EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004230 (Gene tree)
Gene ID: 100706557
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3497 bases
Position: chrGL831197.1:2075040-2078536
Accession: 100706557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005324	TruB_N	PF01509.18	4.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005328	-	1449	XM_003448413	ENSONIP00000005324	330 (aa)	XP_003448461	I3J8Y4

Gene Model

Click here to download ENSONIG00000004230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004230	trub2	60	30.500	ENSONIG00000007249	trub1	71	30.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004230	trub2	84	54.317	ENSG00000167112	TRUB2	84	54.317	Homo_sapiens
ENSONIG00000004230	trub2	99	62.270	ENSAPOG00000018284	-	94	79.290	Acanthochromis_polyacanthus
ENSONIG00000004230	trub2	74	80.658	ENSAPOG00000015733	trub2	88	80.658	Acanthochromis_polyacanthus
ENSONIG00000004230	trub2	52	74.576	ENSAPOG00000018216	-	85	74.576	Acanthochromis_polyacanthus
ENSONIG00000004230	trub2	85	53.191	ENSAMEG00000015395	TRUB2	85	53.191	Ailuropoda_melanoleuca
ENSONIG00000004230	trub2	100	86.061	ENSACIG00000016500	trub2	100	86.061	Amphilophus_citrinellus
ENSONIG00000004230	trub2	99	80.982	ENSAOCG00000002330	trub2	95	80.982	Amphiprion_ocellaris
ENSONIG00000004230	trub2	99	80.675	ENSAPEG00000013177	trub2	95	80.675	Amphiprion_percula
ENSONIG00000004230	trub2	87	79.514	ENSATEG00000011371	trub2	91	79.514	Anabas_testudineus
ENSONIG00000004230	trub2	83	50.730	ENSAPLG00000009254	TRUB2	89	50.730	Anas_platyrhynchos
ENSONIG00000004230	trub2	85	53.025	ENSACAG00000007331	TRUB2	85	53.025	Anolis_carolinensis
ENSONIG00000004230	trub2	84	55.396	ENSANAG00000036234	TRUB2	89	55.396	Aotus_nancymaae
ENSONIG00000004230	trub2	100	93.939	ENSACLG00000010793	trub2	100	93.939	Astatotilapia_calliptera
ENSONIG00000004230	trub2	98	57.669	ENSAMXG00000031679	trub2	92	57.669	Astyanax_mexicanus
ENSONIG00000004230	trub2	84	54.676	ENSCJAG00000020009	TRUB2	84	54.676	Callithrix_jacchus
ENSONIG00000004230	trub2	84	52.878	ENSCAFG00000020068	TRUB2	84	52.878	Canis_familiaris
ENSONIG00000004230	trub2	52	50.292	ENSCAFG00020017325	-	96	50.292	Canis_lupus_dingo
ENSONIG00000004230	trub2	84	54.122	ENSCHIG00000021160	TRUB2	84	54.122	Capra_hircus
ENSONIG00000004230	trub2	84	54.317	ENSTSYG00000034163	TRUB2	84	54.317	Carlito_syrichta
ENSONIG00000004230	trub2	75	55.645	ENSCAPG00000000223	TRUB2	89	51.773	Cavia_aperea
ENSONIG00000004230	trub2	87	54.861	ENSCPOG00000013535	TRUB2	91	51.381	Cavia_porcellus
ENSONIG00000004230	trub2	85	51.246	ENSCCAG00000028463	-	85	51.246	Cebus_capucinus
ENSONIG00000004230	trub2	84	54.676	ENSCCAG00000026531	-	85	54.676	Cebus_capucinus
ENSONIG00000004230	trub2	84	54.676	ENSCATG00000038234	TRUB2	84	54.676	Cercocebus_atys
