EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004152 (Gene tree)
Gene ID: 100704167
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5463 bases
Position: chrGL831197.1:1564267-1569729
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005230	dsrm	PF00035.26	1.3e-41	1	4
ENSONIP00000005230	dsrm	PF00035.26	1.3e-41	2	4
ENSONIP00000005230	dsrm	PF00035.26	1.3e-41	3	4
ENSONIP00000005230	dsrm	PF00035.26	1.3e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005234	-	2169	-	ENSONIP00000005230	722 (aa)	-	I3J8P0

Gene Model

Click here to download ENSONIG00000004152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004152	stau1	82	46.562	ENSONIG00000014300	stau2	87	47.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004152	stau1	95	73.592	ENSG00000124214	STAU1	99	74.251	Homo_sapiens
ENSONIG00000004152	stau1	99	90.629	ENSAPOG00000017260	stau1	100	90.629	Acanthochromis_polyacanthus
ENSONIG00000004152	stau1	98	67.039	ENSAMEG00000013681	STAU1	98	67.039	Ailuropoda_melanoleuca
ENSONIG00000004152	stau1	99	90.769	ENSACIG00000015918	stau1	100	91.748	Amphilophus_citrinellus
ENSONIG00000004152	stau1	99	90.909	ENSAOCG00000012224	stau1	100	90.909	Amphiprion_ocellaris
ENSONIG00000004152	stau1	99	90.909	ENSAPEG00000012308	stau1	100	90.909	Amphiprion_percula
ENSONIG00000004152	stau1	99	90.909	ENSATEG00000024600	stau1	100	90.909	Anabas_testudineus
ENSONIG00000004152	stau1	98	70.000	ENSAPLG00000010527	STAU1	100	69.906	Anas_platyrhynchos
ENSONIG00000004152	stau1	98	70.523	ENSACAG00000015909	STAU1	99	70.426	Anolis_carolinensis
ENSONIG00000004152	stau1	95	72.553	ENSANAG00000032714	STAU1	99	72.553	Aotus_nancymaae
ENSONIG00000004152	stau1	99	96.208	ENSACLG00000012270	stau1	100	96.208	Astatotilapia_calliptera
ENSONIG00000004152	stau1	95	80.309	ENSAMXG00000016812	stau1	98	80.309	Astyanax_mexicanus
ENSONIG00000004152	stau1	95	73.204	ENSBTAG00000000241	STAU1	99	73.204	Bos_taurus
ENSONIG00000004152	stau1	95	73.398	ENSCJAG00000016233	STAU1	99	73.398	Callithrix_jacchus
ENSONIG00000004152	stau1	95	70.795	ENSCAFG00000011347	STAU1	97	70.795	Canis_familiaris
ENSONIG00000004152	stau1	95	67.379	ENSCAFG00020017123	STAU1	99	70.616	Canis_lupus_dingo
ENSONIG00000004152	stau1	95	73.010	ENSCHIG00000001799	-	99	73.010	Capra_hircus
ENSONIG00000004152	stau1	95	72.621	ENSTSYG00000036179	-	99	72.621	Carlito_syrichta
ENSONIG00000004152	stau1	69	73.054	ENSCAPG00000017041	STAU1	99	72.854	Cavia_aperea
ENSONIG00000004152	stau1	68	71.600	ENSCPOG00000005566	STAU1	99	71.600	Cavia_porcellus
ENSONIG00000004152	stau1	95	72.553	ENSCCAG00000034339	STAU1	99	72.553	Cebus_capucinus
