EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004107 (Gene tree)
Gene ID: 100707900
Gene Symbol: rbm5
Alias: -
Full Name: RNA binding motif protein 5
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 10768 bases
Position: chrGL831197.1:1309099-1319866
Accession: 100707900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005176	zf-RanBP	PF00641.18	2.1e-10	1	1
ENSONIP00000005177	zf-RanBP	PF00641.18	2.6e-10	1	1
ENSONIP00000005176	RRM_1	PF00076.22	8e-14	1	2
ENSONIP00000005176	RRM_1	PF00076.22	8e-14	2	2
ENSONIP00000005177	RRM_1	PF00076.22	1.1e-11	1	2
ENSONIP00000005177	RRM_1	PF00076.22	1.1e-11	2	2
ENSONIP00000005176	G-patch	PF01585.23	2.2e-19	1	1
ENSONIP00000005177	G-patch	PF01585.23	2.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005180	-	4488	-	ENSONIP00000005176	857 (aa)	XP_005453584	I3J8I6
ENSONIT00000005181	-	2715	-	ENSONIP00000005177	905 (aa)	-	I3J8I7

Gene Model

Click here to download ENSONIG00000004107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004107	rbm5	100	62.890	ENSONIG00000019007	RBM5	100	64.046
ENSONIG00000004107	rbm5	89	41.897	ENSONIG00000012370	rbm10	99	46.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004107	rbm5	100	61.432	ENSG00000003756	RBM5	100	61.460	Homo_sapiens
ENSONIG00000004107	rbm5	100	65.625	ENSAPOG00000006011	-	100	65.856	Acanthochromis_polyacanthus
ENSONIG00000004107	rbm5	100	91.599	ENSAPOG00000016625	rbm5	100	91.249	Acanthochromis_polyacanthus
ENSONIG00000004107	rbm5	100	61.432	ENSAMEG00000012005	RBM5	100	61.460	Ailuropoda_melanoleuca
ENSONIG00000004107	rbm5	99	59.907	ENSACIG00000021310	-	90	68.421	Amphilophus_citrinellus
ENSONIG00000004107	rbm5	66	93.867	ENSACIG00000007571	rbm5	100	93.867	Amphilophus_citrinellus
ENSONIG00000004107	rbm5	100	91.385	ENSAOCG00000002880	rbm5	100	91.385	Amphiprion_ocellaris
ENSONIG00000004107	rbm5	99	62.821	ENSAOCG00000017312	-	99	62.821	Amphiprion_ocellaris
ENSONIG00000004107	rbm5	100	66.088	ENSAPEG00000018222	RBM5	100	65.625	Amphiprion_percula
ENSONIG00000004107	rbm5	90	89.793	ENSAPEG00000011862	rbm5	92	89.793	Amphiprion_percula
ENSONIG00000004107	rbm5	100	66.475	ENSATEG00000003838	-	100	66.972	Anabas_testudineus
ENSONIG00000004107	rbm5	100	88.345	ENSATEG00000024663	rbm5	100	88.345	Anabas_testudineus
ENSONIG00000004107	rbm5	93	63.400	ENSAPLG00000011176	RBM5	99	64.153	Anas_platyrhynchos
ENSONIG00000004107	rbm5	100	60.023	ENSACAG00000008580	RBM5	100	60.023	Anolis_carolinensis
ENSONIG00000004107	rbm5	100	61.503	ENSANAG00000025199	RBM5	100	61.574	Aotus_nancymaae
ENSONIG00000004107	rbm5	100	97.666	ENSACLG00000012748	rbm5	100	97.666	Astatotilapia_calliptera
