EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004248 (Gene tree)
Gene ID: 100707364
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 9487 bases
Position: chrGL831197.1:2121359-2130845
Accession: 100707364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005349	zf-C2H2	PF00096.26	2.2e-25	1	4
ENSONIP00000005349	zf-C2H2	PF00096.26	2.2e-25	2	4
ENSONIP00000005349	zf-C2H2	PF00096.26	2.2e-25	3	4
ENSONIP00000005349	zf-C2H2	PF00096.26	2.2e-25	4	4
ENSONIP00000005348	zf-C2H2	PF00096.26	7.2e-23	1	4
ENSONIP00000005348	zf-C2H2	PF00096.26	7.2e-23	2	4
ENSONIP00000005348	zf-C2H2	PF00096.26	7.2e-23	3	4
ENSONIP00000005348	zf-C2H2	PF00096.26	7.2e-23	4	4
ENSONIP00000005349	zf-met	PF12874.7	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005353	-	2324	-	ENSONIP00000005349	643 (aa)	-	I3J909
ENSONIT00000005352	-	1965	-	ENSONIP00000005348	654 (aa)	XP_003448462	I3J908

Gene Model

Click here to download ENSONIG00000004248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004248	patz1	56	33.333	ENSONIG00000006906	-	98	37.209
ENSONIG00000004248	patz1	52	35.354	ENSONIG00000015555	-	99	35.542
ENSONIG00000004248	patz1	53	36.154	ENSONIG00000015551	-	93	36.154
ENSONIG00000004248	patz1	62	31.073	ENSONIG00000015553	-	100	37.349
ENSONIG00000004248	patz1	51	30.802	ENSONIG00000001498	-	99	35.227
ENSONIG00000004248	patz1	52	32.161	ENSONIG00000015557	-	98	32.161
ENSONIG00000004248	patz1	50	30.116	ENSONIG00000000211	-	81	31.984
ENSONIG00000004248	patz1	56	32.283	ENSONIG00000000218	-	98	36.145
ENSONIG00000004248	patz1	52	32.889	ENSONIG00000007397	-	99	38.667
ENSONIG00000004248	patz1	51	31.163	ENSONIG00000007396	-	99	37.419
ENSONIG00000004248	patz1	52	33.898	ENSONIG00000015156	-	99	32.927
ENSONIG00000004248	patz1	52	31.858	ENSONIG00000005395	-	99	32.787
ENSONIG00000004248	patz1	51	31.500	ENSONIG00000009378	-	98	31.500
ENSONIG00000004248	patz1	63	30.942	ENSONIG00000007967	-	66	30.942
ENSONIG00000004248	patz1	50	32.576	ENSONIG00000003152	-	70	31.159
ENSONIG00000004248	patz1	50	39.583	ENSONIG00000001834	-	99	39.583
ENSONIG00000004248	patz1	50	32.317	ENSONIG00000014068	-	99	38.554
ENSONIG00000004248	patz1	54	37.500	ENSONIG00000020657	si:ch211-236k19.4	64	37.500
ENSONIG00000004248	patz1	51	31.579	ENSONIG00000018036	-	99	35.714
ENSONIG00000004248	patz1	51	33.690	ENSONIG00000018058	-	100	36.735
ENSONIG00000004248	patz1	88	36.810	ENSONIG00000000646	zbtb24	66	36.810
ENSONIG00000004248	patz1	50	31.973	ENSONIG00000000215	-	99	35.542
ENSONIG00000004248	patz1	50	32.381	ENSONIG00000017889	-	100	35.664
ENSONIG00000004248	patz1	53	39.597	ENSONIG00000001458	-	96	39.759
ENSONIG00000004248	patz1	84	35.417	ENSONIG00000009875	ZBTB14	92	35.417