ENSONIG00000004152	stau1	95	75.966	ENSCATG00000028474	STAU1	99	75.966	Cercocebus_atys
ENSONIG00000004152	stau1	68	74.000	ENSCLAG00000006516	-	99	74.000	Chinchilla_lanigera
ENSONIG00000004152	stau1	68	60.040	ENSCLAG00000002784	-	99	60.040	Chinchilla_lanigera
ENSONIG00000004152	stau1	69	74.451	ENSCSAG00000014986	STAU1	99	74.451	Chlorocebus_sabaeus
ENSONIG00000004152	stau1	95	73.643	ENSCHOG00000001511	STAU1	99	73.643	Choloepus_hoffmanni
ENSONIG00000004152	stau1	99	70.685	ENSCPBG00000026741	STAU1	100	70.548	Chrysemys_picta_bellii
ENSONIG00000004152	stau1	95	73.786	ENSCANG00000039220	STAU1	99	73.786	Colobus_angolensis_palliatus
ENSONIG00000004152	stau1	68	70.000	ENSCGRG00001013453	Stau1	99	70.000	Cricetulus_griseus_chok1gshd
ENSONIG00000004152	stau1	68	70.000	ENSCGRG00000007216	Stau1	99	70.000	Cricetulus_griseus_crigri
ENSONIG00000004152	stau1	99	76.397	ENSCSEG00000000792	stau1	100	77.514	Cynoglossus_semilaevis
ENSONIG00000004152	stau1	95	82.840	ENSCVAG00000005906	stau1	100	84.221	Cyprinodon_variegatus
ENSONIG00000004152	stau1	99	77.545	ENSDARG00000044182	stau1	100	78.321	Danio_rerio
ENSONIG00000004152	stau1	95	73.643	ENSDNOG00000014933	STAU1	97	73.450	Dasypus_novemcinctus
ENSONIG00000004152	stau1	68	72.470	ENSDORG00000030220	Stau1	99	72.470	Dipodomys_ordii
ENSONIG00000004152	stau1	61	75.497	ENSETEG00000018235	STAU1	87	75.497	Echinops_telfairi
ENSONIG00000004152	stau1	95	72.553	ENSEASG00005023343	STAU1	99	72.553	Equus_asinus_asinus
ENSONIG00000004152	stau1	95	73.398	ENSECAG00000012894	STAU1	99	73.398	Equus_caballus
ENSONIG00000004152	stau1	62	77.157	ENSEEUG00000014344	STAU1	68	77.157	Erinaceus_europaeus
ENSONIG00000004152	stau1	98	80.716	ENSELUG00000002529	stau1	99	81.997	Esox_lucius
ENSONIG00000004152	stau1	95	71.481	ENSFCAG00000001447	STAU1	99	71.481	Felis_catus
ENSONIG00000004152	stau1	98	71.588	ENSFALG00000012940	STAU1	100	71.488	Ficedula_albicollis
ENSONIG00000004152	stau1	69	56.574	ENSFDAG00000020837	-	99	55.777	Fukomys_damarensis
ENSONIG00000004152	stau1	68	73.600	ENSFDAG00000014119	-	99	73.600	Fukomys_damarensis
ENSONIG00000004152	stau1	98	85.434	ENSFHEG00000013517	stau1	100	85.575	Fundulus_heteroclitus
ENSONIG00000004152	stau1	99	71.429	ENSGMOG00000016850	stau1	100	71.429	Gadus_morhua
ENSONIG00000004152	stau1	98	72.145	ENSGALG00000004736	STAU1	100	72.045	Gallus_gallus
ENSONIG00000004152	stau1	98	86.555	ENSGAFG00000010437	stau1	99	86.555	Gambusia_affinis
ENSONIG00000004152	stau1	99	88.359	ENSGACG00000001352	stau1	100	88.359	Gasterosteus_aculeatus
ENSONIG00000004152	stau1	99	71.271	ENSGAGG00000009825	STAU1	100	71.271	Gopherus_agassizii
ENSONIG00000004152	stau1	95	68.130	ENSGGOG00000025351	STAU1	99	76.923	Gorilla_gorilla