ENSONIG00000004107	rbm5	89	82.927	ENSACLG00000024198	RBM5	100	83.333	Astatotilapia_calliptera
ENSONIG00000004107	rbm5	85	76.438	ENSAMXG00000008146	rbm5	100	76.438	Astyanax_mexicanus
ENSONIG00000004107	rbm5	100	61.316	ENSBTAG00000006330	RBM5	100	61.345	Bos_taurus
ENSONIG00000004107	rbm5	93	69.231	ENSCJAG00000004740	RBM5	100	67.949	Callithrix_jacchus
ENSONIG00000004107	rbm5	100	61.547	ENSCAFG00000010866	RBM5	100	61.574	Canis_familiaris
ENSONIG00000004107	rbm5	100	61.547	ENSCAFG00020022126	RBM5	100	61.574	Canis_lupus_dingo
ENSONIG00000004107	rbm5	100	61.432	ENSCHIG00000018435	RBM5	100	61.460	Capra_hircus
ENSONIG00000004107	rbm5	86	58.902	ENSTSYG00000004158	RBM5	100	59.499	Carlito_syrichta
ENSONIG00000004107	rbm5	93	52.809	ENSCAPG00000013495	RBM5	100	51.208	Cavia_aperea
ENSONIG00000004107	rbm5	100	61.761	ENSCPOG00000008151	RBM5	100	61.574	Cavia_porcellus
ENSONIG00000004107	rbm5	99	61.395	ENSCCAG00000026401	RBM5	100	60.771	Cebus_capucinus
ENSONIG00000004107	rbm5	100	61.547	ENSCATG00000041038	RBM5	100	61.574	Cercocebus_atys
ENSONIG00000004107	rbm5	100	61.993	ENSCLAG00000007873	RBM5	100	61.802	Chinchilla_lanigera
ENSONIG00000004107	rbm5	100	61.547	ENSCSAG00000014401	RBM5	100	61.574	Chlorocebus_sabaeus
ENSONIG00000004107	rbm5	81	54.986	ENSCHOG00000009429	RBM5	85	55.680	Choloepus_hoffmanni
ENSONIG00000004107	rbm5	91	63.112	ENSCPBG00000002406	RBM5	100	61.382	Chrysemys_picta_bellii
ENSONIG00000004107	rbm5	100	60.800	ENSCANG00000031250	RBM5	100	60.661	Colobus_angolensis_palliatus
ENSONIG00000004107	rbm5	100	61.618	ENSCGRG00001010543	Rbm5	100	61.574	Cricetulus_griseus_chok1gshd
ENSONIG00000004107	rbm5	100	61.618	ENSCGRG00000008475	Rbm5	100	61.574	Cricetulus_griseus_crigri
ENSONIG00000004107	rbm5	98	80.801	ENSCSEG00000000596	rbm5	97	83.489	Cynoglossus_semilaevis
ENSONIG00000004107	rbm5	100	80.347	ENSCVAG00000005655	rbm5	100	82.428	Cyprinodon_variegatus
ENSONIG00000004107	rbm5	100	62.243	ENSDARG00000098280	rbm5	100	69.935	Danio_rerio
ENSONIG00000004107	rbm5	100	61.663	ENSDNOG00000011756	RBM5	100	61.574	Dasypus_novemcinctus
ENSONIG00000004107	rbm5	100	61.272	ENSDORG00000007692	Rbm5	100	61.345	Dipodomys_ordii
ENSONIG00000004107	rbm5	91	59.701	ENSETEG00000012773	RBM5	93	60.543	Echinops_telfairi
ENSONIG00000004107	rbm5	73	60.773	ENSEBUG00000017034	rbm5	78	61.538	Eptatretus_burgeri
ENSONIG00000004107	rbm5	100	61.547	ENSEASG00005011835	RBM5	100	61.574	Equus_asinus_asinus
ENSONIG00000004107	rbm5	100	61.547	ENSECAG00000020447	RBM5	100	61.574	Equus_caballus
ENSONIG00000004107	rbm5	80	72.195	ENSEEUG00000005943	RBM5	88	69.756	Erinaceus_europaeus