ENSONIG00000004230	trub2	84	54.317	ENSCLAG00000001702	TRUB2	87	52.632	Chinchilla_lanigera
ENSONIG00000004230	trub2	84	51.773	ENSCSAG00000014117	TRUB2	84	51.773	Chlorocebus_sabaeus
ENSONIG00000004230	trub2	84	52.158	ENSCHOG00000001555	TRUB2	84	52.158	Choloepus_hoffmanni
ENSONIG00000004230	trub2	84	55.556	ENSCPBG00000025186	TRUB2	81	55.556	Chrysemys_picta_bellii
ENSONIG00000004230	trub2	87	33.677	ENSCSAVG00000003930	-	89	33.677	Ciona_savignyi
ENSONIG00000004230	trub2	84	48.201	ENSCANG00000016135	TRUB2	82	48.201	Colobus_angolensis_palliatus
ENSONIG00000004230	trub2	84	52.518	ENSCGRG00001024441	Trub2	91	49.123	Cricetulus_griseus_chok1gshd
ENSONIG00000004230	trub2	84	52.518	ENSCGRG00000005633	Trub2	84	52.518	Cricetulus_griseus_crigri
ENSONIG00000004230	trub2	95	66.349	ENSCSEG00000001331	trub2	94	66.349	Cynoglossus_semilaevis
ENSONIG00000004230	trub2	99	72.086	ENSCVAG00000009901	trub2	98	72.086	Cyprinodon_variegatus
ENSONIG00000004230	trub2	99	58.232	ENSDARG00000028379	trub2	93	58.232	Danio_rerio
ENSONIG00000004230	trub2	83	36.426	ENSDNOG00000043967	-	88	36.426	Dasypus_novemcinctus
ENSONIG00000004230	trub2	84	52.878	ENSDNOG00000045679	-	83	52.878	Dasypus_novemcinctus
ENSONIG00000004230	trub2	84	53.237	ENSDORG00000016222	Trub2	87	53.237	Dipodomys_ordii
ENSONIG00000004230	trub2	86	31.186	FBgn0033060	CG7849	90	31.186	Drosophila_melanogaster
ENSONIG00000004230	trub2	84	52.878	ENSETEG00000009114	TRUB2	86	52.878	Echinops_telfairi
ENSONIG00000004230	trub2	86	45.161	ENSEBUG00000015723	trub2	82	45.161	Eptatretus_burgeri
ENSONIG00000004230	trub2	84	53.237	ENSEASG00005016819	TRUB2	84	53.237	Equus_asinus_asinus
ENSONIG00000004230	trub2	84	53.597	ENSECAG00000023520	TRUB2	84	53.597	Equus_caballus
ENSONIG00000004230	trub2	84	52.878	ENSEEUG00000008908	TRUB2	84	52.878	Erinaceus_europaeus
ENSONIG00000004230	trub2	90	64.952	ENSELUG00000002376	trub2	97	64.952	Esox_lucius
ENSONIG00000004230	trub2	84	54.676	ENSFCAG00000005839	TRUB2	86	54.676	Felis_catus
ENSONIG00000004230	trub2	76	52.000	ENSFALG00000001364	TRUB2	80	52.000	Ficedula_albicollis
ENSONIG00000004230	trub2	84	54.480	ENSFDAG00000021374	TRUB2	88	52.326	Fukomys_damarensis
ENSONIG00000004230	trub2	98	64.615	ENSFHEG00000014655	trub2	97	64.615	Fundulus_heteroclitus
ENSONIG00000004230	trub2	90	60.403	ENSGMOG00000000981	trub2	100	60.403	Gadus_morhua
ENSONIG00000004230	trub2	83	52.555	ENSGALG00000004920	TRUB2	67	52.555	Gallus_gallus
ENSONIG00000004230	trub2	99	72.086	ENSGAFG00000010107	trub2	97	72.086	Gambusia_affinis
ENSONIG00000004230	trub2	98	75.617	ENSGACG00000001476	trub2	98	75.617	Gasterosteus_aculeatus
ENSONIG00000004230	trub2	94	51.603	ENSGAGG00000022872	TRUB2	92	51.603	Gopherus_agassizii
