EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000003945 (Gene tree)
Gene ID: 100709775
Gene Symbol: rc3h2
Alias: -
Full Name: roquin-2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 21703 bases
Position: chrGL831163.1:3106512-3128214
Accession: 100709775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000004973	zf-CCCH	PF00642.24	4.9e-06	1	1
ENSONIP00000004972	zf-CCCH	PF00642.24	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000004976	-	3195	-	ENSONIP00000004973	1065 (aa)	-	I3J7Y3
ENSONIT00000004975	-	4187	XM_013270842	ENSONIP00000004972	1152 (aa)	XP_013126293	I3J7Y2

Gene Model

Click here to download ENSONIG00000003945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003945	rc3h2	100	58.605	ENSG00000056586	RC3H2	94	87.973	Homo_sapiens
ENSONIG00000003945	rc3h2	100	88.366	ENSAPOG00000002117	rc3h2	100	88.879	Acanthochromis_polyacanthus
ENSONIG00000003945	rc3h2	100	59.058	ENSAMEG00000006498	RC3H2	91	59.058	Ailuropoda_melanoleuca
ENSONIG00000003945	rc3h2	100	88.356	ENSAPEG00000007757	rc3h2	100	88.870	Amphiprion_percula
ENSONIG00000003945	rc3h2	100	85.714	ENSATEG00000019414	rc3h2	100	85.885	Anabas_testudineus
ENSONIG00000003945	rc3h2	100	60.238	ENSAPLG00000013920	RC3H2	91	60.200	Anas_platyrhynchos
ENSONIG00000003945	rc3h2	100	58.888	ENSANAG00000030862	RC3H2	99	83.891	Aotus_nancymaae
ENSONIG00000003945	rc3h2	100	98.787	ENSACLG00000023136	rc3h2	100	98.787	Astatotilapia_calliptera
ENSONIG00000003945	rc3h2	94	67.780	ENSAMXG00000006778	rc3h2	100	68.133	Astyanax_mexicanus
ENSONIG00000003945	rc3h2	100	59.037	ENSBTAG00000023867	RC3H2	90	65.217	Bos_taurus
ENSONIG00000003945	rc3h2	100	58.888	ENSCJAG00000020050	RC3H2	99	83.891	Callithrix_jacchus
ENSONIG00000003945	rc3h2	100	59.095	ENSCAFG00020015288	RC3H2	94	87.973	Canis_lupus_dingo
ENSONIG00000003945	rc3h2	100	58.856	ENSCHIG00000019319	RC3H2	91	58.765	Capra_hircus
ENSONIG00000003945	rc3h2	92	52.976	ENSCAPG00000017086	RC3H2	93	52.679	Cavia_aperea
ENSONIG00000003945	rc3h2	100	58.877	ENSCPOG00000008511	RC3H2	91	58.877	Cavia_porcellus
ENSONIG00000003945	rc3h2	100	59.016	ENSCCAG00000001404	RC3H2	99	83.891	Cebus_capucinus
ENSONIG00000003945	rc3h2	100	58.696	ENSCATG00000036655	RC3H2	94	87.973	Cercocebus_atys
ENSONIG00000003945	rc3h2	100	58.749	ENSCLAG00000013261	RC3H2	91	58.749	Chinchilla_lanigera
ENSONIG00000003945	rc3h2	88	56.000	ENSCSAG00000013416	RC3H2	90	55.897	Chlorocebus_sabaeus
ENSONIG00000003945	rc3h2	100	59.619	ENSCPBG00000009811	RC3H2	91	59.746	Chrysemys_picta_bellii
ENSONIG00000003945	rc3h2	100	58.696	ENSCANG00000043140	RC3H2	94	87.973	Colobus_angolensis_palliatus
ENSONIG00000003945	rc3h2	100	58.781	ENSCGRG00001010006	Rc3h2	91	59.000	Cricetulus_griseus_chok1gshd
ENSONIG00000003945	rc3h2	91	63.899	ENSCGRG00000009255	Rc3h2	90	64.183	Cricetulus_griseus_crigri
ENSONIG00000003945	rc3h2	100	80.541	ENSCSEG00000017460	rc3h2	100	80.541	Cynoglossus_semilaevis
