EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000003803 (Gene tree)
Gene ID: 100710137
Gene Symbol: pus1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3946 bases
Position: chrGL831163.1:2132691-2136636
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004783	PseudoU_synth_1	PF01416.20	3.5e-16	1	1
ENSONIP00000004782	PseudoU_synth_1	PF01416.20	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004785	-	2132	-	ENSONIP00000004782	354 (aa)	-	I3J7E2
ENSONIT00000004786	-	1194	-	ENSONIP00000004783	397 (aa)	-	I3J7E3

Gene Model

Click here to download ENSONIG00000003803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003803	pus1	94	68.468	ENSG00000177192	PUS1	88	70.520	Homo_sapiens
ENSONIG00000003803	pus1	99	85.354	ENSAPOG00000007254	pus1	93	85.354	Acanthochromis_polyacanthus
ENSONIG00000003803	pus1	86	72.368	ENSAMEG00000013715	PUS1	83	69.741	Ailuropoda_melanoleuca
ENSONIG00000003803	pus1	99	90.404	ENSACIG00000009169	pus1	94	90.404	Amphilophus_citrinellus
ENSONIG00000003803	pus1	99	85.859	ENSAOCG00000022207	pus1	93	85.859	Amphiprion_ocellaris
ENSONIG00000003803	pus1	99	85.606	ENSAPEG00000006039	pus1	99	85.606	Amphiprion_percula
ENSONIG00000003803	pus1	99	84.343	ENSATEG00000020688	pus1	100	84.343	Anabas_testudineus
ENSONIG00000003803	pus1	86	74.342	ENSACAG00000007367	PUS1	94	70.112	Anolis_carolinensis
ENSONIG00000003803	pus1	86	72.039	ENSANAG00000036192	PUS1	100	67.771	Aotus_nancymaae
ENSONIG00000003803	pus1	100	96.222	ENSACLG00000020868	pus1	100	96.212	Astatotilapia_calliptera
ENSONIG00000003803	pus1	100	72.431	ENSAMXG00000008710	pus1	90	72.431	Astyanax_mexicanus
ENSONIG00000003803	pus1	87	71.429	ENSBTAG00000012990	PUS1	86	69.429	Bos_taurus
ENSONIG00000003803	pus1	88	38.187	WBGene00004248	pus-1	85	38.187	Caenorhabditis_elegans
ENSONIG00000003803	pus1	72	70.196	ENSCJAG00000003720	PUS1	70	69.884	Callithrix_jacchus
ENSONIG00000003803	pus1	94	68.468	ENSCAFG00000006429	PUS1	85	70.145	Canis_familiaris
ENSONIG00000003803	pus1	94	68.468	ENSCAFG00020010737	PUS1	81	68.144	Canis_lupus_dingo
ENSONIG00000003803	pus1	86	72.039	ENSCHIG00000000487	PUS1	86	69.143	Capra_hircus
ENSONIG00000003803	pus1	85	73.333	ENSTSYG00000032605	PUS1	99	66.578	Carlito_syrichta
ENSONIG00000003803	pus1	84	72.575	ENSCAPG00000006421	PUS1	94	72.039	Cavia_aperea
ENSONIG00000003803	pus1	85	72.667	ENSCPOG00000001027	PUS1	80	69.855	Cavia_porcellus
ENSONIG00000003803	pus1	87	71.197	ENSCCAG00000015879	PUS1	85	71.845	Cebus_capucinus
ENSONIG00000003803	pus1	90	70.440	ENSCATG00000032870	PUS1	84	72.168	Cercocebus_atys
ENSONIG00000003803	pus1	85	71.333	ENSCLAG00000011689	PUS1	87	64.973	Chinchilla_lanigera