ENSONIG00000004152	stau1	99	96.348	ENSHBUG00000023668	stau1	100	96.348	Haplochromis_burtoni
ENSONIG00000004152	stau1	68	74.899	ENSHGLG00000008730	STAU1	99	74.899	Heterocephalus_glaber_female
ENSONIG00000004152	stau1	68	74.899	ENSHGLG00100000098	STAU1	99	74.899	Heterocephalus_glaber_male
ENSONIG00000004152	stau1	99	81.869	ENSHCOG00000018461	stau1	100	81.869	Hippocampus_comes
ENSONIG00000004152	stau1	99	73.427	ENSIPUG00000023725	stau1	100	73.427	Ictalurus_punctatus
ENSONIG00000004152	stau1	68	73.482	ENSSTOG00000003634	STAU1	99	73.482	Ictidomys_tridecemlineatus
ENSONIG00000004152	stau1	68	72.672	ENSJJAG00000020032	Stau1	99	72.672	Jaculus_jaculus
ENSONIG00000004152	stau1	98	83.826	ENSKMAG00000007135	stau1	99	84.151	Kryptolebias_marmoratus
ENSONIG00000004152	stau1	99	88.671	ENSLBEG00000020172	stau1	100	88.671	Labrus_bergylta
ENSONIG00000004152	stau1	99	70.897	ENSLACG00000016157	STAU1	99	70.897	Latimeria_chalumnae
ENSONIG00000004152	stau1	98	75.385	ENSLOCG00000003134	stau1	100	75.978	Lepisosteus_oculatus
ENSONIG00000004152	stau1	71	73.735	ENSLAFG00000003238	STAU1	99	73.735	Loxodonta_africana
ENSONIG00000004152	stau1	95	75.966	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSONIG00000004152	stau1	95	68.130	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSONIG00000004152	stau1	95	73.592	ENSMNEG00000033821	STAU1	99	73.592	Macaca_nemestrina
ENSONIG00000004152	stau1	95	73.592	ENSMLEG00000031383	STAU1	99	73.592	Mandrillus_leucophaeus
ENSONIG00000004152	stau1	99	90.909	ENSMAMG00000017586	stau1	100	90.975	Mastacembelus_armatus
ENSONIG00000004152	stau1	99	96.067	ENSMZEG00005015605	stau1	100	96.067	Maylandia_zebra
ENSONIG00000004152	stau1	98	70.000	ENSMGAG00000004719	STAU1	100	69.906	Meleagris_gallopavo
ENSONIG00000004152	stau1	68	70.000	ENSMAUG00000013846	Stau1	99	70.000	Mesocricetus_auratus
ENSONIG00000004152	stau1	95	71.785	ENSMICG00000001995	STAU1	99	71.785	Microcebus_murinus
ENSONIG00000004152	stau1	68	70.600	ENSMOCG00000018743	Stau1	99	70.600	Microtus_ochrogaster
ENSONIG00000004152	stau1	99	85.874	ENSMMOG00000015455	stau1	99	88.176	Mola_mola
ENSONIG00000004152	stau1	95	70.791	ENSMODG00000016276	STAU1	99	70.791	Monodelphis_domestica
ENSONIG00000004152	stau1	99	89.650	ENSMALG00000000045	stau1	100	89.650	Monopterus_albus
ENSONIG00000004152	stau1	68	71.224	MGP_CAROLIEiJ_G0024699	Stau1	100	71.079	Mus_caroli
ENSONIG00000004152	stau1	68	71.224	ENSMUSG00000039536	Stau1	100	71.079	Mus_musculus
ENSONIG00000004152	stau1	68	70.648	MGP_PahariEiJ_G0026141	Stau1	99	70.648	Mus_pahari
ENSONIG00000004152	stau1	68	71.690	MGP_SPRETEiJ_G0025619	Stau1	100	71.545	Mus_spretus