ENSONIG00000003945	rc3h2	99	79.124	ENSCVAG00000012202	rc3h2	100	78.780	Cyprinodon_variegatus
ENSONIG00000003945	rc3h2	100	62.349	ENSDARG00000063050	rc3h2	100	62.320	Danio_rerio
ENSONIG00000003945	rc3h2	100	58.984	ENSDNOG00000014557	RC3H2	91	58.984	Dasypus_novemcinctus
ENSONIG00000003945	rc3h2	100	58.552	ENSDORG00000006398	Rc3h2	91	58.552	Dipodomys_ordii
ENSONIG00000003945	rc3h2	100	56.506	ENSEASG00005020897	RC3H2	99	79.289	Equus_asinus_asinus
ENSONIG00000003945	rc3h2	100	58.824	ENSECAG00000022176	RC3H2	91	58.824	Equus_caballus
ENSONIG00000003945	rc3h2	100	69.625	ENSELUG00000006105	rc3h2	100	69.761	Esox_lucius
ENSONIG00000003945	rc3h2	100	59.095	ENSFCAG00000007375	RC3H2	91	59.005	Felis_catus
ENSONIG00000003945	rc3h2	100	59.781	ENSFALG00000002011	RC3H2	91	59.745	Ficedula_albicollis
ENSONIG00000003945	rc3h2	100	58.696	ENSFDAG00000012477	RC3H2	91	58.605	Fukomys_damarensis
ENSONIG00000003945	rc3h2	99	79.846	ENSFHEG00000012272	rc3h2	100	79.417	Fundulus_heteroclitus
ENSONIG00000003945	rc3h2	71	69.554	ENSGMOG00000016709	-	100	69.833	Gadus_morhua
ENSONIG00000003945	rc3h2	100	60.603	ENSGALG00000001253	RC3H2	91	60.565	Gallus_gallus
ENSONIG00000003945	rc3h2	96	80.769	ENSGAFG00000007679	rc3h2	100	80.233	Gambusia_affinis
ENSONIG00000003945	rc3h2	77	83.513	ENSGACG00000017369	rc3h2	100	96.606	Gasterosteus_aculeatus
ENSONIG00000003945	rc3h2	100	59.927	ENSGAGG00000018295	RC3H2	98	60.332	Gopherus_agassizii
ENSONIG00000003945	rc3h2	100	58.696	ENSGGOG00000017062	RC3H2	94	87.973	Gorilla_gorilla
ENSONIG00000003945	rc3h2	100	97.834	ENSHBUG00000003976	rc3h2	100	97.834	Haplochromis_burtoni
ENSONIG00000003945	rc3h2	100	58.786	ENSHGLG00100018015	RC3H2	91	58.786	Heterocephalus_glaber_male
ENSONIG00000003945	rc3h2	100	73.942	ENSHCOG00000003006	rc3h2	100	73.689	Hippocampus_comes
ENSONIG00000003945	rc3h2	100	58.333	ENSIPUG00000021433	rc3h2	100	58.945	Ictalurus_punctatus
ENSONIG00000003945	rc3h2	100	58.786	ENSSTOG00000010655	RC3H2	91	58.786	Ictidomys_tridecemlineatus
ENSONIG00000003945	rc3h2	100	58.946	ENSJJAG00000022376	Rc3h2	91	58.946	Jaculus_jaculus
ENSONIG00000003945	rc3h2	100	79.795	ENSKMAG00000010936	rc3h2	100	79.880	Kryptolebias_marmoratus
ENSONIG00000003945	rc3h2	99	58.491	ENSLOCG00000002894	rc3h2	100	57.802	Lepisosteus_oculatus
ENSONIG00000003945	rc3h2	100	59.395	ENSLAFG00000003521	RC3H2	91	59.395	Loxodonta_africana
ENSONIG00000003945	rc3h2	91	87.783	ENSMFAG00000035621	RC3H2	94	87.973	Macaca_fascicularis
ENSONIG00000003945	rc3h2	100	58.733	ENSMMUG00000021134	RC3H2	94	87.973	Macaca_mulatta
ENSONIG00000003945	rc3h2	100	58.696	ENSMNEG00000031599	RC3H2	95	85.177	Macaca_nemestrina
ENSONIG00000003945	rc3h2	100	58.733	ENSMLEG00000033809	RC3H2	94	87.973	Mandrillus_leucophaeus
ENSONIG00000003945	rc3h2	100	97.834	ENSMZEG00005017019	rc3h2	100	97.834	Maylandia_zebra
