EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000004264 (Gene tree)
Gene ID: -
Gene Symbol: rrp1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9437 bases
Position: chrGL831155.1:84710-94146
Accession: ZDB-GENE-030131-9837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005368	Nop52	PF05997.12	7.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005372	-	2986	-	ENSONIP00000005368	685 (aa)	-	I3J928

Gene Model

Click here to download ENSONIG00000004264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004264	rrp1	98	36.145	ENSG00000160208	RRP1B	61	51.282	Homo_sapiens
ENSONIG00000004264	rrp1	64	50.000	ENSAMEG00000011401	RRP1B	63	50.877	Ailuropoda_melanoleuca
ENSONIG00000004264	rrp1	55	76.761	ENSACIG00000019121	rrp1	59	77.032	Amphilophus_citrinellus
ENSONIG00000004264	rrp1	59	84.615	ENSAOCG00000017894	-	88	76.596	Amphiprion_ocellaris
ENSONIG00000004264	rrp1	67	75.424	ENSAPEG00000024150	-	50	75.424	Amphiprion_percula
ENSONIG00000004264	rrp1	99	36.088	ENSCAFG00000010621	RRP1B	64	37.445	Canis_familiaris
ENSONIG00000004264	rrp1	50	57.292	ENSCAFG00000010646	RRP1	79	43.052	Canis_familiaris
ENSONIG00000004264	rrp1	98	36.427	ENSCAFG00020018901	RRP1B	60	36.674	Canis_lupus_dingo
ENSONIG00000004264	rrp1	54	42.500	ENSCAFG00020018979	RRP1	79	43.052	Canis_lupus_dingo
ENSONIG00000004264	rrp1	98	34.933	ENSCCAG00000029384	RRP1B	53	43.182	Cebus_capucinus
ENSONIG00000004264	rrp1	50	44.875	ENSCLAG00000011639	RRP1	67	49.832	Chinchilla_lanigera
ENSONIG00000004264	rrp1	98	36.401	ENSCSAG00000007961	RRP1B	61	52.632	Chlorocebus_sabaeus
ENSONIG00000004264	rrp1	54	33.773	ENSCING00000003304	-	66	38.225	Ciona_intestinalis
ENSONIG00000004264	rrp1	98	36.977	ENSCANG00000040952	RRP1B	61	51.754	Colobus_angolensis_palliatus
ENSONIG00000004264	rrp1	50	45.330	ENSCGRG00001011920	Rrp1	69	48.515	Cricetulus_griseus_chok1gshd
ENSONIG00000004264	rrp1	50	45.330	ENSCGRG00000008915	Rrp1	69	48.515	Cricetulus_griseus_crigri
ENSONIG00000004264	rrp1	61	61.027	ENSCSEG00000020711	-	80	59.420	Cynoglossus_semilaevis
ENSONIG00000004264	rrp1	50	42.935	ENSDNOG00000019880	RRP1	67	47.987	Dasypus_novemcinctus
ENSONIG00000004264	rrp1	60	52.222	ENSETEG00000019489	RRP1B	52	54.255	Echinops_telfairi
ENSONIG00000004264	rrp1	56	39.364	ENSEASG00005001673	RRP1	68	47.855	Equus_asinus_asinus
ENSONIG00000004264	rrp1	56	38.631	ENSECAG00000015703	RRP1	69	48.525	Equus_caballus
ENSONIG00000004264	rrp1	60	64.167	ENSELUG00000015885	-	81	59.401	Esox_lucius
ENSONIG00000004264	rrp1	53	42.895	ENSFCAG00000008434	RRP1	68	47.386	Felis_catus
ENSONIG00000004264	rrp1	50	46.761	ENSFDAG00000013728	RRP1	66	51.042	Fukomys_damarensis
ENSONIG00000004264	rrp1	78	64.754	ENSFHEG00000016314	-	68	63.836	Fundulus_heteroclitus
ENSONIG00000004264	rrp1	67	64.310	ENSGMOG00000001953	-	67	64.052	Gadus_morhua
ENSONIG00000004264	rrp1	99	48.429	ENSGACG00000001438	rrp1	69	67.066	Gasterosteus_aculeatus
ENSONIG00000004264	rrp1	98	36.145	ENSGGOG00000012069	RRP1B	61	51.282	Gorilla_gorilla
ENSONIG00000004264	rrp1	81	71.407	ENSHBUG00000003766	-	61	83.162	Haplochromis_burtoni
ENSONIG00000004264	rrp1	67	40.237	ENSHGLG00100002232	RRP1B	63	44.755	Heterocephalus_glaber_male
ENSONIG00000004264	rrp1	60	66.667	ENSHCOG00000018388	-	57	66.667	Hippocampus_comes
ENSONIG00000004264	rrp1	53	74.359	ENSIPUG00000000673	-	63	51.964	Ictalurus_punctatus
ENSONIG00000004264	rrp1	51	44.290	ENSSTOG00000011116	RRP1	68	49.301	Ictidomys_tridecemlineatus
ENSONIG00000004264	rrp1	54	43.005	ENSJJAG00000018886	Rrp1	77	46.269	Jaculus_jaculus