ENSONIG00000004248	patz1	51	30.151	ENSONIG00000015513	-	98	31.579
ENSONIG00000004248	patz1	57	31.757	ENSONIG00000015514	-	89	32.780
ENSONIG00000004248	patz1	50	30.108	ENSONIG00000012374	-	99	34.911
ENSONIG00000004248	patz1	62	32.308	ENSONIG00000010655	bcl6ab	50	33.065
ENSONIG00000004248	patz1	52	30.000	ENSONIG00000008280	-	99	30.732
ENSONIG00000004248	patz1	50	32.500	ENSONIG00000000093	-	99	32.500
ENSONIG00000004248	patz1	50	31.336	ENSONIG00000006274	-	98	31.963
ENSONIG00000004248	patz1	51	32.889	ENSONIG00000019104	-	95	34.715
ENSONIG00000004248	patz1	50	31.977	ENSONIG00000009383	-	99	35.632
ENSONIG00000004248	patz1	50	31.390	ENSONIG00000007352	-	97	36.316
ENSONIG00000004248	patz1	50	32.601	ENSONIG00000007886	-	99	34.711
ENSONIG00000004248	patz1	50	31.414	ENSONIG00000020667	-	98	37.736
ENSONIG00000004248	patz1	59	32.340	ENSONIG00000015019	-	98	34.965
ENSONIG00000004248	patz1	53	31.600	ENSONIG00000018045	-	99	34.400
ENSONIG00000004248	patz1	56	30.882	ENSONIG00000018046	-	99	38.095
ENSONIG00000004248	patz1	53	32.599	ENSONIG00000017387	-	100	38.202
ENSONIG00000004248	patz1	52	31.214	ENSONIG00000000282	-	98	39.157
ENSONIG00000004248	patz1	53	34.559	ENSONIG00000003564	-	98	34.559
ENSONIG00000004248	patz1	52	30.345	ENSONIG00000016485	-	99	34.706
ENSONIG00000004248	patz1	50	37.778	ENSONIG00000005050	-	67	37.778
ENSONIG00000004248	patz1	51	33.649	ENSONIG00000018765	-	96	35.323
ENSONIG00000004248	patz1	57	39.130	ENSONIG00000012337	-	60	39.130
ENSONIG00000004248	patz1	50	34.419	ENSONIG00000018037	-	100	36.301
ENSONIG00000004248	patz1	53	35.185	ENSONIG00000007298	znf236	68	35.185
ENSONIG00000004248	patz1	54	30.242	ENSONIG00000002024	-	96	36.994
ENSONIG00000004248	patz1	50	33.544	ENSONIG00000013435	-	97	31.163
ENSONIG00000004248	patz1	57	34.109	ENSONIG00000013434	-	100	36.747
ENSONIG00000004248	patz1	50	30.709	ENSONIG00000007931	-	86	34.286
ENSONIG00000004248	patz1	52	39.000	ENSONIG00000006238	-	99	39.000
ENSONIG00000004248	patz1	50	34.437	ENSONIG00000014012	-	87	34.437
ENSONIG00000004248	patz1	50	33.108	ENSONIG00000007319	-	96	33.775
ENSONIG00000004248	patz1	60	32.353	ENSONIG00000011103	zbtb16b	60	32.353
ENSONIG00000004248	patz1	50	32.197	ENSONIG00000012825	-	95	34.000
ENSONIG00000004248	patz1	53	30.040	ENSONIG00000005489	-	99	35.784
ENSONIG00000004248	patz1	59	32.340	ENSONIG00000015166	-	100	36.471
ENSONIG00000004248	patz1	51	32.558	ENSONIG00000011061	znf319b	82	32.558
ENSONIG00000004248	patz1	56	30.638	ENSONIG00000013011	gfi1b	100	35.455
ENSONIG00000004248	patz1	50	30.952	ENSONIG00000007812	-	99	34.783
ENSONIG00000004248	patz1	50	33.632	ENSONIG00000007810	-	99	34.135