ENSONIG00000004107	rbm5	100	77.956	ENSELUG00000022467	rbm5	100	77.126	Esox_lucius
ENSONIG00000004107	rbm5	100	61.663	ENSFCAG00000014639	RBM5	100	61.574	Felis_catus
ENSONIG00000004107	rbm5	92	62.765	ENSFALG00000008828	RBM5	90	62.442	Ficedula_albicollis
ENSONIG00000004107	rbm5	100	61.503	ENSFDAG00000001897	RBM5	100	61.168	Fukomys_damarensis
ENSONIG00000004107	rbm5	92	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSONIG00000004107	rbm5	99	71.944	ENSGMOG00000016224	rbm5	100	72.293	Gadus_morhua
ENSONIG00000004107	rbm5	90	61.383	ENSGMOG00000007810	-	95	60.519	Gadus_morhua
ENSONIG00000004107	rbm5	92	63.795	ENSGALG00000039288	RBM5	83	63.985	Gallus_gallus
ENSONIG00000004107	rbm5	100	82.503	ENSGAFG00000010690	rbm5	100	84.589	Gambusia_affinis
ENSONIG00000004107	rbm5	100	81.585	ENSGACG00000010469	rbm5	100	81.490	Gasterosteus_aculeatus
ENSONIG00000004107	rbm5	100	61.609	ENSGACG00000000858	-	100	61.609	Gasterosteus_aculeatus
ENSONIG00000004107	rbm5	87	62.187	ENSGAGG00000007935	RBM5	99	60.427	Gopherus_agassizii
ENSONIG00000004107	rbm5	100	61.547	ENSGGOG00000014490	RBM5	100	61.574	Gorilla_gorilla
ENSONIG00000004107	rbm5	100	98.833	ENSHBUG00000001941	rbm5	100	98.833	Haplochromis_burtoni
ENSONIG00000004107	rbm5	89	82.927	ENSHBUG00000011901	-	100	83.333	Haplochromis_burtoni
ENSONIG00000004107	rbm5	100	61.690	ENSHGLG00000014844	RBM5	100	61.503	Heterocephalus_glaber_female
ENSONIG00000004107	rbm5	100	61.761	ENSHGLG00100010739	RBM5	100	61.574	Heterocephalus_glaber_male
ENSONIG00000004107	rbm5	95	79.197	ENSHCOG00000017110	rbm5	99	79.805	Hippocampus_comes
ENSONIG00000004107	rbm5	100	55.702	ENSHCOG00000004536	-	100	55.266	Hippocampus_comes
ENSONIG00000004107	rbm5	100	74.451	ENSIPUG00000000640	rbm5	100	74.566	Ictalurus_punctatus
ENSONIG00000004107	rbm5	100	61.778	ENSSTOG00000013856	RBM5	100	61.802	Ictidomys_tridecemlineatus
ENSONIG00000004107	rbm5	100	61.894	ENSJJAG00000008844	Rbm5	100	62.030	Jaculus_jaculus
ENSONIG00000004107	rbm5	100	86.496	ENSKMAG00000006663	rbm5	100	86.496	Kryptolebias_marmoratus
ENSONIG00000004107	rbm5	57	63.782	ENSLBEG00000002522	-	84	66.316	Labrus_bergylta
ENSONIG00000004107	rbm5	100	86.279	ENSLBEG00000020858	rbm5	100	87.326	Labrus_bergylta
ENSONIG00000004107	rbm5	100	62.269	ENSLBEG00000010877	-	94	62.269	Labrus_bergylta
ENSONIG00000004107	rbm5	100	70.408	ENSLOCG00000010774	rbm5	100	70.408	Lepisosteus_oculatus
ENSONIG00000004107	rbm5	100	61.201	ENSLAFG00000006733	RBM5	100	61.250	Loxodonta_africana
ENSONIG00000004107	rbm5	100	61.547	ENSMFAG00000031609	RBM5	100	61.574	Macaca_fascicularis
ENSONIG00000004107	rbm5	99	61.440	ENSMMUG00000004921	RBM5	99	61.468	Macaca_mulatta
