EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000003772 (Gene tree)
Gene ID: 100697634
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 13055 bases
Position: chrGL831295.1:1358539-1371593
Accession: 100697634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004745	GTP_EFTU	PF00009.27	1e-62	1	1
ENSONIP00000004745	GTP_EFTU_D2	PF03144.25	7e-17	1	1
ENSONIP00000004745	EFG_IV	PF03764.18	4.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004748	-	2247	-	ENSONIP00000004745	748 (aa)	XP_003454860	I3J7A5

Gene Model

Click here to download ENSONIG00000003772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000003772	gfm1	98	33.333	ENSONIG00000011183	gfm2	97	33.461
ENSONIG00000003772	gfm1	73	38.926	ENSONIG00000004840	-	72	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003772	gfm1	97	81.267	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSONIG00000003772	gfm1	92	89.244	ENSAPOG00000016489	gfm1	98	89.244	Acanthochromis_polyacanthus
ENSONIG00000003772	gfm1	98	81.633	ENSAMEG00000013542	GFM1	98	81.633	Ailuropoda_melanoleuca
ENSONIG00000003772	gfm1	98	86.866	ENSACIG00000014465	gfm1	99	86.866	Amphilophus_citrinellus
ENSONIG00000003772	gfm1	100	90.241	ENSAOCG00000006023	gfm1	100	90.241	Amphiprion_ocellaris
ENSONIG00000003772	gfm1	100	90.107	ENSAPEG00000024499	gfm1	100	90.107	Amphiprion_percula
ENSONIG00000003772	gfm1	100	90.909	ENSATEG00000013789	gfm1	100	90.909	Anabas_testudineus
ENSONIG00000003772	gfm1	97	81.379	ENSAPLG00000005022	GFM1	100	81.379	Anas_platyrhynchos
ENSONIG00000003772	gfm1	97	80.276	ENSACAG00000006829	GFM1	98	80.276	Anolis_carolinensis
ENSONIG00000003772	gfm1	100	79.494	ENSANAG00000035983	GFM1	100	79.494	Aotus_nancymaae
ENSONIG00000003772	gfm1	100	98.529	ENSACLG00000016586	gfm1	100	98.529	Astatotilapia_calliptera
ENSONIG00000003772	gfm1	100	85.027	ENSAMXG00000013435	gfm1	98	86.594	Astyanax_mexicanus
ENSONIG00000003772	gfm1	96	82.312	ENSBTAG00000027795	GFM1	95	82.312	Bos_taurus
ENSONIG00000003772	gfm1	94	58.631	WBGene00009246	gfm-1	95	58.287	Caenorhabditis_elegans
ENSONIG00000003772	gfm1	97	82.094	ENSCJAG00000000363	GFM1	97	82.094	Callithrix_jacchus
ENSONIG00000003772	gfm1	96	82.591	ENSCAFG00000009006	GFM1	100	82.249	Canis_familiaris
ENSONIG00000003772	gfm1	99	79.813	ENSCAFG00020005878	GFM1	98	82.591	Canis_lupus_dingo
ENSONIG00000003772	gfm1	96	82.451	ENSCHIG00000015220	GFM1	95	82.451	Capra_hircus
ENSONIG00000003772	gfm1	100	79.416	ENSTSYG00000002013	GFM1	100	79.416	Carlito_syrichta
ENSONIG00000003772	gfm1	96	71.547	ENSCAPG00000005699	GFM1	97	71.547	Cavia_aperea
ENSONIG00000003772	gfm1	100	79.310	ENSCPOG00000001194	GFM1	100	79.310	Cavia_porcellus
