EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000003788 (Gene tree)
Gene ID: 100697901
Gene Symbol: srprb
Alias: -
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 8411 bases
Position: chrGL831295.1:1377954-1386364
Accession: ZDB-GENE-040718-311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004764	MMR_HSR1	PF01926.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004767	-	5846	-	ENSONIP00000004764	336 (aa)	-	I3J7C4

Gene Model

Click here to download ENSONIG00000003788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000003788	srprb	51	30.994	ENSONIG00000018115	arf2b	87	30.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003788	srprb	82	90.614	ENSAPOG00000021219	srprb	100	90.614	Acanthochromis_polyacanthus
ENSONIG00000003788	srprb	79	94.361	ENSACIG00000014621	srprb	100	94.361	Amphilophus_citrinellus
ENSONIG00000003788	srprb	82	90.614	ENSAOCG00000017265	srprb	100	90.614	Amphiprion_ocellaris
ENSONIG00000003788	srprb	88	88.514	ENSAPEG00000024541	srprb	95	88.514	Amphiprion_percula
ENSONIG00000003788	srprb	82	87.636	ENSATEG00000014016	srprb	100	87.636	Anabas_testudineus
ENSONIG00000003788	srprb	82	98.188	ENSACLG00000016748	srprb	100	98.188	Astatotilapia_calliptera
ENSONIG00000003788	srprb	79	71.970	ENSAMXG00000044118	srprb	99	71.970	Astyanax_mexicanus
ENSONIG00000003788	srprb	82	85.455	ENSCSEG00000017194	srprb	100	85.455	Cynoglossus_semilaevis
ENSONIG00000003788	srprb	79	87.121	ENSCVAG00000004221	srprb	99	87.121	Cyprinodon_variegatus
ENSONIG00000003788	srprb	79	69.697	ENSDARG00000030949	srprb	99	69.697	Danio_rerio
ENSONIG00000003788	srprb	79	79.699	ENSELUG00000009740	srprb	98	79.699	Esox_lucius
ENSONIG00000003788	srprb	79	88.346	ENSFHEG00000006004	srprb	100	88.346	Fundulus_heteroclitus
ENSONIG00000003788	srprb	81	81.181	ENSGMOG00000002081	srprb	100	81.181	Gadus_morhua
ENSONIG00000003788	srprb	79	86.742	ENSGAFG00000012593	srprb	99	86.742	Gambusia_affinis
ENSONIG00000003788	srprb	81	88.192	ENSGACG00000009891	srprb	100	88.192	Gasterosteus_aculeatus
ENSONIG00000003788	srprb	82	98.188	ENSHBUG00000002145	srprb	100	98.188	Haplochromis_burtoni
ENSONIG00000003788	srprb	80	81.784	ENSHCOG00000007732	srprb	99	81.784	Hippocampus_comes
ENSONIG00000003788	srprb	75	69.048	ENSIPUG00000004177	srprb	94	69.048	Ictalurus_punctatus
ENSONIG00000003788	srprb	79	83.835	ENSKMAG00000020736	srprb	100	83.835	Kryptolebias_marmoratus
ENSONIG00000003788	srprb	82	88.000	ENSLBEG00000021483	srprb	100	88.000	Labrus_bergylta
ENSONIG00000003788	srprb	89	66.667	ENSLOCG00000009740	srprb	99	67.000	Lepisosteus_oculatus
ENSONIG00000003788	srprb	82	88.000	ENSMAMG00000011876	srprb	100	88.000	Mastacembelus_armatus
ENSONIG00000003788	srprb	77	97.683	ENSMZEG00005016621	srprb	100	97.683	Maylandia_zebra
ENSONIG00000003788	srprb	81	87.085	ENSMMOG00000012550	srprb	100	87.085	Mola_mola
ENSONIG00000003788	srprb	82	87.273	ENSMALG00000012595	srprb	100	87.273	Monopterus_albus
ENSONIG00000003788	srprb	61	99.029	ENSNBRG00000004699	srprb	88	99.029	Neolamprologus_brichardi
ENSONIG00000003788	srprb	81	79.779	ENSORLG00000006430	srprb	99	79.779	Oryzias_latipes
ENSONIG00000003788	srprb	82	79.636	ENSORLG00020003413	srprb	100	79.636	Oryzias_latipes_hni
ENSONIG00000003788	srprb	82	79.636	ENSORLG00015000166	srprb	100	79.636	Oryzias_latipes_hsok
ENSONIG00000003788	srprb	82	81.455	ENSOMEG00000012735	srprb	100	81.455	Oryzias_melastigma
ENSONIG00000003788	srprb	74	71.713	ENSPKIG00000013147	srprb	95	71.713	Paramormyrops_kingsleyae
ENSONIG00000003788	srprb	82	81.455	ENSPMGG00000014061	srprb	100	81.455	Periophthalmus_magnuspinnatus
ENSONIG00000003788	srprb	79	87.500	ENSPFOG00000011347	srprb	96	87.500	Poecilia_formosa
ENSONIG00000003788	srprb	77	87.984	ENSPLAG00000001156	srprb	100	87.984	Poecilia_latipinna
ENSONIG00000003788	srprb	77	87.597	ENSPMEG00000012169	srprb	100	87.597	Poecilia_mexicana
ENSONIG00000003788	srprb	77	86.822	ENSPREG00000001449	srprb	100	86.822	Poecilia_reticulata
ENSONIG00000003788	srprb	82	98.188	ENSPNYG00000005911	srprb	100	98.188	Pundamilia_nyererei
ENSONIG00000003788	srprb	79	72.348	ENSPNAG00000009983	srprb	99	72.348	Pygocentrus_nattereri
ENSONIG00000003788	srprb	75	74.409	ENSSFOG00015019355	srprb	95	74.409	Scleropages_formosus
ENSONIG00000003788	srprb	82	88.000	ENSSMAG00000013202	srprb	100	88.000	Scophthalmus_maximus
ENSONIG00000003788	srprb	84	89.007	ENSSDUG00000018746	srprb	96	89.007	Seriola_dumerili
ENSONIG00000003788	srprb	82	90.182	ENSSLDG00000020560	srprb	100	90.182	Seriola_lalandi_dorsalis
ENSONIG00000003788	srprb	82	90.614	ENSSPAG00000008898	srprb	100	90.614	Stegastes_partitus
ENSONIG00000003788	srprb	82	85.455	ENSTRUG00000022463	srprb	100	85.455	Takifugu_rubripes
ENSONIG00000003788	srprb	78	82.824	ENSTNIG00000007725	srprb	100	82.824	Tetraodon_nigroviridis
ENSONIG00000003788	srprb	77	87.984	ENSXCOG00000012585	srprb	100	87.984	Xiphophorus_couchianus
ENSONIG00000003788	srprb	77	87.597	ENSXMAG00000028725	srprb	100	87.597	Xiphophorus_maculatus