ENSONIG00000004107	rbm5	100	61.663	ENSMNEG00000044394	RBM5	100	61.688	Macaca_nemestrina
ENSONIG00000004107	rbm5	100	60.603	ENSMLEG00000034689	RBM5	100	61.054	Mandrillus_leucophaeus
ENSONIG00000004107	rbm5	100	88.269	ENSMAMG00000017277	rbm5	99	95.238	Mastacembelus_armatus
ENSONIG00000004107	rbm5	100	67.359	ENSMAMG00000023948	-	100	63.468	Mastacembelus_armatus
ENSONIG00000004107	rbm5	100	61.246	ENSMZEG00005010035	-	100	62.284	Maylandia_zebra
ENSONIG00000004107	rbm5	100	97.666	ENSMZEG00005015328	rbm5	100	97.666	Maylandia_zebra
ENSONIG00000004107	rbm5	92	64.045	ENSMGAG00000003972	RBM5	100	64.179	Meleagris_gallopavo
ENSONIG00000004107	rbm5	99	61.163	ENSMAUG00000020572	Rbm5	98	61.239	Mesocricetus_auratus
ENSONIG00000004107	rbm5	100	61.547	ENSMICG00000016179	RBM5	100	61.574	Microcebus_murinus
ENSONIG00000004107	rbm5	100	62.140	ENSMOCG00000017479	Rbm5	100	61.802	Microtus_ochrogaster
ENSONIG00000004107	rbm5	97	92.216	ENSMMOG00000015342	rbm5	93	92.814	Mola_mola
ENSONIG00000004107	rbm5	99	51.505	ENSMMOG00000021804	-	99	52.425	Mola_mola
ENSONIG00000004107	rbm5	100	61.547	ENSMODG00000012301	RBM5	100	61.460	Monodelphis_domestica
ENSONIG00000004107	rbm5	100	64.129	ENSMALG00000016769	-	100	63.437	Monopterus_albus
ENSONIG00000004107	rbm5	93	81.944	ENSMALG00000000609	rbm5	98	83.333	Monopterus_albus
ENSONIG00000004107	rbm5	100	60.995	MGP_CAROLIEiJ_G0032660	Rbm5	100	63.813	Mus_caroli
ENSONIG00000004107	rbm5	100	60.995	ENSMUSG00000032580	Rbm5	100	63.813	Mus_musculus
ENSONIG00000004107	rbm5	100	61.111	MGP_PahariEiJ_G0015528	Rbm5	100	63.813	Mus_pahari
ENSONIG00000004107	rbm5	100	60.995	MGP_SPRETEiJ_G0033805	Rbm5	100	63.813	Mus_spretus
ENSONIG00000004107	rbm5	100	62.197	ENSMLUG00000007875	RBM5	100	61.986	Myotis_lucifugus
ENSONIG00000004107	rbm5	100	61.175	ENSNGAG00000011777	Rbm5	100	61.345	Nannospalax_galili
ENSONIG00000004107	rbm5	100	98.600	ENSNBRG00000018097	rbm5	100	98.600	Neolamprologus_brichardi
ENSONIG00000004107	rbm5	98	58.926	ENSNBRG00000004400	RBM5	97	60.384	Neolamprologus_brichardi
ENSONIG00000004107	rbm5	100	61.432	ENSNLEG00000006943	RBM5	100	61.460	Nomascus_leucogenys
ENSONIG00000004107	rbm5	83	71.569	ENSMEUG00000012994	RBM5	100	57.405	Notamacropus_eugenii
ENSONIG00000004107	rbm5	91	60.908	ENSOPRG00000015154	RBM5	93	60.247	Ochotona_princeps
ENSONIG00000004107	rbm5	100	59.791	ENSODEG00000019111	-	100	59.242	Octodon_degus
ENSONIG00000004107	rbm5	100	61.645	ENSODEG00000016254	-	100	61.460	Octodon_degus
ENSONIG00000004107	rbm5	88	62.910	ENSOANG00000006557	RBM5	100	61.608	Ornithorhynchus_anatinus