ENSONIG00000003772	gfm1	100	79.603	ENSCCAG00000025561	GFM1	100	79.603	Cebus_capucinus
ENSONIG00000003772	gfm1	100	79.627	ENSCATG00000037622	GFM1	100	79.627	Cercocebus_atys
ENSONIG00000003772	gfm1	97	80.303	ENSCLAG00000002503	GFM1	96	80.303	Chinchilla_lanigera
ENSONIG00000003772	gfm1	100	79.627	ENSCSAG00000012162	GFM1	100	79.627	Chlorocebus_sabaeus
ENSONIG00000003772	gfm1	100	71.220	ENSCHOG00000004867	GFM1	100	71.220	Choloepus_hoffmanni
ENSONIG00000003772	gfm1	100	80.374	ENSCPBG00000018367	GFM1	99	80.374	Chrysemys_picta_bellii
ENSONIG00000003772	gfm1	94	60.000	ENSCING00000011960	-	92	60.000	Ciona_intestinalis
ENSONIG00000003772	gfm1	94	60.653	ENSCSAVG00000008514	-	99	59.829	Ciona_savignyi
ENSONIG00000003772	gfm1	97	81.405	ENSCANG00000031714	GFM1	100	79.627	Colobus_angolensis_palliatus
ENSONIG00000003772	gfm1	100	79.388	ENSCGRG00001022095	GFM1	100	79.388	Cricetulus_griseus_chok1gshd
ENSONIG00000003772	gfm1	100	79.388	ENSCGRG00000012043	GFM1	100	79.388	Cricetulus_griseus_crigri
ENSONIG00000003772	gfm1	97	83.679	ENSCSEG00000017088	gfm1	99	83.679	Cynoglossus_semilaevis
ENSONIG00000003772	gfm1	100	93.583	ENSCVAG00000004126	gfm1	100	93.583	Cyprinodon_variegatus
ENSONIG00000003772	gfm1	100	82.487	ENSDARG00000063624	gfm1	100	82.487	Danio_rerio
ENSONIG00000003772	gfm1	55	79.707	ENSDNOG00000016385	-	100	79.707	Dasypus_novemcinctus
ENSONIG00000003772	gfm1	100	78.752	ENSDORG00000014165	Gfm1	100	78.752	Dipodomys_ordii
ENSONIG00000003772	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSONIG00000003772	gfm1	96	74.064	ENSETEG00000019197	GFM1	95	74.064	Echinops_telfairi
ENSONIG00000003772	gfm1	90	62.963	ENSEBUG00000012794	gfm1	100	62.963	Eptatretus_burgeri
ENSONIG00000003772	gfm1	96	61.250	ENSEEUG00000000429	GFM1	99	61.250	Erinaceus_europaeus
ENSONIG00000003772	gfm1	100	85.829	ENSELUG00000014728	gfm1	100	85.829	Esox_lucius
ENSONIG00000003772	gfm1	97	81.680	ENSFCAG00000013291	GFM1	96	81.680	Felis_catus
ENSONIG00000003772	gfm1	90	81.185	ENSFALG00000007619	GFM1	100	81.185	Ficedula_albicollis
ENSONIG00000003772	gfm1	100	79.045	ENSFDAG00000016559	GFM1	100	79.045	Fukomys_damarensis
ENSONIG00000003772	gfm1	100	92.513	ENSFHEG00000006091	gfm1	100	92.513	Fundulus_heteroclitus
ENSONIG00000003772	gfm1	97	86.657	ENSGMOG00000010161	gfm1	100	86.657	Gadus_morhua
ENSONIG00000003772	gfm1	97	81.103	ENSGALG00000009634	GFM1	98	81.103	Gallus_gallus
ENSONIG00000003772	gfm1	100	91.176	ENSGAFG00000012527	gfm1	100	91.176	Gambusia_affinis
ENSONIG00000003772	gfm1	100	90.254	ENSGACG00000009864	gfm1	100	90.254	Gasterosteus_aculeatus
ENSONIG00000003772	gfm1	97	81.543	ENSGGOG00000003085	GFM1	100	79.627	Gorilla_gorilla