ENSONIG00000004248	patz1	57	32.275	ENSONIG00000007811	-	99	35.294
ENSONIG00000004248	patz1	53	30.315	ENSONIG00000019044	-	99	35.450
ENSONIG00000004248	patz1	73	30.000	ENSONIG00000010906	zbtb34	86	30.000
ENSONIG00000004248	patz1	59	43.373	ENSONIG00000007045	-	99	40.367
ENSONIG00000004248	patz1	50	36.242	ENSONIG00000011972	-	99	36.242
ENSONIG00000004248	patz1	52	30.516	ENSONIG00000017722	-	100	33.074
ENSONIG00000004248	patz1	67	31.839	ENSONIG00000018151	-	97	32.917
ENSONIG00000004248	patz1	70	30.222	ENSONIG00000009495	zbtb16a	64	30.222
ENSONIG00000004248	patz1	50	30.653	ENSONIG00000016416	-	100	34.302
ENSONIG00000004248	patz1	50	30.317	ENSONIG00000015164	-	99	34.028
ENSONIG00000004248	patz1	52	33.333	ENSONIG00000003856	-	99	39.286
ENSONIG00000004248	patz1	55	30.769	ENSONIG00000016758	scrt2	82	33.566
ENSONIG00000004248	patz1	52	31.387	ENSONIG00000007709	-	99	34.426
ENSONIG00000004248	patz1	67	31.330	ENSONIG00000004105	-	100	35.762
ENSONIG00000004248	patz1	52	31.760	ENSONIG00000001464	-	99	36.364
ENSONIG00000004248	patz1	53	34.395	ENSONIG00000017233	-	97	34.395
ENSONIG00000004248	patz1	87	32.677	ENSONIG00000000989	GZF1	95	34.646
ENSONIG00000004248	patz1	50	30.328	ENSONIG00000008188	-	99	33.758
ENSONIG00000004248	patz1	59	31.356	ENSONIG00000013676	-	100	31.984
ENSONIG00000004248	patz1	52	30.800	ENSONIG00000008182	-	97	34.286
ENSONIG00000004248	patz1	59	33.161	ENSONIG00000006707	-	87	33.161
ENSONIG00000004248	patz1	51	32.215	ENSONIG00000008277	-	99	33.498
ENSONIG00000004248	patz1	59	31.381	ENSONIG00000008273	-	98	36.527
ENSONIG00000004248	patz1	52	32.314	ENSONIG00000018286	-	97	32.314
ENSONIG00000004248	patz1	50	36.095	ENSONIG00000020719	-	95	40.964
ENSONIG00000004248	patz1	51	31.176	ENSONIG00000006007	scrt1b	84	34.028
ENSONIG00000004248	patz1	51	32.243	ENSONIG00000008984	-	81	32.243
ENSONIG00000004248	patz1	53	33.333	ENSONIG00000007559	-	100	33.333
ENSONIG00000004248	patz1	51	34.568	ENSONIG00000010292	-	100	34.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004248	patz1	100	58.712	ENSG00000100105	PATZ1	100	58.918	Homo_sapiens
ENSONIG00000004248	patz1	100	93.535	ENSAPOG00000018447	patz1	100	93.535	Acanthochromis_polyacanthus
ENSONIG00000004248	patz1	100	55.234	ENSAMEG00000007074	PATZ1	100	55.234	Ailuropoda_melanoleuca
ENSONIG00000004248	patz1	100	88.283	ENSACIG00000016779	patz1	100	88.283	Amphilophus_citrinellus
ENSONIG00000004248	patz1	100	91.590	ENSAPEG00000013354	patz1	100	91.590	Amphiprion_percula
ENSONIG00000004248	patz1	100	89.495	ENSATEG00000011260	patz1	100	89.495	Anabas_testudineus
ENSONIG00000004248	patz1	88	54.400	ENSAPLG00000003934	PATZ1	99	54.400	Anas_platyrhynchos
ENSONIG00000004248	patz1	100	58.712	ENSANAG00000029603	PATZ1	100	58.918	Aotus_nancymaae