ENSONIG00000003803	pus1	88	71.246	ENSCSAG00000001879	PUS1	79	70.809	Chlorocebus_sabaeus
ENSONIG00000003803	pus1	90	71.473	ENSCPBG00000024715	PUS1	93	69.578	Chrysemys_picta_bellii
ENSONIG00000003803	pus1	87	46.104	ENSCING00000009426	-	91	44.540	Ciona_intestinalis
ENSONIG00000003803	pus1	95	39.844	ENSCSAVG00000003751	-	78	39.844	Ciona_savignyi
ENSONIG00000003803	pus1	93	59.756	ENSCANG00000035561	PUS1	90	62.275	Colobus_angolensis_palliatus
ENSONIG00000003803	pus1	93	66.845	ENSCGRG00001019592	Pus1	87	66.845	Cricetulus_griseus_chok1gshd
ENSONIG00000003803	pus1	93	66.845	ENSCGRG00000004048	Pus1	93	66.845	Cricetulus_griseus_crigri
ENSONIG00000003803	pus1	100	77.834	ENSCSEG00000003629	pus1	93	77.834	Cynoglossus_semilaevis
ENSONIG00000003803	pus1	100	83.123	ENSCVAG00000001265	pus1	93	83.123	Cyprinodon_variegatus
ENSONIG00000003803	pus1	89	73.968	ENSDARG00000045562	pus1	97	75.824	Danio_rerio
ENSONIG00000003803	pus1	90	68.553	ENSDNOG00000045576	PUS1	93	71.382	Dasypus_novemcinctus
ENSONIG00000003803	pus1	88	70.192	ENSDORG00000011455	Pus1	99	67.781	Dipodomys_ordii
ENSONIG00000003803	pus1	96	43.188	FBgn0038811	PUS1	85	43.188	Drosophila_melanogaster
ENSONIG00000003803	pus1	85	73.000	ENSETEG00000019160	PUS1	84	69.540	Echinops_telfairi
ENSONIG00000003803	pus1	93	42.602	ENSEBUG00000000368	-	69	42.494	Eptatretus_burgeri
ENSONIG00000003803	pus1	93	66.756	ENSEASG00005016535	PUS1	85	66.756	Equus_asinus_asinus
ENSONIG00000003803	pus1	93	66.756	ENSECAG00000006965	PUS1	92	66.756	Equus_caballus
ENSONIG00000003803	pus1	98	74.566	ENSELUG00000010424	pus1	96	75.196	Esox_lucius
ENSONIG00000003803	pus1	91	67.778	ENSFCAG00000010780	PUS1	82	67.778	Felis_catus
ENSONIG00000003803	pus1	96	67.003	ENSFALG00000008273	PUS1	92	67.003	Ficedula_albicollis
ENSONIG00000003803	pus1	86	71.803	ENSFDAG00000012518	PUS1	84	67.324	Fukomys_damarensis
ENSONIG00000003803	pus1	99	86.111	ENSFHEG00000010504	pus1	93	86.111	Fundulus_heteroclitus
ENSONIG00000003803	pus1	100	73.552	ENSGMOG00000008143	pus1	99	73.552	Gadus_morhua
ENSONIG00000003803	pus1	99	65.829	ENSGALG00000002354	PUS1	96	65.829	Gallus_gallus
ENSONIG00000003803	pus1	100	85.390	ENSGAFG00000006578	pus1	94	85.390	Gambusia_affinis
ENSONIG00000003803	pus1	99	81.658	ENSGACG00000017566	pus1	99	81.658	Gasterosteus_aculeatus
ENSONIG00000003803	pus1	93	68.997	ENSGAGG00000016730	-	94	68.563	Gopherus_agassizii
ENSONIG00000003803	pus1	93	68.598	ENSGGOG00000009178	PUS1	82	72.816	Gorilla_gorilla
ENSONIG00000003803	pus1	100	96.725	ENSHBUG00000001316	pus1	100	96.717	Haplochromis_burtoni
ENSONIG00000003803	pus1	86	68.852	ENSHGLG00000016086	PUS1	87	66.957	Heterocephalus_glaber_female
ENSONIG00000003803	pus1	86	68.525	ENSHGLG00100019362	PUS1	87	66.667	Heterocephalus_glaber_male