ENSONIG00000003772	gfm1	100	98.663	ENSHBUG00000002120	gfm1	100	98.663	Haplochromis_burtoni
ENSONIG00000003772	gfm1	97	80.716	ENSHGLG00000016855	GFM1	100	78.647	Heterocephalus_glaber_female
ENSONIG00000003772	gfm1	97	80.716	ENSHGLG00100013049	GFM1	100	78.647	Heterocephalus_glaber_male
ENSONIG00000003772	gfm1	100	89.840	ENSHCOG00000007638	gfm1	100	89.840	Hippocampus_comes
ENSONIG00000003772	gfm1	100	84.626	ENSIPUG00000005873	gfm1	100	84.626	Ictalurus_punctatus
ENSONIG00000003772	gfm1	99	78.898	ENSSTOG00000010150	GFM1	100	78.898	Ictidomys_tridecemlineatus
ENSONIG00000003772	gfm1	97	80.828	ENSJJAG00000016447	Gfm1	97	80.828	Jaculus_jaculus
ENSONIG00000003772	gfm1	100	87.968	ENSKMAG00000020768	gfm1	100	87.968	Kryptolebias_marmoratus
ENSONIG00000003772	gfm1	94	91.726	ENSLBEG00000021315	gfm1	100	91.726	Labrus_bergylta
ENSONIG00000003772	gfm1	100	80.214	ENSLACG00000012295	GFM1	100	80.214	Latimeria_chalumnae
ENSONIG00000003772	gfm1	97	80.575	ENSLOCG00000003778	gfm1	100	80.575	Lepisosteus_oculatus
ENSONIG00000003772	gfm1	99	77.467	ENSLAFG00000010945	GFM1	99	78.611	Loxodonta_africana
ENSONIG00000003772	gfm1	97	81.405	ENSMFAG00000035731	GFM1	97	81.405	Macaca_fascicularis
ENSONIG00000003772	gfm1	97	81.405	ENSMMUG00000004961	GFM1	97	81.405	Macaca_mulatta
ENSONIG00000003772	gfm1	100	79.494	ENSMNEG00000033245	GFM1	100	79.494	Macaca_nemestrina
ENSONIG00000003772	gfm1	97	79.724	ENSMLEG00000030908	GFM1	99	79.459	Mandrillus_leucophaeus
ENSONIG00000003772	gfm1	100	91.176	ENSMAMG00000011760	gfm1	100	91.176	Mastacembelus_armatus
ENSONIG00000003772	gfm1	100	98.663	ENSMZEG00005016639	gfm1	100	98.663	Maylandia_zebra
ENSONIG00000003772	gfm1	97	81.077	ENSMGAG00000010641	GFM1	97	81.077	Meleagris_gallopavo
ENSONIG00000003772	gfm1	97	81.931	ENSMAUG00000000611	Gfm1	97	81.931	Mesocricetus_auratus
ENSONIG00000003772	gfm1	97	82.369	ENSMICG00000049086	GFM1	96	82.369	Microcebus_murinus
ENSONIG00000003772	gfm1	96	82.476	ENSMOCG00000000465	Gfm1	96	82.476	Microtus_ochrogaster
ENSONIG00000003772	gfm1	99	90.270	ENSMMOG00000012538	gfm1	99	90.270	Mola_mola
ENSONIG00000003772	gfm1	99	80.597	ENSMODG00000015673	GFM1	99	80.597	Monodelphis_domestica
ENSONIG00000003772	gfm1	96	89.819	ENSMALG00000012508	gfm1	95	89.819	Monopterus_albus
ENSONIG00000003772	gfm1	96	82.287	MGP_CAROLIEiJ_G0025052	Gfm1	95	82.287	Mus_caroli
ENSONIG00000003772	gfm1	96	82.287	ENSMUSG00000027774	Gfm1	95	82.287	Mus_musculus
ENSONIG00000003772	gfm1	97	81.517	MGP_PahariEiJ_G0026495	Gfm1	97	81.517	Mus_pahari
ENSONIG00000003772	gfm1	96	82.287	MGP_SPRETEiJ_G0025994	Gfm1	95	82.287	Mus_spretus