ENSONIG00000004107	rbm5	100	61.085	ENSOCUG00000011652	RBM5	100	61.117	Oryctolagus_cuniculus
ENSONIG00000004107	rbm5	95	82.295	ENSORLG00000003369	rbm5	99	83.394	Oryzias_latipes
ENSONIG00000004107	rbm5	100	57.583	ENSORLG00000001053	-	100	57.029	Oryzias_latipes
ENSONIG00000004107	rbm5	96	56.919	ENSORLG00020006782	-	98	56.438	Oryzias_latipes_hni
ENSONIG00000004107	rbm5	100	82.887	ENSORLG00020021744	rbm5	100	83.935	Oryzias_latipes_hni
ENSONIG00000004107	rbm5	96	56.799	ENSORLG00015002854	-	98	56.318	Oryzias_latipes_hsok
ENSONIG00000004107	rbm5	92	100.000	ENSORLG00015018379	rbm5	99	100.000	Oryzias_latipes_hsok
ENSONIG00000004107	rbm5	100	84.186	ENSOMEG00000002219	rbm5	100	85.000	Oryzias_melastigma
ENSONIG00000004107	rbm5	66	67.708	ENSOMEG00000010653	-	88	66.667	Oryzias_melastigma
ENSONIG00000004107	rbm5	92	62.250	ENSOGAG00000004205	RBM5	100	62.017	Otolemur_garnettii
ENSONIG00000004107	rbm5	100	61.432	ENSOARG00000010923	RBM5	100	61.460	Ovis_aries
ENSONIG00000004107	rbm5	100	61.547	ENSPPAG00000043010	RBM5	100	61.574	Pan_paniscus
ENSONIG00000004107	rbm5	100	61.663	ENSPPRG00000005404	RBM5	100	61.574	Panthera_pardus
ENSONIG00000004107	rbm5	100	61.663	ENSPTIG00000000962	RBM5	100	61.574	Panthera_tigris_altaica
ENSONIG00000004107	rbm5	100	61.547	ENSPTRG00000014946	RBM5	100	61.574	Pan_troglodytes
ENSONIG00000004107	rbm5	100	61.547	ENSPANG00000018507	RBM5	100	61.574	Papio_anubis
ENSONIG00000004107	rbm5	100	70.648	ENSPKIG00000024837	RBM5	100	70.447	Paramormyrops_kingsleyae
ENSONIG00000004107	rbm5	77	57.293	ENSPKIG00000019187	-	100	57.164	Paramormyrops_kingsleyae
ENSONIG00000004107	rbm5	88	62.254	ENSPSIG00000016073	RBM5	100	62.092	Pelodiscus_sinensis
ENSONIG00000004107	rbm5	79	64.023	ENSPMGG00000017347	rbm5	100	64.076	Periophthalmus_magnuspinnatus
ENSONIG00000004107	rbm5	88	82.051	ENSPMGG00000004719	-	96	80.952	Periophthalmus_magnuspinnatus
ENSONIG00000004107	rbm5	99	44.784	ENSPMAG00000001998	rbm5	99	44.958	Petromyzon_marinus
ENSONIG00000004107	rbm5	100	60.870	ENSPCIG00000021531	RBM5	100	61.460	Phascolarctos_cinereus
ENSONIG00000004107	rbm5	100	82.292	ENSPLAG00000006318	rbm5	100	84.259	Poecilia_latipinna
ENSONIG00000004107	rbm5	74	72.257	ENSPMEG00000008651	rbm5	99	72.414	Poecilia_mexicana
ENSONIG00000004107	rbm5	100	82.271	ENSPMEG00000004295	rbm5	100	84.009	Poecilia_mexicana
ENSONIG00000004107	rbm5	100	82.851	ENSPREG00000003795	rbm5	100	84.473	Poecilia_reticulata
ENSONIG00000004107	rbm5	55	62.882	ENSPCAG00000005459	RBM5	73	62.882	Procavia_capensis
ENSONIG00000004107	rbm5	100	61.663	ENSPCOG00000025840	RBM5	100	61.574	Propithecus_coquereli
ENSONIG00000004107	rbm5	100	59.007	ENSPVAG00000006812	RBM5	100	58.750	Pteropus_vampyrus