ENSONIG00000003803	pus1	100	77.834	ENSHCOG00000014288	pus1	90	77.834	Hippocampus_comes
ENSONIG00000003803	pus1	97	75.325	ENSIPUG00000010387	pus1	91	77.151	Ictalurus_punctatus
ENSONIG00000003803	pus1	86	72.131	ENSSTOG00000011245	PUS1	83	68.067	Ictidomys_tridecemlineatus
ENSONIG00000003803	pus1	93	66.307	ENSJJAG00000000088	Pus1	86	66.307	Jaculus_jaculus
ENSONIG00000003803	pus1	100	79.597	ENSKMAG00000012702	pus1	93	79.597	Kryptolebias_marmoratus
ENSONIG00000003803	pus1	100	79.899	ENSLBEG00000002845	pus1	96	79.899	Labrus_bergylta
ENSONIG00000003803	pus1	93	67.576	ENSLACG00000018598	PUS1	95	65.026	Latimeria_chalumnae
ENSONIG00000003803	pus1	90	52.830	ENSLACG00000016044	-	97	54.434	Latimeria_chalumnae
ENSONIG00000003803	pus1	96	69.870	ENSLOCG00000006127	pus1	96	69.870	Lepisosteus_oculatus
ENSONIG00000003803	pus1	88	69.649	ENSLAFG00000028731	PUS1	95	66.852	Loxodonta_africana
ENSONIG00000003803	pus1	93	68.293	ENSMFAG00000041194	PUS1	84	72.492	Macaca_fascicularis
ENSONIG00000003803	pus1	93	68.293	ENSMMUG00000031463	PUS1	87	72.787	Macaca_mulatta
ENSONIG00000003803	pus1	90	70.755	ENSMNEG00000002814	PUS1	84	72.492	Macaca_nemestrina
ENSONIG00000003803	pus1	90	70.755	ENSMLEG00000043560	PUS1	93	72.697	Mandrillus_leucophaeus
ENSONIG00000003803	pus1	99	82.323	ENSMAMG00000007371	pus1	93	82.323	Mastacembelus_armatus
ENSONIG00000003803	pus1	99	96.465	ENSMZEG00005017746	pus1	93	96.465	Maylandia_zebra
ENSONIG00000003803	pus1	90	73.750	ENSMGAG00000001958	PUS1	98	71.951	Meleagris_gallopavo
ENSONIG00000003803	pus1	86	73.026	ENSMAUG00000001482	Pus1	81	70.000	Mesocricetus_auratus
ENSONIG00000003803	pus1	93	68.485	ENSMICG00000030980	PUS1	91	65.775	Microcebus_murinus
ENSONIG00000003803	pus1	92	67.120	ENSMOCG00000022311	Pus1	85	67.120	Microtus_ochrogaster
ENSONIG00000003803	pus1	99	76.263	ENSMMOG00000021022	pus1	99	76.263	Mola_mola
ENSONIG00000003803	pus1	88	70.000	ENSMODG00000015551	PUS1	80	66.484	Monodelphis_domestica
ENSONIG00000003803	pus1	99	82.278	ENSMALG00000013202	pus1	93	82.278	Monopterus_albus
ENSONIG00000003803	pus1	93	67.647	MGP_CAROLIEiJ_G0027551	Pus1	93	67.647	Mus_caroli
ENSONIG00000003803	pus1	93	67.647	ENSMUSG00000029507	Pus1	93	67.647	Mus_musculus
ENSONIG00000003803	pus1	93	67.914	MGP_PahariEiJ_G0024133	Pus1	93	67.914	Mus_pahari
ENSONIG00000003803	pus1	93	67.647	MGP_SPRETEiJ_G0028549	Pus1	93	67.647	Mus_spretus
ENSONIG00000003803	pus1	86	72.697	ENSMPUG00000002314	PUS1	86	69.741	Mustela_putorius_furo
ENSONIG00000003803	pus1	87	71.104	ENSMLUG00000015790	PUS1	99	65.940	Myotis_lucifugus
ENSONIG00000003803	pus1	92	68.207	ENSNGAG00000012976	Pus1	87	67.380	Nannospalax_galili