ENSONIG00000004152	stau1	94	68.650	ENSMPUG00000017581	STAU1	99	68.650	Mustela_putorius_furo
ENSONIG00000004152	stau1	95	72.233	ENSMLUG00000008407	STAU1	97	72.233	Myotis_lucifugus
ENSONIG00000004152	stau1	68	71.800	ENSNGAG00000007108	Stau1	99	71.800	Nannospalax_galili
ENSONIG00000004152	stau1	99	96.208	ENSNBRG00000017596	stau1	100	96.208	Neolamprologus_brichardi
ENSONIG00000004152	stau1	95	73.398	ENSNLEG00000006955	STAU1	99	73.398	Nomascus_leucogenys
ENSONIG00000004152	stau1	64	79.266	ENSMEUG00000003263	STAU1	80	79.266	Notamacropus_eugenii
ENSONIG00000004152	stau1	92	69.188	ENSOPRG00000014569	STAU1	93	69.188	Ochotona_princeps
ENSONIG00000004152	stau1	69	73.852	ENSODEG00000006523	STAU1	99	73.852	Octodon_degus
ENSONIG00000004152	stau1	95	70.630	ENSOANG00000006394	STAU1	96	70.529	Ornithorhynchus_anatinus
ENSONIG00000004152	stau1	95	70.425	ENSOCUG00000006214	STAU1	99	70.425	Oryctolagus_cuniculus
ENSONIG00000004152	stau1	98	84.034	ENSOMEG00000002388	stau1	99	84.034	Oryzias_melastigma
ENSONIG00000004152	stau1	69	51.297	ENSOGAG00000028222	-	99	50.800	Otolemur_garnettii
ENSONIG00000004152	stau1	95	73.592	ENSOGAG00000002127	STAU1	97	73.592	Otolemur_garnettii
ENSONIG00000004152	stau1	95	73.010	ENSOARG00000012204	STAU1	97	73.010	Ovis_aries
ENSONIG00000004152	stau1	95	68.130	ENSPPAG00000032023	STAU1	99	76.923	Pan_paniscus
ENSONIG00000004152	stau1	95	71.667	ENSPPRG00000003436	STAU1	99	74.451	Panthera_pardus
ENSONIG00000004152	stau1	95	71.667	ENSPTIG00000011768	STAU1	99	74.016	Panthera_tigris_altaica
ENSONIG00000004152	stau1	95	68.130	ENSPTRG00000023130	STAU1	99	76.923	Pan_troglodytes
ENSONIG00000004152	stau1	95	75.966	ENSPANG00000020560	STAU1	99	75.966	Papio_anubis
ENSONIG00000004152	stau1	99	77.191	ENSPKIG00000024588	stau1	100	77.917	Paramormyrops_kingsleyae
ENSONIG00000004152	stau1	98	71.646	ENSPSIG00000010731	STAU1	99	71.685	Pelodiscus_sinensis
ENSONIG00000004152	stau1	98	82.706	ENSPMGG00000018553	stau1	100	82.451	Periophthalmus_magnuspinnatus
ENSONIG00000004152	stau1	68	70.600	ENSPEMG00000022045	Stau1	99	70.600	Peromyscus_maniculatus_bairdii
ENSONIG00000004152	stau1	92	75.096	ENSPCIG00000023269	STAU1	97	75.340	Phascolarctos_cinereus
ENSONIG00000004152	stau1	99	85.335	ENSPFOG00000017253	stau1	100	85.335	Poecilia_formosa
ENSONIG00000004152	stau1	58	80.952	ENSPLAG00000014829	stau1	96	81.491	Poecilia_latipinna
ENSONIG00000004152	stau1	99	81.844	ENSPMEG00000007495	stau1	99	81.958	Poecilia_mexicana
ENSONIG00000004152	stau1	99	85.475	ENSPREG00000003477	stau1	100	85.475	Poecilia_reticulata
ENSONIG00000004152	stau1	95	73.450	ENSPPYG00000011111	STAU1	99	73.450	Pongo_abelii