ENSONIG00000003945	rc3h2	100	60.310	ENSMGAG00000007984	RC3H2	91	60.273	Meleagris_gallopavo
ENSONIG00000003945	rc3h2	82	62.419	ENSMAUG00000003117	Rc3h2	83	62.419	Mesocricetus_auratus
ENSONIG00000003945	rc3h2	100	58.674	ENSMICG00000003227	RC3H2	94	87.751	Microcebus_murinus
ENSONIG00000003945	rc3h2	100	58.401	ENSMOCG00000009592	Rc3h2	91	58.401	Microtus_ochrogaster
ENSONIG00000003945	rc3h2	84	94.861	ENSMMOG00000021305	rc3h2	97	89.567	Mola_mola
ENSONIG00000003945	rc3h2	100	59.132	ENSMODG00000019725	RC3H2	76	59.132	Monodelphis_domestica
ENSONIG00000003945	rc3h2	100	58.296	MGP_CAROLIEiJ_G0023516	Rc3h2	99	84.310	Mus_caroli
ENSONIG00000003945	rc3h2	100	58.621	ENSMUSG00000075376	Rc3h2	99	84.310	Mus_musculus
ENSONIG00000003945	rc3h2	100	59.202	MGP_PahariEiJ_G0024969	Rc3h2	99	84.310	Mus_pahari
ENSONIG00000003945	rc3h2	100	59.021	MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	Mus_spretus
ENSONIG00000003945	rc3h2	100	59.232	ENSMPUG00000014141	RC3H2	91	59.415	Mustela_putorius_furo
ENSONIG00000003945	rc3h2	100	58.829	ENSMLUG00000013992	RC3H2	91	59.049	Myotis_lucifugus
ENSONIG00000003945	rc3h2	100	98.094	ENSNBRG00000009276	rc3h2	100	98.094	Neolamprologus_brichardi
ENSONIG00000003945	rc3h2	100	58.152	ENSNLEG00000017204	RC3H2	94	87.973	Nomascus_leucogenys
ENSONIG00000003945	rc3h2	57	87.747	ENSMEUG00000001299	-	56	87.747	Notamacropus_eugenii
ENSONIG00000003945	rc3h2	86	57.516	ENSOPRG00000000135	RC3H2	88	57.731	Ochotona_princeps
ENSONIG00000003945	rc3h2	99	59.324	ENSOANG00000008194	RC3H2	99	59.415	Ornithorhynchus_anatinus
ENSONIG00000003945	rc3h2	100	59.128	ENSOCUG00000008804	RC3H2	91	59.128	Oryctolagus_cuniculus
ENSONIG00000003945	rc3h2	100	80.805	ENSORLG00000010018	rc3h2	100	80.805	Oryzias_latipes
ENSONIG00000003945	rc3h2	100	80.805	ENSORLG00020013257	rc3h2	100	80.805	Oryzias_latipes_hni
ENSONIG00000003945	rc3h2	100	80.206	ENSORLG00015001525	rc3h2	100	80.805	Oryzias_latipes_hsok
ENSONIG00000003945	rc3h2	100	82.121	ENSOMEG00000023540	rc3h2	100	82.121	Oryzias_melastigma
ENSONIG00000003945	rc3h2	100	59.037	ENSOGAG00000010678	RC3H2	91	59.037	Otolemur_garnettii
ENSONIG00000003945	rc3h2	100	58.946	ENSOARG00000013965	RC3H2	91	58.856	Ovis_aries
ENSONIG00000003945	rc3h2	100	58.696	ENSPPAG00000036013	RC3H2	94	87.973	Pan_paniscus
ENSONIG00000003945	rc3h2	100	59.058	ENSPPRG00000008698	RC3H2	94	61.230	Panthera_pardus
ENSONIG00000003945	rc3h2	100	59.058	ENSPTIG00000014257	RC3H2	94	61.230	Panthera_tigris_altaica
ENSONIG00000003945	rc3h2	100	58.696	ENSPTRG00000021339	RC3H2	94	87.973	Pan_troglodytes
ENSONIG00000003945	rc3h2	100	57.246	ENSPANG00000025840	RC3H2	94	84.410	Papio_anubis
ENSONIG00000003945	rc3h2	99	66.047	ENSPKIG00000021910	rc3h2	96	65.180	Paramormyrops_kingsleyae
ENSONIG00000003945	rc3h2	100	60.164	ENSPSIG00000005393	RC3H2	91	60.291	Pelodiscus_sinensis
ENSONIG00000003945	rc3h2	85	92.105	ENSPMGG00000023963	rc3h2	94	95.260	Periophthalmus_magnuspinnatus
