EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000003531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 40293 bases
Position: chrGL831263.1:462155-502447
Accession: 100693459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004447	ResIII	PF04851.15	6.4e-18	1	1
ENSONIP00000004446	ResIII	PF04851.15	2.9e-17	1	1
ENSONIP00000004447	DEAD	PF00270.29	2.4e-19	1	1
ENSONIP00000004446	DEAD	PF00270.29	3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004448	-	6495	-	ENSONIP00000004446	2090 (aa)	XP_005477201	I3J6F6
ENSONIT00000004449	-	6027	-	ENSONIP00000004447	2009 (aa)	-	I3J6F7

Gene Model

Click here to download ENSONIG00000003531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003531	-	95	51.691	ENSG00000187790	FANCM	97	64.427	Homo_sapiens
ENSONIG00000003531	-	80	51.103	ENSAMEG00000002114	FANCM	80	51.149	Ailuropoda_melanoleuca
ENSONIG00000003531	-	91	78.819	ENSATEG00000012412	-	91	78.819	Anabas_testudineus
ENSONIG00000003531	-	81	51.126	ENSANAG00000025075	FANCM	81	50.930	Aotus_nancymaae
ENSONIG00000003531	-	100	94.993	ENSACLG00000016008	-	100	94.945	Astatotilapia_calliptera
ENSONIG00000003531	-	78	63.766	ENSAMXG00000020275	-	89	63.766	Astyanax_mexicanus
ENSONIG00000003531	-	89	50.286	ENSBTAG00000002612	FANCM	98	62.331	Bos_taurus
ENSONIG00000003531	-	100	40.178	ENSCJAG00000015945	FANCM	81	51.370	Callithrix_jacchus
ENSONIG00000003531	-	89	50.385	ENSCAFG00000014062	FANCM	81	50.481	Canis_familiaris
ENSONIG00000003531	-	89	50.048	ENSCHIG00000015176	FANCM	81	50.000	Capra_hircus
ENSONIG00000003531	-	79	54.587	ENSCPOG00000001446	FANCM	80	49.324	Cavia_porcellus
ENSONIG00000003531	-	76	51.429	ENSCCAG00000026593	FANCM	79	51.232	Cebus_capucinus
ENSONIG00000003531	-	100	40.474	ENSCATG00000031379	FANCM	81	51.158	Cercocebus_atys
ENSONIG00000003531	-	100	40.406	ENSCSAG00000015308	FANCM	81	50.821	Chlorocebus_sabaeus
ENSONIG00000003531	-	78	49.712	ENSCPBG00000015089	FANCM	68	58.897	Chrysemys_picta_bellii
ENSONIG00000003531	-	100	40.341	ENSCANG00000029498	FANCM	81	50.821	Colobus_angolensis_palliatus
ENSONIG00000003531	-	79	56.763	ENSCGRG00001023573	Fancm	77	54.315	Cricetulus_griseus_chok1gshd
ENSONIG00000003531	-	90	72.385	ENSCSEG00000002313	-	92	73.090	Cynoglossus_semilaevis
ENSONIG00000003531	-	80	81.523	ENSCVAG00000015579	-	88	81.653	Cyprinodon_variegatus
ENSONIG00000003531	-	89	50.965	ENSDNOG00000007697	FANCM	82	51.013	Dasypus_novemcinctus
ENSONIG00000003531	-	77	55.517	ENSDORG00000010095	Fancm	80	50.688	Dipodomys_ordii
ENSONIG00000003531	-	63	57.143	ENSETEG00000003360	FANCM	53	57.447	Echinops_telfairi
ENSONIG00000003531	-	86	50.337	ENSEASG00005007781	FANCM	96	64.861	Equus_asinus_asinus
ENSONIG00000003531	-	90	50.433	ENSECAG00000018694	FANCM	65	50.769	Equus_caballus
ENSONIG00000003531	-	66	50.000	ENSEEUG00000005607	-	53	50.575	Erinaceus_europaeus
ENSONIG00000003531	-	77	72.200	ENSELUG00000015761	-	78	72.118	Esox_lucius