ENSONIG00000004107	rbm5	83	63.034	ENSPNYG00000006361	RBM5	99	63.586	Pundamilia_nyererei
ENSONIG00000004107	rbm5	100	98.716	ENSPNYG00000014787	rbm5	100	98.716	Pundamilia_nyererei
ENSONIG00000004107	rbm5	100	74.971	ENSPNAG00000012070	rbm5	100	75.057	Pygocentrus_nattereri
ENSONIG00000004107	rbm5	100	60.995	ENSRNOG00000018153	Rbm5	100	61.231	Rattus_norvegicus
ENSONIG00000004107	rbm5	100	61.778	ENSRBIG00000012679	RBM5	100	61.688	Rhinopithecus_bieti
ENSONIG00000004107	rbm5	100	61.993	ENSRROG00000041331	RBM5	100	61.688	Rhinopithecus_roxellana
ENSONIG00000004107	rbm5	100	61.503	ENSSBOG00000006324	RBM5	100	61.574	Saimiri_boliviensis_boliviensis
ENSONIG00000004107	rbm5	100	61.432	ENSSHAG00000018260	RBM5	100	61.345	Sarcophilus_harrisii
ENSONIG00000004107	rbm5	100	73.465	ENSSFOG00015019052	rbm5	94	75.000	Scleropages_formosus
ENSONIG00000004107	rbm5	99	75.472	ENSSFOG00015019645	-	99	76.550	Scleropages_formosus
ENSONIG00000004107	rbm5	100	87.340	ENSSMAG00000017106	rbm5	100	86.643	Scophthalmus_maximus
ENSONIG00000004107	rbm5	100	89.315	ENSSDUG00000019775	rbm5	100	89.082	Seriola_dumerili
ENSONIG00000004107	rbm5	100	89.431	ENSSLDG00000002329	rbm5	100	89.199	Seriola_lalandi_dorsalis
ENSONIG00000004107	rbm5	100	66.362	ENSSLDG00000015996	-	100	66.858	Seriola_lalandi_dorsalis
ENSONIG00000004107	rbm5	54	78.205	ENSSARG00000009724	-	63	75.641	Sorex_araneus
ENSONIG00000004107	rbm5	100	57.311	ENSSPUG00000001876	RBM5	88	60.118	Sphenodon_punctatus
ENSONIG00000004107	rbm5	100	90.782	ENSSPAG00000019638	rbm5	100	91.132	Stegastes_partitus
ENSONIG00000004107	rbm5	100	66.051	ENSSPAG00000020011	-	100	65.358	Stegastes_partitus
ENSONIG00000004107	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSONIG00000004107	rbm5	92	57.357	ENSTGUG00000006417	RBM5	98	57.901	Taeniopygia_guttata
ENSONIG00000004107	rbm5	100	82.114	ENSTRUG00000008292	rbm5	100	83.733	Takifugu_rubripes
ENSONIG00000004107	rbm5	79	80.899	ENSTNIG00000014742	rbm5	94	81.091	Tetraodon_nigroviridis
ENSONIG00000004107	rbm5	100	55.774	ENSTBEG00000005424	RBM5	92	62.356	Tupaia_belangeri
ENSONIG00000004107	rbm5	91	58.512	ENSTTRG00000007717	RBM5	100	57.110	Tursiops_truncatus
ENSONIG00000004107	rbm5	100	61.432	ENSUAMG00000028347	RBM5	100	61.460	Ursus_americanus
ENSONIG00000004107	rbm5	93	69.231	ENSUMAG00000022027	RBM5	100	67.949	Ursus_maritimus
ENSONIG00000004107	rbm5	90	59.184	ENSVPAG00000009388	RBM5	97	59.948	Vicugna_pacos
ENSONIG00000004107	rbm5	100	61.547	ENSVVUG00000028647	RBM5	100	61.574	Vulpes_vulpes
ENSONIG00000004107	rbm5	100	82.735	ENSXMAG00000016369	rbm5	100	84.357	Xiphophorus_maculatus