ENSONIG00000003803	pus1	99	95.455	ENSNBRG00000020502	pus1	100	95.455	Neolamprologus_brichardi
ENSONIG00000003803	pus1	92	65.854	ENSNLEG00000008505	PUS1	93	72.881	Nomascus_leucogenys
ENSONIG00000003803	pus1	86	64.706	ENSMEUG00000002825	PUS1	92	63.112	Notamacropus_eugenii
ENSONIG00000003803	pus1	90	60.063	ENSOPRG00000002701	-	89	60.580	Ochotona_princeps
ENSONIG00000003803	pus1	93	67.477	ENSODEG00000008248	PUS1	89	69.275	Octodon_degus
ENSONIG00000003803	pus1	89	71.019	ENSOANG00000010619	PUS1	88	64.962	Ornithorhynchus_anatinus
ENSONIG00000003803	pus1	79	30.086	ENSOANG00000000406	PUS3	66	30.086	Ornithorhynchus_anatinus
ENSONIG00000003803	pus1	89	69.524	ENSOCUG00000007310	PUS1	74	68.786	Oryctolagus_cuniculus
ENSONIG00000003803	pus1	99	80.506	ENSORLG00000010787	pus1	93	80.506	Oryzias_latipes
ENSONIG00000003803	pus1	99	80.506	ENSORLG00020011483	pus1	93	80.506	Oryzias_latipes_hni
ENSONIG00000003803	pus1	99	80.253	ENSORLG00015023012	pus1	99	80.253	Oryzias_latipes_hsok
ENSONIG00000003803	pus1	97	80.103	ENSOMEG00000022655	pus1	89	80.103	Oryzias_melastigma
ENSONIG00000003803	pus1	85	73.667	ENSOGAG00000008720	PUS1	96	64.660	Otolemur_garnettii
ENSONIG00000003803	pus1	86	71.711	ENSOARG00000013316	PUS1	79	68.857	Ovis_aries
ENSONIG00000003803	pus1	93	68.293	ENSPPAG00000040971	PUS1	90	64.615	Pan_paniscus
ENSONIG00000003803	pus1	91	67.778	ENSPPRG00000015456	PUS1	88	67.778	Panthera_pardus
ENSONIG00000003803	pus1	90	67.787	ENSPTIG00000004201	PUS1	90	67.778	Panthera_tigris_altaica
ENSONIG00000003803	pus1	93	68.293	ENSPTRG00000005643	PUS1	90	64.615	Pan_troglodytes
ENSONIG00000003803	pus1	90	70.755	ENSPANG00000000376	PUS1	84	72.492	Papio_anubis
ENSONIG00000003803	pus1	93	67.655	ENSPKIG00000019369	pus1	87	66.067	Paramormyrops_kingsleyae
ENSONIG00000003803	pus1	95	67.282	ENSPSIG00000016432	PUS1	88	67.016	Pelodiscus_sinensis
ENSONIG00000003803	pus1	99	77.143	ENSPMGG00000004522	pus1	95	79.625	Periophthalmus_magnuspinnatus
ENSONIG00000003803	pus1	93	67.112	ENSPEMG00000013448	Pus1	87	67.112	Peromyscus_maniculatus_bairdii
ENSONIG00000003803	pus1	94	55.090	ENSPMAG00000004636	pus1	99	58.457	Petromyzon_marinus
ENSONIG00000003803	pus1	74	69.582	ENSPCIG00000022609	-	75	60.000	Phascolarctos_cinereus
ENSONIG00000003803	pus1	100	83.879	ENSPFOG00000019669	pus1	94	83.879	Poecilia_formosa
ENSONIG00000003803	pus1	100	83.627	ENSPLAG00000007185	pus1	94	83.627	Poecilia_latipinna
ENSONIG00000003803	pus1	100	83.627	ENSPLAG00000002692	-	94	83.627	Poecilia_latipinna
ENSONIG00000003803	pus1	100	83.627	ENSPMEG00000011115	PUS1	94	83.627	Poecilia_mexicana
ENSONIG00000003803	pus1	100	83.627	ENSPMEG00000006038	pus1	97	83.627	Poecilia_mexicana
ENSONIG00000003803	pus1	100	83.375	ENSPREG00000007231	pus1	99	85.714	Poecilia_reticulata