ENSONIG00000003531	-	75	53.940	ENSFALG00000001703	FANCM	77	53.719	Ficedula_albicollis
ENSONIG00000003531	-	93	43.836	ENSFDAG00000009043	FANCM	68	57.524	Fukomys_damarensis
ENSONIG00000003531	-	89	67.907	ENSGMOG00000002019	-	99	65.270	Gadus_morhua
ENSONIG00000003531	-	73	55.443	ENSGALG00000031182	FANCM	78	55.138	Gallus_gallus
ENSONIG00000003531	-	90	76.596	ENSGACG00000009448	-	91	76.596	Gasterosteus_aculeatus
ENSONIG00000003531	-	82	51.691	ENSGGOG00000008546	FANCM	81	51.498	Gorilla_gorilla
ENSONIG00000003531	-	100	93.556	ENSHBUG00000007085	-	100	93.509	Haplochromis_burtoni
ENSONIG00000003531	-	100	39.279	ENSHGLG00000013787	FANCM	99	39.419	Heterocephalus_glaber_female
ENSONIG00000003531	-	100	39.232	ENSHGLG00100006377	FANCM	99	39.373	Heterocephalus_glaber_male
ENSONIG00000003531	-	90	63.962	ENSIPUG00000014629	fancm	90	63.962	Ictalurus_punctatus
ENSONIG00000003531	-	91	65.481	ENSLBEG00000004982	-	89	75.489	Labrus_bergylta
ENSONIG00000003531	-	91	59.830	ENSLACG00000007739	FANCM	70	59.466	Latimeria_chalumnae
ENSONIG00000003531	-	84	66.424	ENSLOCG00000011318	FANCM	90	49.607	Lepisosteus_oculatus
ENSONIG00000003531	-	81	50.286	ENSLAFG00000001136	FANCM	80	50.967	Loxodonta_africana
ENSONIG00000003531	-	100	40.389	ENSMFAG00000000383	FANCM	81	51.062	Macaca_fascicularis
ENSONIG00000003531	-	100	40.437	ENSMMUG00000016513	FANCM	81	51.062	Macaca_mulatta
ENSONIG00000003531	-	100	40.389	ENSMNEG00000038659	FANCM	81	50.965	Macaca_nemestrina
ENSONIG00000003531	-	98	54.545	ENSMLEG00000035743	FANCM	80	54.545	Mandrillus_leucophaeus
ENSONIG00000003531	-	91	76.471	ENSMAMG00000007087	-	90	77.257	Mastacembelus_armatus
ENSONIG00000003531	-	100	94.754	ENSMZEG00005004644	-	100	94.707	Maylandia_zebra
ENSONIG00000003531	-	79	54.177	ENSMAUG00000015450	Fancm	78	54.254	Mesocricetus_auratus
ENSONIG00000003531	-	81	51.644	ENSMICG00000005811	FANCM	81	51.451	Microcebus_murinus
ENSONIG00000003531	-	85	60.076	ENSMOCG00000008775	Fancm	71	60.203	Microtus_ochrogaster
ENSONIG00000003531	-	82	78.426	ENSMMOG00000010215	-	88	78.426	Mola_mola
ENSONIG00000003531	-	85	48.507	ENSMODG00000007334	FANCM	80	48.694	Monodelphis_domestica
ENSONIG00000003531	-	79	57.337	MGP_CAROLIEiJ_G0017791	Fancm	83	47.822	Mus_caroli
ENSONIG00000003531	-	79	57.108	ENSMUSG00000055884	Fancm	95	62.519	Mus_musculus
ENSONIG00000003531	-	91	54.433	MGP_PahariEiJ_G0029547	Fancm	73	49.837	Mus_pahari
ENSONIG00000003531	-	79	57.355	MGP_SPRETEiJ_G0018636	Fancm	78	56.737	Mus_spretus
ENSONIG00000003531	-	91	49.857	ENSMPUG00000004849	FANCM	83	49.527	Mustela_putorius_furo
ENSONIG00000003531	-	100	39.451	ENSMLUG00000006671	FANCM	99	39.173	Myotis_lucifugus
ENSONIG00000003531	-	79	56.328	ENSNGAG00000017199	Fancm	70	56.258	Nannospalax_galili
ENSONIG00000003531	-	100	40.676	ENSNLEG00000004432	FANCM	81	51.401	Nomascus_leucogenys
ENSONIG00000003531	-	59	52.614	ENSMEUG00000004977	-	60	53.181	Notamacropus_eugenii