ENSONIG00000004230	trub2	84	54.317	ENSGGOG00000014780	TRUB2	84	54.317	Gorilla_gorilla
ENSONIG00000004230	trub2	100	94.242	ENSHBUG00000022384	trub2	100	94.242	Haplochromis_burtoni
ENSONIG00000004230	trub2	84	53.597	ENSHGLG00000016715	TRUB2	84	53.597	Heterocephalus_glaber_female
ENSONIG00000004230	trub2	84	53.597	ENSHGLG00100016548	TRUB2	84	53.597	Heterocephalus_glaber_male
ENSONIG00000004230	trub2	98	74.462	ENSHCOG00000017748	trub2	99	74.462	Hippocampus_comes
ENSONIG00000004230	trub2	99	56.839	ENSIPUG00000017725	hdhd3	57	56.839	Ictalurus_punctatus
ENSONIG00000004230	trub2	84	53.763	ENSSTOG00000008024	-	88	50.575	Ictidomys_tridecemlineatus
ENSONIG00000004230	trub2	84	53.763	ENSSTOG00000022617	-	84	53.763	Ictidomys_tridecemlineatus
ENSONIG00000004230	trub2	84	46.763	ENSJJAG00000019181	Trub2	82	46.763	Jaculus_jaculus
ENSONIG00000004230	trub2	99	73.476	ENSKMAG00000007861	trub2	98	73.476	Kryptolebias_marmoratus
ENSONIG00000004230	trub2	96	75.079	ENSLBEG00000000907	trub2	94	75.079	Labrus_bergylta
ENSONIG00000004230	trub2	87	51.389	ENSLACG00000001515	TRUB2	85	51.389	Latimeria_chalumnae
ENSONIG00000004230	trub2	87	59.375	ENSLOCG00000000885	trub2	95	59.375	Lepisosteus_oculatus
ENSONIG00000004230	trub2	84	52.878	ENSLAFG00000002174	TRUB2	91	52.878	Loxodonta_africana
ENSONIG00000004230	trub2	84	54.317	ENSMFAG00000000881	TRUB2	84	54.317	Macaca_fascicularis
ENSONIG00000004230	trub2	84	54.317	ENSMMUG00000014146	TRUB2	84	54.317	Macaca_mulatta
ENSONIG00000004230	trub2	84	54.317	ENSMNEG00000011189	TRUB2	84	54.317	Macaca_nemestrina
ENSONIG00000004230	trub2	84	54.317	ENSMLEG00000037270	TRUB2	84	54.317	Mandrillus_leucophaeus
ENSONIG00000004230	trub2	89	80.000	ENSMAMG00000023643	trub2	98	80.000	Mastacembelus_armatus
ENSONIG00000004230	trub2	100	94.242	ENSMZEG00005016018	trub2	100	94.242	Maylandia_zebra
ENSONIG00000004230	trub2	55	54.645	ENSMGAG00000003894	TRUB2	92	54.645	Meleagris_gallopavo
ENSONIG00000004230	trub2	84	53.597	ENSMAUG00000010403	Trub2	95	48.387	Mesocricetus_auratus
ENSONIG00000004230	trub2	84	54.676	ENSMICG00000047032	TRUB2	84	54.676	Microcebus_murinus
ENSONIG00000004230	trub2	84	53.597	ENSMOCG00000014291	Trub2	91	53.597	Microtus_ochrogaster
ENSONIG00000004230	trub2	97	73.209	ENSMMOG00000021674	trub2	99	73.209	Mola_mola
ENSONIG00000004230	trub2	85	52.857	ENSMODG00000005940	TRUB2	94	52.857	Monodelphis_domestica
ENSONIG00000004230	trub2	99	76.596	ENSMALG00000021231	trub2	98	76.596	Monopterus_albus
ENSONIG00000004230	trub2	84	52.158	MGP_CAROLIEiJ_G0023368	Trub2	95	46.774	Mus_caroli
ENSONIG00000004230	trub2	84	51.799	ENSMUSG00000039826	Trub2	95	46.237	Mus_musculus
ENSONIG00000004230	trub2	85	52.330	MGP_PahariEiJ_G0024826	Trub2	88	49.708	Mus_pahari