ENSONIG00000004248	patz1	100	68.127	ENSAMXG00000002273	patz1	100	65.616	Astyanax_mexicanus
ENSONIG00000004248	patz1	100	58.565	ENSBTAG00000005478	PATZ1	100	58.772	Bos_taurus
ENSONIG00000004248	patz1	100	58.712	ENSCJAG00000010978	PATZ1	100	58.918	Callithrix_jacchus
ENSONIG00000004248	patz1	100	58.565	ENSCAFG00000013087	PATZ1	99	58.772	Canis_familiaris
ENSONIG00000004248	patz1	100	58.565	ENSCHIG00000020203	PATZ1	100	58.772	Capra_hircus
ENSONIG00000004248	patz1	100	58.858	ENSTSYG00000033183	PATZ1	100	59.064	Carlito_syrichta
ENSONIG00000004248	patz1	100	58.712	ENSCCAG00000028772	PATZ1	100	58.918	Cebus_capucinus
ENSONIG00000004248	patz1	100	58.712	ENSCATG00000006101	PATZ1	100	58.712	Cercocebus_atys
ENSONIG00000004248	patz1	100	55.524	ENSCPBG00000011277	PATZ1	100	56.084	Chrysemys_picta_bellii
ENSONIG00000004248	patz1	100	58.712	ENSCANG00000024972	PATZ1	100	58.712	Colobus_angolensis_palliatus
ENSONIG00000004248	patz1	100	57.101	ENSCGRG00001004071	Patz1	100	56.955	Cricetulus_griseus_chok1gshd
ENSONIG00000004248	patz1	93	57.277	ENSCGRG00000004814	Patz1	100	57.121	Cricetulus_griseus_crigri
ENSONIG00000004248	patz1	100	75.294	ENSCSEG00000001385	patz1	100	76.023	Cynoglossus_semilaevis
ENSONIG00000004248	patz1	100	85.823	ENSCVAG00000007684	patz1	100	85.976	Cyprinodon_variegatus
ENSONIG00000004248	patz1	100	67.123	ENSDARG00000076584	patz1	100	67.123	Danio_rerio
ENSONIG00000004248	patz1	85	60.659	ENSDNOG00000003183	PATZ1	100	54.141	Dasypus_novemcinctus
ENSONIG00000004248	patz1	100	58.712	ENSDORG00000023834	Patz1	100	58.918	Dipodomys_ordii
ENSONIG00000004248	patz1	100	58.712	ENSECAG00000025030	PATZ1	100	58.918	Equus_caballus
ENSONIG00000004248	patz1	100	76.634	ENSELUG00000002333	patz1	100	76.634	Esox_lucius
ENSONIG00000004248	patz1	100	58.565	ENSFCAG00000030253	PATZ1	100	58.772	Felis_catus
ENSONIG00000004248	patz1	89	54.358	ENSFALG00000007450	PATZ1	100	54.358	Ficedula_albicollis
ENSONIG00000004248	patz1	96	51.788	ENSFDAG00000005614	PATZ1	100	52.217	Fukomys_damarensis
ENSONIG00000004248	patz1	100	84.299	ENSFHEG00000014755	patz1	100	84.299	Fundulus_heteroclitus
ENSONIG00000004248	patz1	100	68.182	ENSGMOG00000001062	patz1	100	68.608	Gadus_morhua
ENSONIG00000004248	patz1	100	53.951	ENSGALG00000006934	PATZ1	100	54.422	Gallus_gallus
ENSONIG00000004248	patz1	100	87.786	ENSGAFG00000010053	patz1	100	87.786	Gambusia_affinis
ENSONIG00000004248	patz1	87	55.829	ENSGAGG00000003214	PATZ1	100	55.829	Gopherus_agassizii
ENSONIG00000004248	patz1	100	58.712	ENSGGOG00000017171	PATZ1	100	58.918	Gorilla_gorilla
ENSONIG00000004248	patz1	100	79.421	ENSHCOG00000017644	patz1	93	79.726	Hippocampus_comes
