia_mexicana
ENSONIG00000003329rbms1a9965.985ENSPREG00000008146RBMS19965.985Poecilia_reticulata
ENSONIG00000003329rbms1a10091.339ENSPREG00000020161rbms1a10091.076Poecilia_reticulata
ENSONIG00000003329rbms1a8863.361ENSPPYG00000012879-8663.187Pongo_abelii
ENSONIG00000003329rbms1a7668.896ENSPCAG00000009673RBMS17468.667Procavia_capensis
ENSONIG00000003329rbms1a8865.698ENSPCOG00000027294RBMS19365.507Propithecus_coquereli
ENSONIG00000003329rbms1a8857.637ENSPVAG00000010429RBMS18657.471Pteropus_vampyrus
ENSONIG00000003329rbms1a9965.217ENSPNYG00000002643RBMS19964.706Pundamilia_nyererei
ENSONIG00000003329rbms1a9966.582ENSPNAG00000023479RBMS19966.327Pygocentrus_nattereri
ENSONIG00000003329rbms1a8866.082ENSPNAG00000010225rbms1a8766.181Pygocentrus_nattereri
ENSONIG00000003329rbms1a8865.407ENSRNOG00000008482Rbms19062.327Rattus_norvegicus
ENSONIG00000003329rbms1a9959.615ENSRBIG00000044262RBMS19862.992Rhinopithecus_bieti
ENSONIG00000003329rbms1a9959.856ENSRROG00000043108RBMS19863.421Rhinopithecus_roxellana
ENSONIG00000003329rbms1a8865.706ENSSBOG00000034705RBMS19365.517Saimiri_boliviensis_boliviensis
ENSONIG00000003329rbms1a8865.797ENSSHAG00000012271RBMS19961.538Sarcophilus_harrisii
ENSONIG00000003329rbms1a9964.706ENSSFOG00015022929rbms19964.194Scleropages_formosus
ENSONIG00000003329rbms1a8866.472ENSSFOG00015014493rbms1a9366.472Scleropages_formosus
ENSONIG00000003329rbms1a9965.385ENSSMAG00000012152RBMS19565.641Scophthalmus_maximus
ENSONIG00000003329rbms1a9093.255ENSSMAG00000012722rbms1a9693.255Scophthalmus_maximus
ENSONIG00000003329rbms1a9965.128ENSSDUG00000018803RBMS19864.615Seriola_dumerili
ENSONIG00000003329rbms1a10093.438ENSSDUG00000020602rbms1a10093.176Seriola_dumerili
ENSONIG00000003329rbms1a10093.438ENSSLDG00000009495rbms1a10093.176Seriola_lalandi_dorsalis
ENSONIG00000003329rbms1a9965.128ENSSLDG00000016556RBMS19864.615Seriola_lalandi_dorsalis
ENSONIG00000003329rbms1a7650.836ENSSARG00000011085RBMS17450.667Sorex_araneus
ENSONIG00000003329rbms1a8865.706ENSSPUG00000017163RBMS19365.517Sphenodon_punctatus
ENSONIG00000003329rbms1a9966.071ENSSPAG00000000059RBMS19965.561Stegastes_partitus
ENSONIG00000003329rbms1a10093.438ENSSPAG00000005371rbms1a10093.176Stegastes_partitus
ENSONIG00000003329rbms1a8866.279ENSSSCG00000015888RBMS19962.469Sus_scrofa
ENSONIG00000003329rbms1a8866.087ENSTGUG00000006606RBMS18665.896Taeniopygia_guttata
ENSONIG00000003329rbms1a9962.850ENSTRUG00000005466-9961.832Takifugu_rubripes
ENSONIG00000003329rbms1a10086.458ENSTRUG00000017155rbms1a10086.979Takifugu_rubripes
ENSONIG00000003329rbms1a9365.097ENSTNIG00000016496RBMS19666.087Tetraodon_nigroviridis
ENSONIG00000003329rbms1a8888.657ENSTNIG00000009477rbms1a10085.174Tetraodon_nigroviridis
ENSONIG00000003329rbms1a8860.519ENSTBEG00000016156RBMS19160.345Tupaia_belangeri
ENSONIG00000003329rbms1a8865.994ENSTTRG00000011058RBMS19165.805Tursiops_truncatus
ENSONIG00000003329rbms1a8865.988ENSUAMG00000022331RBMS19363.467Ursus_americanus
ENSONIG00000003329rbms1a8865.988ENSUMAG00000008605RBMS18965.797Ursus_maritimus
ENSONIG00000003329rbms1a8368.210ENSVPAG00000002716RBMS18767.378Vicugna_pacos
ENSONIG00000003329rbms1a8865.988ENSVVUG00000018682RBMS19365.797Vulpes_vulpes
ENSONIG00000003329rbms1a9357.724ENSXETG00000016204rbms19458.405Xenopus_tropicalis
ENSONIG00000003329rbms1a10086.877ENSXCOG00000001659rbms1a10086.614Xiphophorus_couchianus
ENSONIG00000003329rbms1a8868.314ENSXCOG00000000211RBMS19767.688Xiphophorus_couchianus
ENSONIG00000003329rbms1a9965.985ENSXMAG00000011405RBMS19965.473Xiphophorus_maculatus
ENSONIG00000003329rbms1a10091.076ENSXMAG00000001802rbms1a10090.814Xiphophorus_maculatus

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