ENSONIG00000004230	trub2	84	52.158	MGP_SPRETEiJ_G0024286	Trub2	95	46.774	Mus_spretus
ENSONIG00000004230	trub2	85	52.128	ENSMPUG00000013206	TRUB2	77	52.128	Mustela_putorius_furo
ENSONIG00000004230	trub2	85	54.122	ENSMLUG00000005256	TRUB2	84	54.122	Myotis_lucifugus
ENSONIG00000004230	trub2	84	51.799	ENSNGAG00000018679	Trub2	84	51.799	Nannospalax_galili
ENSONIG00000004230	trub2	100	93.939	ENSNBRG00000016294	trub2	100	93.939	Neolamprologus_brichardi
ENSONIG00000004230	trub2	84	54.317	ENSNLEG00000017556	TRUB2	84	54.317	Nomascus_leucogenys
ENSONIG00000004230	trub2	84	53.791	ENSMEUG00000000484	TRUB2	89	53.791	Notamacropus_eugenii
ENSONIG00000004230	trub2	95	45.597	ENSOPRG00000001981	TRUB2	96	45.597	Ochotona_princeps
ENSONIG00000004230	trub2	84	54.317	ENSODEG00000017292	TRUB2	85	54.317	Octodon_degus
ENSONIG00000004230	trub2	57	48.404	ENSOANG00000029023	-	83	48.404	Ornithorhynchus_anatinus
ENSONIG00000004230	trub2	84	52.518	ENSOCUG00000026296	TRUB2	76	52.518	Oryctolagus_cuniculus
ENSONIG00000004230	trub2	98	67.073	ENSORLG00000020011	trub2	99	67.073	Oryzias_latipes
ENSONIG00000004230	trub2	98	67.584	ENSORLG00020011028	trub2	95	67.890	Oryzias_latipes_hni
ENSONIG00000004230	trub2	98	68.308	ENSORLG00015007494	trub2	96	68.615	Oryzias_latipes_hsok
ENSONIG00000004230	trub2	99	72.086	ENSOMEG00000006702	trub2	99	72.086	Oryzias_melastigma
ENSONIG00000004230	trub2	59	54.872	ENSOARG00000003785	-	81	53.659	Ovis_aries
ENSONIG00000004230	trub2	84	53.957	ENSOARG00000010579	-	84	53.957	Ovis_aries
ENSONIG00000004230	trub2	84	54.676	ENSPPAG00000043146	TRUB2	84	54.676	Pan_paniscus
ENSONIG00000004230	trub2	84	54.676	ENSPPRG00000006307	TRUB2	86	54.676	Panthera_pardus
ENSONIG00000004230	trub2	84	55.036	ENSPTIG00000012366	TRUB2	86	55.036	Panthera_tigris_altaica
ENSONIG00000004230	trub2	84	54.317	ENSPTRG00000052151	-	84	54.317	Pan_troglodytes
ENSONIG00000004230	trub2	84	54.317	ENSPTRG00000021423	TRUB2	84	54.317	Pan_troglodytes
ENSONIG00000004230	trub2	84	54.317	ENSPANG00000025856	TRUB2	84	54.317	Papio_anubis
ENSONIG00000004230	trub2	91	64.667	ENSPKIG00000019769	trub2	98	64.667	Paramormyrops_kingsleyae
ENSONIG00000004230	trub2	84	51.439	ENSPSIG00000015701	TRUB2	92	51.439	Pelodiscus_sinensis
ENSONIG00000004230	trub2	93	70.968	ENSPMGG00000010206	trub2	97	70.968	Periophthalmus_magnuspinnatus
ENSONIG00000004230	trub2	84	53.047	ENSPEMG00000017893	Trub2	91	49.419	Peromyscus_maniculatus_bairdii
ENSONIG00000004230	trub2	84	54.152	ENSPCIG00000026731	TRUB2	89	54.152	Phascolarctos_cinereus
ENSONIG00000004230	trub2	96	73.668	ENSPFOG00000018018	trub2	84	73.668	Poecilia_formosa
ENSONIG00000004230	trub2	96	73.354	ENSPLAG00000010484	trub2	91	73.354	Poecilia_latipinna
ENSONIG00000004230	trub2	99	72.561	ENSPMEG00000012913	trub2	97	72.561	Poecilia_mexicana