ENSONIG00000004248	patz1	100	68.008	ENSIPUG00000017653	patz1	99	68.008	Ictalurus_punctatus
ENSONIG00000004248	patz1	100	58.419	ENSSTOG00000020707	PATZ1	100	58.626	Ictidomys_tridecemlineatus
ENSONIG00000004248	patz1	100	57.329	ENSJJAG00000015259	Patz1	98	58.529	Jaculus_jaculus
ENSONIG00000004248	patz1	100	79.970	ENSKMAG00000008157	patz1	100	79.970	Kryptolebias_marmoratus
ENSONIG00000004248	patz1	100	56.180	ENSLAFG00000002317	PATZ1	100	56.180	Loxodonta_africana
ENSONIG00000004248	patz1	100	58.858	ENSMFAG00000040968	PATZ1	100	58.858	Macaca_fascicularis
ENSONIG00000004248	patz1	100	58.858	ENSMNEG00000037588	PATZ1	100	58.858	Macaca_nemestrina
ENSONIG00000004248	patz1	100	58.712	ENSMLEG00000030938	PATZ1	100	58.712	Mandrillus_leucophaeus
ENSONIG00000004248	patz1	100	89.144	ENSMAMG00000023652	patz1	100	89.144	Mastacembelus_armatus
ENSONIG00000004248	patz1	88	51.282	ENSMGAG00000008439	PATZ1	100	51.282	Meleagris_gallopavo
ENSONIG00000004248	patz1	100	58.419	ENSMAUG00000004129	Patz1	100	58.272	Mesocricetus_auratus
ENSONIG00000004248	patz1	100	58.712	ENSMICG00000005430	PATZ1	100	59.064	Microcebus_murinus
ENSONIG00000004248	patz1	100	58.565	ENSMOCG00000014488	Patz1	100	58.419	Microtus_ochrogaster
ENSONIG00000004248	patz1	100	78.384	ENSMMOG00000021679	patz1	100	78.384	Mola_mola
ENSONIG00000004248	patz1	100	87.156	ENSMALG00000021172	patz1	100	87.156	Monopterus_albus
ENSONIG00000004248	patz1	100	58.858	MGP_CAROLIEiJ_G0016007	Patz1	100	58.918	Mus_caroli
ENSONIG00000004248	patz1	100	58.858	ENSMUSG00000020453	Patz1	100	58.918	Mus_musculus
ENSONIG00000004248	patz1	100	58.858	MGP_PahariEiJ_G0016884	Patz1	100	58.918	Mus_pahari
ENSONIG00000004248	patz1	100	58.858	MGP_SPRETEiJ_G0016846	Patz1	100	58.918	Mus_spretus
ENSONIG00000004248	patz1	100	58.626	ENSMLUG00000009942	PATZ1	100	58.565	Myotis_lucifugus
ENSONIG00000004248	patz1	100	58.419	ENSNGAG00000010268	Patz1	100	58.480	Nannospalax_galili
ENSONIG00000004248	patz1	100	89.193	ENSNBRG00000016032	patz1	100	89.495	Neolamprologus_brichardi
ENSONIG00000004248	patz1	68	52.305	ENSMEUG00000016293	PATZ1	100	52.305	Notamacropus_eugenii
ENSONIG00000004248	patz1	100	58.565	ENSODEG00000003589	PATZ1	100	58.772	Octodon_degus
ENSONIG00000004248	patz1	100	55.617	ENSOANG00000014654	PATZ1	100	55.895	Ornithorhynchus_anatinus
ENSONIG00000004248	patz1	100	83.537	ENSORLG00020010937	patz1	100	83.537	Oryzias_latipes_hni
ENSONIG00000004248	patz1	100	83.792	ENSORLG00015007396	patz1	100	83.792	Oryzias_latipes_hsok
ENSONIG00000004248	patz1	100	85.168	ENSOMEG00000006636	patz1	100	85.168	Oryzias_melastigma
ENSONIG00000004248	patz1	100	55.310	ENSOGAG00000027905	PATZ1	100	55.510	Otolemur_garnettii