ENSONIG00000003531	-	73	59.599	ENSOANG00000013997	FANCM	68	59.544	Ornithorhynchus_anatinus
ENSONIG00000003531	-	100	40.086	ENSOCUG00000007539	FANCM	50	51.149	Oryctolagus_cuniculus
ENSONIG00000003531	-	90	77.251	ENSORLG00000014503	-	91	77.251	Oryzias_latipes
ENSONIG00000003531	-	90	77.370	ENSORLG00020013516	-	91	77.370	Oryzias_latipes_hni
ENSONIG00000003531	-	90	77.224	ENSORLG00015012100	-	91	77.224	Oryzias_latipes_hsok
ENSONIG00000003531	-	90	78.460	ENSOMEG00000010717	-	91	78.460	Oryzias_melastigma
ENSONIG00000003531	-	81	51.255	ENSOGAG00000003015	FANCM	82	51.158	Otolemur_garnettii
ENSONIG00000003531	-	89	50.048	ENSOARG00000009429	FANCM	89	50.000	Ovis_aries
ENSONIG00000003531	-	95	51.787	ENSPPAG00000028944	FANCM	81	51.594	Pan_paniscus
ENSONIG00000003531	-	82	51.594	ENSPTRG00000006307	FANCM	81	51.401	Pan_troglodytes
ENSONIG00000003531	-	100	40.313	ENSPANG00000023200	FANCM	81	51.062	Papio_anubis
ENSONIG00000003531	-	78	58.312	ENSPEMG00000005619	Fancm	62	58.312	Peromyscus_maniculatus_bairdii
ENSONIG00000003531	-	87	80.707	ENSPFOG00000002008	-	85	82.222	Poecilia_formosa
ENSONIG00000003531	-	90	77.041	ENSPLAG00000014164	-	92	77.041	Poecilia_latipinna
ENSONIG00000003531	-	90	76.505	ENSPMEG00000010746	-	92	76.860	Poecilia_mexicana
ENSONIG00000003531	-	90	76.331	ENSPREG00000019849	-	92	76.331	Poecilia_reticulata
ENSONIG00000003531	-	80	51.401	ENSPPYG00000005781	FANCM	84	51.208	Pongo_abelii
ENSONIG00000003531	-	75	63.953	ENSPCOG00000014388	FANCM	79	63.953	Propithecus_coquereli
ENSONIG00000003531	-	65	64.807	ENSPVAG00000015802	FANCM	64	64.807	Pteropus_vampyrus
ENSONIG00000003531	-	90	58.522	ENSPNAG00000013558	-	85	58.522	Pygocentrus_nattereri
ENSONIG00000003531	-	78	57.016	ENSRNOG00000056721	Fancm	77	56.511	Rattus_norvegicus
ENSONIG00000003531	-	95	51.056	ENSRBIG00000011451	FANCM	81	50.768	Rhinopithecus_bieti
ENSONIG00000003531	-	95	51.111	ENSRROG00000028917	FANCM	81	50.821	Rhinopithecus_roxellana
ENSONIG00000003531	-	81	51.028	ENSSBOG00000030882	FANCM	81	50.833	Saimiri_boliviensis_boliviensis
ENSONIG00000003531	-	72	55.501	ENSSHAG00000000507	FANCM	79	56.064	Sarcophilus_harrisii
ENSONIG00000003531	-	90	75.870	ENSSMAG00000019903	-	100	80.964	Scophthalmus_maximus
ENSONIG00000003531	-	71	69.955	ENSSDUG00000016682	-	96	84.885	Seriola_dumerili
ENSONIG00000003531	-	99	69.665	ENSSLDG00000003408	-	93	79.698	Seriola_lalandi_dorsalis
ENSONIG00000003531	-	74	63.306	ENSSARG00000002618	FANCM	63	63.306	Sorex_araneus
ENSONIG00000003531	-	89	49.523	ENSSSCG00000005000	FANCM	81	50.000	Sus_scrofa
ENSONIG00000003531	-	90	79.241	ENSTNIG00000017277	-	92	78.662	Tetraodon_nigroviridis
ENSONIG00000003531	-	89	48.891	ENSTTRG00000006669	FANCM	80	48.698	Tursiops_truncatus
ENSONIG00000003531	-	71	58.501	ENSVPAG00000005763	FANCM	65	63.842	Vicugna_pacos
ENSONIG00000003531	-	99	39.857	ENSVVUG00000000357	FANCM	81	50.481	Vulpes_vulpes
ENSONIG00000003531	-	90	75.858	ENSXMAG00000007702	-	91	76.213	Xiphophorus_maculatus