ENSONIG00000003772	gfm1	97	81.818	ENSMPUG00000002859	GFM1	96	81.818	Mustela_putorius_furo
ENSONIG00000003772	gfm1	97	82.231	ENSMLUG00000000452	GFM1	96	82.231	Myotis_lucifugus
ENSONIG00000003772	gfm1	100	78.249	ENSNGAG00000012375	Gfm1	100	78.249	Nannospalax_galili
ENSONIG00000003772	gfm1	97	97.940	ENSNBRG00000004631	gfm1	99	97.940	Neolamprologus_brichardi
ENSONIG00000003772	gfm1	97	81.543	ENSNLEG00000004176	GFM1	100	79.627	Nomascus_leucogenys
ENSONIG00000003772	gfm1	91	72.647	ENSMEUG00000007784	GFM1	99	72.647	Notamacropus_eugenii
ENSONIG00000003772	gfm1	98	80.518	ENSOPRG00000009860	GFM1	99	80.518	Ochotona_princeps
ENSONIG00000003772	gfm1	97	81.405	ENSODEG00000004316	GFM1	100	79.310	Octodon_degus
ENSONIG00000003772	gfm1	97	82.005	ENSOCUG00000013561	GFM1	97	82.005	Oryctolagus_cuniculus
ENSONIG00000003772	gfm1	95	91.525	ENSORLG00000006487	gfm1	100	91.525	Oryzias_latipes
ENSONIG00000003772	gfm1	100	90.241	ENSORLG00020003362	gfm1	100	90.241	Oryzias_latipes_hni
ENSONIG00000003772	gfm1	100	90.374	ENSORLG00015005829	gfm1	100	90.374	Oryzias_latipes_hsok
ENSONIG00000003772	gfm1	100	92.380	ENSOMEG00000012894	gfm1	100	92.380	Oryzias_melastigma
ENSONIG00000003772	gfm1	97	81.129	ENSOGAG00000008298	GFM1	96	81.129	Otolemur_garnettii
ENSONIG00000003772	gfm1	96	81.553	ENSOARG00000002409	GFM1	99	81.553	Ovis_aries
ENSONIG00000003772	gfm1	97	81.543	ENSPPAG00000033881	GFM1	100	79.627	Pan_paniscus
ENSONIG00000003772	gfm1	97	81.680	ENSPPRG00000009281	GFM1	96	81.680	Panthera_pardus
ENSONIG00000003772	gfm1	97	81.543	ENSPTIG00000012416	GFM1	96	81.543	Panthera_tigris_altaica
ENSONIG00000003772	gfm1	97	81.543	ENSPTRG00000015570	GFM1	100	79.627	Pan_troglodytes
ENSONIG00000003772	gfm1	100	79.494	ENSPANG00000016512	GFM1	100	79.494	Papio_anubis
ENSONIG00000003772	gfm1	100	83.556	ENSPKIG00000004876	gfm1	100	83.556	Paramormyrops_kingsleyae
ENSONIG00000003772	gfm1	100	81.308	ENSPSIG00000012567	GFM1	99	81.308	Pelodiscus_sinensis
ENSONIG00000003772	gfm1	97	88.276	ENSPMGG00000014068	gfm1	100	88.276	Periophthalmus_magnuspinnatus
ENSONIG00000003772	gfm1	100	79.494	ENSPEMG00000008942	Gfm1	100	79.494	Peromyscus_maniculatus_bairdii
ENSONIG00000003772	gfm1	86	78.125	ENSPCIG00000020195	GFM1	98	79.491	Phascolarctos_cinereus
ENSONIG00000003772	gfm1	100	91.845	ENSPFOG00000011022	gfm1	100	91.845	Poecilia_formosa
ENSONIG00000003772	gfm1	97	92.680	ENSPLAG00000019585	gfm1	100	91.433	Poecilia_latipinna
ENSONIG00000003772	gfm1	100	91.711	ENSPMEG00000012376	gfm1	100	91.711	Poecilia_mexicana
ENSONIG00000003772	gfm1	100	91.711	ENSPREG00000001332	gfm1	95	91.711	Poecilia_reticulata