ENSONIG00000004248	patz1	100	58.712	ENSPPAG00000033227	PATZ1	100	58.918	Pan_paniscus
ENSONIG00000004248	patz1	100	58.565	ENSPPRG00000001573	PATZ1	100	58.772	Panthera_pardus
ENSONIG00000004248	patz1	88	54.560	ENSPTIG00000007937	PATZ1	91	54.531	Panthera_tigris_altaica
ENSONIG00000004248	patz1	100	58.712	ENSPTRG00000014268	PATZ1	100	58.918	Pan_troglodytes
ENSONIG00000004248	patz1	100	58.712	ENSPANG00000006821	PATZ1	98	58.712	Papio_anubis
ENSONIG00000004248	patz1	100	72.179	ENSPKIG00000019584	patz1	100	72.179	Paramormyrops_kingsleyae
ENSONIG00000004248	patz1	64	63.636	ENSPSIG00000011562	-	100	63.636	Pelodiscus_sinensis
ENSONIG00000004248	patz1	72	58.268	ENSPSIG00000016553	-	92	57.045	Pelodiscus_sinensis
ENSONIG00000004248	patz1	100	76.788	ENSPMGG00000010196	patz1	100	76.788	Periophthalmus_magnuspinnatus
ENSONIG00000004248	patz1	100	58.419	ENSPEMG00000005321	Patz1	100	58.419	Peromyscus_maniculatus_bairdii
ENSONIG00000004248	patz1	100	87.500	ENSPLAG00000010425	patz1	100	87.500	Poecilia_latipinna
ENSONIG00000004248	patz1	100	87.634	ENSPMEG00000000255	patz1	100	87.634	Poecilia_mexicana
ENSONIG00000004248	patz1	100	82.421	ENSPREG00000002440	patz1	100	82.421	Poecilia_reticulata
ENSONIG00000004248	patz1	100	55.172	ENSPPYG00000011732	PATZ1	100	55.372	Pongo_abelii
ENSONIG00000004248	patz1	100	58.712	ENSPCOG00000019729	PATZ1	100	59.064	Propithecus_coquereli
ENSONIG00000004248	patz1	100	55.034	ENSPVAG00000001749	PATZ1	100	55.234	Pteropus_vampyrus
ENSONIG00000004248	patz1	100	99.235	ENSPNYG00000013542	patz1	100	99.235	Pundamilia_nyererei
ENSONIG00000004248	patz1	87	60.630	ENSPNAG00000017222	patz1	100	60.630	Pygocentrus_nattereri
ENSONIG00000004248	patz1	100	58.712	ENSRBIG00000044231	PATZ1	100	58.712	Rhinopithecus_bieti
ENSONIG00000004248	patz1	100	58.712	ENSRROG00000037155	PATZ1	100	58.712	Rhinopithecus_roxellana
ENSONIG00000004248	patz1	100	58.712	ENSSBOG00000003894	PATZ1	100	58.918	Saimiri_boliviensis_boliviensis
ENSONIG00000004248	patz1	82	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSONIG00000004248	patz1	99	55.587	ENSSPUG00000015298	PATZ1	97	55.870	Sphenodon_punctatus
ENSONIG00000004248	patz1	87	58.793	ENSSSCG00000010027	PATZ1	100	58.793	Sus_scrofa
ENSONIG00000004248	patz1	100	81.429	ENSTRUG00000015366	patz1	100	81.429	Takifugu_rubripes
ENSONIG00000004248	patz1	100	54.897	ENSTTRG00000010279	PATZ1	100	55.096	Tursiops_truncatus
ENSONIG00000004248	patz1	100	58.565	ENSUAMG00000015014	PATZ1	100	58.772	Ursus_americanus
ENSONIG00000004248	patz1	100	52.557	ENSXETG00000004190	patz1	100	53.561	Xenopus_tropicalis
ENSONIG00000004248	patz1	100	88.397	ENSXMAG00000015531	patz1	100	88.397	Xiphophorus_maculatus