ENSONIG00000003945	rc3h2	100	59.202	ENSPEMG00000023441	Rc3h2	91	59.202	Peromyscus_maniculatus_bairdii
ENSONIG00000003945	rc3h2	91	88.009	ENSPCIG00000025559	RC3H2	90	88.009	Phascolarctos_cinereus
ENSONIG00000003945	rc3h2	97	79.577	ENSPFOG00000019699	rc3h2	98	79.313	Poecilia_formosa
ENSONIG00000003945	rc3h2	93	72.435	ENSPLAG00000005799	rc3h2	100	69.561	Poecilia_latipinna
ENSONIG00000003945	rc3h2	97	79.930	ENSPMEG00000014187	rc3h2	98	79.665	Poecilia_mexicana
ENSONIG00000003945	rc3h2	99	80.207	ENSPREG00000008979	rc3h2	100	79.776	Poecilia_reticulata
ENSONIG00000003945	rc3h2	85	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSONIG00000003945	rc3h2	100	98.960	ENSPNYG00000012063	rc3h2	100	98.960	Pundamilia_nyererei
ENSONIG00000003945	rc3h2	100	60.324	ENSPNAG00000017502	rc3h2	100	62.628	Pygocentrus_nattereri
ENSONIG00000003945	rc3h2	100	59.021	ENSRNOG00000009196	Rc3h2	94	59.021	Rattus_norvegicus
ENSONIG00000003945	rc3h2	100	58.914	ENSRBIG00000032579	RC3H2	94	87.973	Rhinopithecus_bieti
ENSONIG00000003945	rc3h2	100	58.824	ENSRROG00000043784	RC3H2	94	87.973	Rhinopithecus_roxellana
ENSONIG00000003945	rc3h2	100	59.070	ENSSBOG00000029100	RC3H2	99	83.857	Saimiri_boliviensis_boliviensis
ENSONIG00000003945	rc3h2	100	59.186	ENSSHAG00000007498	RC3H2	91	59.276	Sarcophilus_harrisii
ENSONIG00000003945	rc3h2	100	85.520	ENSSMAG00000020048	rc3h2	100	85.520	Scophthalmus_maximus
ENSONIG00000003945	rc3h2	100	88.195	ENSSDUG00000016022	rc3h2	100	88.195	Seriola_dumerili
ENSONIG00000003945	rc3h2	100	88.109	ENSSLDG00000016070	rc3h2	100	88.109	Seriola_lalandi_dorsalis
ENSONIG00000003945	rc3h2	100	58.909	ENSSARG00000012329	RC3H2	91	58.818	Sorex_araneus
ENSONIG00000003945	rc3h2	100	59.263	ENSSPUG00000001457	RC3H2	91	59.479	Sphenodon_punctatus
ENSONIG00000003945	rc3h2	100	89.136	ENSSPAG00000005233	rc3h2	100	89.649	Stegastes_partitus
ENSONIG00000003945	rc3h2	100	58.861	ENSSSCG00000005575	RC3H2	92	87.751	Sus_scrofa
ENSONIG00000003945	rc3h2	100	59.872	ENSTGUG00000006889	-	91	59.836	Taeniopygia_guttata
ENSONIG00000003945	rc3h2	89	73.807	ENSTNIG00000004942	rc3h2	100	73.631	Tetraodon_nigroviridis
ENSONIG00000003945	rc3h2	75	62.754	ENSTBEG00000009622	RC3H2	79	62.919	Tupaia_belangeri
ENSONIG00000003945	rc3h2	94	68.241	ENSTTRG00000016954	RC3H2	84	68.241	Tursiops_truncatus
ENSONIG00000003945	rc3h2	100	59.095	ENSUAMG00000015355	RC3H2	91	59.095	Ursus_americanus
ENSONIG00000003945	rc3h2	100	59.095	ENSUMAG00000003161	RC3H2	94	87.973	Ursus_maritimus
ENSONIG00000003945	rc3h2	100	58.749	ENSVPAG00000005994	RC3H2	91	58.658	Vicugna_pacos
ENSONIG00000003945	rc3h2	100	59.095	ENSVVUG00000009519	RC3H2	94	59.095	Vulpes_vulpes
ENSONIG00000003945	rc3h2	99	67.230	ENSXCOG00000005002	rc3h2	94	97.732	Xiphophorus_couchianus
ENSONIG00000003945	rc3h2	99	80.155	ENSXMAG00000001724	rc3h2	100	79.639	Xiphophorus_maculatus