ENSONIG00000004230	trub2	98	72.783	ENSPREG00000002549	trub2	97	72.783	Poecilia_reticulata
ENSONIG00000004230	trub2	84	53.957	ENSPPYG00000019650	TRUB2	85	53.957	Pongo_abelii
ENSONIG00000004230	trub2	84	53.597	ENSPCAG00000015068	TRUB2	85	53.597	Procavia_capensis
ENSONIG00000004230	trub2	84	55.036	ENSPCOG00000017100	TRUB2	84	55.036	Propithecus_coquereli
ENSONIG00000004230	trub2	79	53.462	ENSPVAG00000001224	TRUB2	87	53.462	Pteropus_vampyrus
ENSONIG00000004230	trub2	100	94.545	ENSPNYG00000013666	trub2	100	94.545	Pundamilia_nyererei
ENSONIG00000004230	trub2	95	60.635	ENSPNAG00000017292	trub2	89	60.635	Pygocentrus_nattereri
ENSONIG00000004230	trub2	84	53.047	ENSRNOG00000043189	Trub2	86	53.047	Rattus_norvegicus
ENSONIG00000004230	trub2	85	48.929	ENSRBIG00000006965	TRUB2	83	48.929	Rhinopithecus_bieti
ENSONIG00000004230	trub2	84	54.676	ENSRROG00000042928	TRUB2	84	54.676	Rhinopithecus_roxellana
ENSONIG00000004230	trub2	84	54.317	ENSSBOG00000022439	TRUB2	84	54.317	Saimiri_boliviensis_boliviensis
ENSONIG00000004230	trub2	89	61.775	ENSSFOG00015013391	trub2	94	61.775	Scleropages_formosus
ENSONIG00000004230	trub2	98	72.308	ENSSMAG00000020820	trub2	99	72.308	Scophthalmus_maximus
ENSONIG00000004230	trub2	99	76.900	ENSSDUG00000016928	trub2	98	76.900	Seriola_dumerili
ENSONIG00000004230	trub2	99	76.596	ENSSLDG00000024701	trub2	98	76.596	Seriola_lalandi_dorsalis
ENSONIG00000004230	trub2	85	51.254	ENSSPUG00000015515	TRUB2	83	51.254	Sphenodon_punctatus
ENSONIG00000004230	trub2	99	77.301	ENSSPAG00000017865	trub2	98	77.301	Stegastes_partitus
ENSONIG00000004230	trub2	84	53.237	ENSSSCG00000005645	TRUB2	84	53.012	Sus_scrofa
ENSONIG00000004230	trub2	75	52.419	ENSTGUG00000003704	TRUB2	94	52.419	Taeniopygia_guttata
ENSONIG00000004230	trub2	95	71.293	ENSTRUG00000015499	trub2	97	71.293	Takifugu_rubripes
ENSONIG00000004230	trub2	88	73.973	ENSTNIG00000014721	trub2	100	73.973	Tetraodon_nigroviridis
ENSONIG00000004230	trub2	54	52.247	ENSTBEG00000000586	TRUB2	79	52.247	Tupaia_belangeri
ENSONIG00000004230	trub2	84	53.237	ENSTTRG00000016486	TRUB2	84	53.237	Tursiops_truncatus
ENSONIG00000004230	trub2	85	52.837	ENSUAMG00000020276	TRUB2	83	52.837	Ursus_americanus
ENSONIG00000004230	trub2	85	52.837	ENSUMAG00000022051	TRUB2	83	52.837	Ursus_maritimus
ENSONIG00000004230	trub2	84	41.367	ENSVPAG00000005793	TRUB2	87	41.367	Vicugna_pacos
ENSONIG00000004230	trub2	84	52.878	ENSVVUG00000013451	TRUB2	79	52.878	Vulpes_vulpes
ENSONIG00000004230	trub2	87	54.483	ENSXETG00000003973	trub2	88	54.483	Xenopus_tropicalis
ENSONIG00000004230	trub2	99	72.086	ENSXCOG00000008759	trub2	97	72.086	Xiphophorus_couchianus
ENSONIG00000004230	trub2	99	71.779	ENSXMAG00000015478	trub2	97	71.779	Xiphophorus_maculatus