ENSONIG00000003803	pus1	92	67.480	ENSPPYG00000005132	PUS1	85	67.480	Pongo_abelii
ENSONIG00000003803	pus1	74	66.412	ENSPCAG00000009110	-	64	66.412	Procavia_capensis
ENSONIG00000003803	pus1	90	61.830	ENSPCOG00000015595	PUS1	89	59.673	Propithecus_coquereli
ENSONIG00000003803	pus1	100	96.222	ENSPNYG00000013571	pus1	93	96.222	Pundamilia_nyererei
ENSONIG00000003803	pus1	97	74.093	ENSPNAG00000003938	pus1	88	74.093	Pygocentrus_nattereri
ENSONIG00000003803	pus1	93	67.385	ENSRNOG00000037500	Pus1	86	67.385	Rattus_norvegicus
ENSONIG00000003803	pus1	86	73.115	ENSRBIG00000043177	PUS1	85	72.816	Rhinopithecus_bieti
ENSONIG00000003803	pus1	90	70.662	ENSRROG00000039744	PUS1	89	68.387	Rhinopithecus_roxellana
ENSONIG00000003803	pus1	82	40.260	YPL212C	-	61	38.690	Saccharomyces_cerevisiae
ENSONIG00000003803	pus1	92	67.480	ENSSBOG00000023593	PUS1	93	67.976	Saimiri_boliviensis_boliviensis
ENSONIG00000003803	pus1	98	65.561	ENSSHAG00000013193	PUS1	91	66.931	Sarcophilus_harrisii
ENSONIG00000003803	pus1	94	68.533	ENSSFOG00015003463	pus1	87	67.700	Scleropages_formosus
ENSONIG00000003803	pus1	100	83.879	ENSSMAG00000019075	pus1	93	83.879	Scophthalmus_maximus
ENSONIG00000003803	pus1	100	87.154	ENSSDUG00000007102	pus1	93	87.154	Seriola_dumerili
ENSONIG00000003803	pus1	100	86.650	ENSSLDG00000022850	pus1	93	86.650	Seriola_lalandi_dorsalis
ENSONIG00000003803	pus1	86	62.500	ENSSARG00000008367	PUS1	98	62.500	Sorex_araneus
ENSONIG00000003803	pus1	96	68.490	ENSSPUG00000010009	PUS1	95	68.490	Sphenodon_punctatus
ENSONIG00000003803	pus1	99	85.101	ENSSPAG00000006272	pus1	99	85.101	Stegastes_partitus
ENSONIG00000003803	pus1	87	71.987	ENSSSCG00000009741	PUS1	87	69.122	Sus_scrofa
ENSONIG00000003803	pus1	86	75.410	ENSTGUG00000008068	PUS1	99	73.731	Taeniopygia_guttata
ENSONIG00000003803	pus1	96	76.378	ENSTRUG00000002198	pus1	89	80.571	Takifugu_rubripes
ENSONIG00000003803	pus1	96	74.026	ENSTNIG00000003942	pus1	95	74.805	Tetraodon_nigroviridis
ENSONIG00000003803	pus1	93	66.038	ENSTTRG00000000632	PUS1	86	66.038	Tursiops_truncatus
ENSONIG00000003803	pus1	86	72.368	ENSUAMG00000017197	PUS1	86	69.164	Ursus_americanus
ENSONIG00000003803	pus1	88	70.927	ENSUMAG00000002831	PUS1	95	71.562	Ursus_maritimus
ENSONIG00000003803	pus1	87	71.753	ENSVVUG00000004199	PUS1	86	64.908	Vulpes_vulpes
ENSONIG00000003803	pus1	86	48.710	ENSXETG00000033640	-	99	48.788	Xenopus_tropicalis
ENSONIG00000003803	pus1	93	66.304	ENSXETG00000002030	pus1	90	66.304	Xenopus_tropicalis
ENSONIG00000003803	pus1	100	85.894	ENSXCOG00000004722	pus1	97	87.240	Xiphophorus_couchianus
ENSONIG00000003803	pus1	100	85.642	ENSXMAG00000000988	pus1	94	85.642	Xiphophorus_maculatus