ENSONIG00000003772	gfm1	97	81.267	ENSPPYG00000014244	GFM1	100	79.361	Pongo_abelii
ENSONIG00000003772	gfm1	94	80.228	ENSPCAG00000008934	GFM1	100	80.228	Procavia_capensis
ENSONIG00000003772	gfm1	97	81.680	ENSPCOG00000022259	GFM1	96	81.680	Propithecus_coquereli
ENSONIG00000003772	gfm1	97	80.992	ENSPVAG00000013605	GFM1	96	80.992	Pteropus_vampyrus
ENSONIG00000003772	gfm1	100	98.396	ENSPNYG00000006037	gfm1	100	98.396	Pundamilia_nyererei
ENSONIG00000003772	gfm1	100	84.893	ENSPNAG00000001237	gfm1	100	84.893	Pygocentrus_nattereri
ENSONIG00000003772	gfm1	97	81.655	ENSRNOG00000012873	Gfm1	97	81.655	Rattus_norvegicus
ENSONIG00000003772	gfm1	97	81.267	ENSRBIG00000031363	GFM1	100	79.494	Rhinopithecus_bieti
ENSONIG00000003772	gfm1	97	81.405	ENSRROG00000031081	GFM1	100	79.627	Rhinopithecus_roxellana
ENSONIG00000003772	gfm1	96	55.463	YLR069C	-	94	55.463	Saccharomyces_cerevisiae
ENSONIG00000003772	gfm1	97	81.818	ENSSBOG00000023252	GFM1	97	81.818	Saimiri_boliviensis_boliviensis
ENSONIG00000003772	gfm1	98	81.905	ENSSHAG00000017772	GFM1	98	81.905	Sarcophilus_harrisii
ENSONIG00000003772	gfm1	100	84.112	ENSSFOG00015003117	gfm1	100	84.112	Scleropages_formosus
ENSONIG00000003772	gfm1	100	89.439	ENSSMAG00000013221	gfm1	100	89.439	Scophthalmus_maximus
ENSONIG00000003772	gfm1	100	92.914	ENSSDUG00000018665	gfm1	100	92.914	Seriola_dumerili
ENSONIG00000003772	gfm1	100	92.781	ENSSLDG00000020606	gfm1	100	92.781	Seriola_lalandi_dorsalis
ENSONIG00000003772	gfm1	97	79.310	ENSSPUG00000018686	GFM1	98	79.310	Sphenodon_punctatus
ENSONIG00000003772	gfm1	100	93.048	ENSSPAG00000008800	gfm1	100	93.048	Stegastes_partitus
ENSONIG00000003772	gfm1	96	81.894	ENSSSCG00000025651	GFM1	95	81.894	Sus_scrofa
ENSONIG00000003772	gfm1	100	88.102	ENSTRUG00000009244	gfm1	100	88.102	Takifugu_rubripes
ENSONIG00000003772	gfm1	100	90.775	ENSTNIG00000007729	gfm1	100	90.775	Tetraodon_nigroviridis
ENSONIG00000003772	gfm1	90	73.481	ENSTBEG00000017404	GFM1	89	73.481	Tupaia_belangeri
ENSONIG00000003772	gfm1	96	82.173	ENSTTRG00000001735	GFM1	95	82.173	Tursiops_truncatus
ENSONIG00000003772	gfm1	97	81.956	ENSUAMG00000026381	GFM1	96	81.956	Ursus_americanus
ENSONIG00000003772	gfm1	97	81.956	ENSUMAG00000011268	GFM1	96	81.956	Ursus_maritimus
ENSONIG00000003772	gfm1	97	78.345	ENSVPAG00000009444	GFM1	96	78.345	Vicugna_pacos
ENSONIG00000003772	gfm1	96	82.402	ENSVVUG00000020091	GFM1	100	81.953	Vulpes_vulpes
ENSONIG00000003772	gfm1	100	81.516	ENSXETG00000032551	GFM1	100	81.516	Xenopus_tropicalis
ENSONIG00000003772	gfm1	54	89.630	ENSXCOG00000012590	gfm1	93	89.630	Xiphophorus_couchianus
ENSONIG00000003772	gfm1	100	91.578	ENSXMAG00000000261	gfm1	100	91.578	Xiphophorus_maculatus