ENSONIG00000004152	stau1	67	66.460	ENSPCAG00000002459	STAU1	99	66.460	Procavia_capensis
ENSONIG00000004152	stau1	95	73.010	ENSPCOG00000027746	STAU1	99	73.010	Propithecus_coquereli
ENSONIG00000004152	stau1	60	77.483	ENSPVAG00000015019	STAU1	86	77.483	Pteropus_vampyrus
ENSONIG00000004152	stau1	99	96.348	ENSPNYG00000014436	stau1	100	96.348	Pundamilia_nyererei
ENSONIG00000004152	stau1	99	77.855	ENSPNAG00000011323	stau1	100	78.720	Pygocentrus_nattereri
ENSONIG00000004152	stau1	68	70.200	ENSRNOG00000007781	Stau1	99	70.200	Rattus_norvegicus
ENSONIG00000004152	stau1	69	73.705	ENSRBIG00000037345	STAU1	100	73.506	Rhinopithecus_bieti
ENSONIG00000004152	stau1	95	73.592	ENSRROG00000039008	STAU1	99	73.592	Rhinopithecus_roxellana
ENSONIG00000004152	stau1	95	72.553	ENSSBOG00000034448	STAU1	99	72.553	Saimiri_boliviensis_boliviensis
ENSONIG00000004152	stau1	95	75.969	ENSSHAG00000009492	STAU1	97	75.969	Sarcophilus_harrisii
ENSONIG00000004152	stau1	99	78.212	ENSSFOG00015021497	stau1	100	78.212	Scleropages_formosus
ENSONIG00000004152	stau1	99	89.231	ENSSMAG00000017410	stau1	100	89.231	Scophthalmus_maximus
ENSONIG00000004152	stau1	99	91.469	ENSSDUG00000019439	stau1	100	91.469	Seriola_dumerili
ENSONIG00000004152	stau1	99	91.748	ENSSLDG00000025040	stau1	100	91.748	Seriola_lalandi_dorsalis
ENSONIG00000004152	stau1	98	70.782	ENSSPUG00000017983	STAU1	99	71.327	Sphenodon_punctatus
ENSONIG00000004152	stau1	99	91.469	ENSSPAG00000019275	stau1	100	91.469	Stegastes_partitus
ENSONIG00000004152	stau1	95	73.398	ENSSSCG00000027444	STAU1	99	74.052	Sus_scrofa
ENSONIG00000004152	stau1	99	69.179	ENSTGUG00000008784	STAU1	100	69.179	Taeniopygia_guttata
ENSONIG00000004152	stau1	99	84.895	ENSTRUG00000005837	stau1	100	85.455	Takifugu_rubripes
ENSONIG00000004152	stau1	96	83.960	ENSTNIG00000014732	stau1	99	83.960	Tetraodon_nigroviridis
ENSONIG00000004152	stau1	95	62.209	ENSTBEG00000009404	STAU1	99	62.209	Tupaia_belangeri
ENSONIG00000004152	stau1	64	73.810	ENSTTRG00000004285	STAU1	80	73.810	Tursiops_truncatus
ENSONIG00000004152	stau1	78	73.031	ENSUAMG00000025449	STAU1	99	73.031	Ursus_americanus
ENSONIG00000004152	stau1	52	69.792	ENSUMAG00000024475	STAU1	89	69.792	Ursus_maritimus
ENSONIG00000004152	stau1	95	73.398	ENSVPAG00000001313	STAU1	99	73.398	Vicugna_pacos
ENSONIG00000004152	stau1	95	67.521	ENSVVUG00000022325	STAU1	99	67.521	Vulpes_vulpes
ENSONIG00000004152	stau1	96	69.528	ENSXETG00000001783	stau1	96	69.385	Xenopus_tropicalis
ENSONIG00000004152	stau1	54	80.612	ENSXCOG00000008804	stau1	94	79.337	Xiphophorus_couchianus
ENSONIG00000004152	stau1	98	85.994	ENSXMAG00000016175	stau1	99	85.994	Xiphophorus_maculatus