ENSONIG00000004264	rrp1	65	66.667	ENSKMAG00000005539	rrp1	72	66.667	Kryptolebias_marmoratus
ENSONIG00000004264	rrp1	62	58.621	ENSLOCG00000004064	-	59	58.621	Lepisosteus_oculatus
ENSONIG00000004264	rrp1	91	33.286	ENSLAFG00000000766	RRP1B	73	45.687	Loxodonta_africana
ENSONIG00000004264	rrp1	51	44.474	ENSMFAG00000003202	RRP1	66	48.197	Macaca_fascicularis
ENSONIG00000004264	rrp1	50	44.505	ENSMMUG00000012304	RRP1	66	48.344	Macaca_mulatta
ENSONIG00000004264	rrp1	51	44.384	ENSMNEG00000031210	RRP1	66	48.344	Macaca_nemestrina
ENSONIG00000004264	rrp1	51	44.624	ENSMLEG00000037797	RRP1	72	48.515	Mandrillus_leucophaeus
ENSONIG00000004264	rrp1	99	36.510	ENSMLEG00000040044	RRP1B	50	42.737	Mandrillus_leucophaeus
ENSONIG00000004264	rrp1	56	52.000	MGP_CAROLIEiJ_G0015508	Rrp1	61	51.667	Mus_caroli
ENSONIG00000004264	rrp1	67	88.940	ENSNBRG00000021980	-	80	92.342	Neolamprologus_brichardi
ENSONIG00000004264	rrp1	97	61.404	ENSORLG00020007199	-	53	63.380	Oryzias_latipes_hni
ENSONIG00000004264	rrp1	65	62.849	ENSORLG00015004425	-	53	63.944	Oryzias_latipes_hsok
ENSONIG00000004264	rrp1	54	56.818	ENSOGAG00000009872	RRP1B	61	56.818	Otolemur_garnettii
ENSONIG00000004264	rrp1	99	36.364	ENSPPAG00000035319	RRP1B	63	51.282	Pan_paniscus
ENSONIG00000004264	rrp1	53	36.693	ENSPTIG00000019473	RRP1	71	40.909	Panthera_tigris_altaica
ENSONIG00000004264	rrp1	64	52.500	ENSPTIG00000016894	RRP1B	77	53.846	Panthera_tigris_altaica
ENSONIG00000004264	rrp1	98	36.253	ENSPTRG00000013958	RRP1B	61	51.282	Pan_troglodytes
ENSONIG00000004264	rrp1	50	44.565	ENSPEMG00000018421	Rrp1	77	46.221	Peromyscus_maniculatus_bairdii
ENSONIG00000004264	rrp1	57	39.277	ENSPCIG00000015523	-	67	45.928	Phascolarctos_cinereus
ENSONIG00000004264	rrp1	80	64.326	ENSPMEG00000007042	-	57	64.045	Poecilia_mexicana
ENSONIG00000004264	rrp1	76	62.921	ENSPREG00000015673	-	59	62.921	Poecilia_reticulata
ENSONIG00000004264	rrp1	51	43.617	ENSPPYG00000011474	RRP1	73	45.294	Pongo_abelii
ENSONIG00000004264	rrp1	98	36.156	ENSPPYG00000011470	RRP1B	61	50.877	Pongo_abelii
ENSONIG00000004264	rrp1	98	34.543	ENSRBIG00000041689	RRP1B	60	51.754	Rhinopithecus_bieti
ENSONIG00000004264	rrp1	98	36.559	ENSRROG00000031499	RRP1B	61	51.754	Rhinopithecus_roxellana
ENSONIG00000004264	rrp1	99	34.581	ENSSBOG00000034727	RRP1B	51	40.365	Saimiri_boliviensis_boliviensis
ENSONIG00000004264	rrp1	53	83.333	ENSSMAG00000016847	-	81	64.118	Scophthalmus_maximus
ENSONIG00000004264	rrp1	62	74.790	ENSSDUG00000000551	-	56	74.790	Seriola_dumerili
ENSONIG00000004264	rrp1	62	73.950	ENSSLDG00000002538	-	51	80.851	Seriola_lalandi_dorsalis
ENSONIG00000004264	rrp1	54	48.246	ENSSARG00000003108	-	57	49.123	Sorex_araneus
ENSONIG00000004264	rrp1	60	46.715	ENSSPUG00000002834	RRP1B	61	46.715	Sphenodon_punctatus
ENSONIG00000004264	rrp1	62	73.729	ENSSPAG00000005370	-	50	73.729	Stegastes_partitus
ENSONIG00000004264	rrp1	79	56.091	ENSTNIG00000005053	rrp1	66	66.113	Tetraodon_nigroviridis
ENSONIG00000004264	rrp1	69	45.808	ENSTBEG00000000422	RRP1B	69	47.826	Tupaia_belangeri
ENSONIG00000004264	rrp1	98	35.944	ENSUAMG00000026765	RRP1B	51	42.407	Ursus_americanus
ENSONIG00000004264	rrp1	96	41.643	ENSUMAG00000025510	RRP1B	92	45.714	Ursus_maritimus
ENSONIG00000004264	rrp1	99	36.214	ENSVVUG00000024509	RRP1B	51	42.265	Vulpes_vulpes
ENSONIG00000004264	rrp1	60	45.545	ENSXETG00000013683	rrp1b	58	47.253	Xenopus_tropicalis
ENSONIG00000004264	rrp1	80	62.022	ENSXMAG00000023123	-	57	62.022	Xiphophorus_maculatus