EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004281 (Gene tree)
Gene ID: 100696609
Gene Symbol: rabl3
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 2680 bases
Position: chrGL831155.1:412827-415506
Accession: 100696609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005392	MMR_HSR1	PF01926.23	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005396	-	702	-	ENSONIP00000005392	233 (aa)	XP_003443325	I3J952

Gene Model

Click here to download ENSONIG00000004281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004281	rabl3	52	32.231	ENSONIG00000008545	RAB39B	53	32.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004281	rabl3	100	86.017	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSONIG00000004281	rabl3	100	98.718	ENSAPOG00000024479	rabl3	100	98.718	Acanthochromis_polyacanthus
ENSONIG00000004281	rabl3	100	86.864	ENSAMEG00000004809	RABL3	100	86.864	Ailuropoda_melanoleuca
ENSONIG00000004281	rabl3	100	93.991	ENSACIG00000014343	rabl3	100	93.991	Amphilophus_citrinellus
ENSONIG00000004281	rabl3	100	98.718	ENSAOCG00000011851	rabl3	100	98.718	Amphiprion_ocellaris
ENSONIG00000004281	rabl3	100	98.718	ENSAPEG00000011214	rabl3	100	98.718	Amphiprion_percula
ENSONIG00000004281	rabl3	100	98.283	ENSATEG00000003503	rabl3	100	98.283	Anabas_testudineus
ENSONIG00000004281	rabl3	100	81.356	ENSACAG00000011313	-	100	81.356	Anolis_carolinensis
ENSONIG00000004281	rabl3	100	88.136	ENSANAG00000027278	RABL3	100	88.136	Aotus_nancymaae
ENSONIG00000004281	rabl3	100	99.142	ENSACLG00000009820	rabl3	100	99.142	Astatotilapia_calliptera
ENSONIG00000004281	rabl3	100	94.850	ENSAMXG00000038716	rabl3	100	94.850	Astyanax_mexicanus
ENSONIG00000004281	rabl3	100	88.559	ENSBTAG00000015898	RABL3	100	88.559	Bos_taurus
ENSONIG00000004281	rabl3	100	88.136	ENSCJAG00000008611	RABL3	100	88.136	Callithrix_jacchus
ENSONIG00000004281	rabl3	100	87.712	ENSCAFG00000011292	RABL3	89	87.712	Canis_familiaris
ENSONIG00000004281	rabl3	100	87.712	ENSCAFG00020006397	RABL3	100	87.712	Canis_lupus_dingo
ENSONIG00000004281	rabl3	100	88.559	ENSCHIG00000017365	RABL3	100	88.559	Capra_hircus
ENSONIG00000004281	rabl3	100	86.441	ENSCPOG00000009645	RABL3	100	86.441	Cavia_porcellus
ENSONIG00000004281	rabl3	100	86.441	ENSCATG00000032561	RABL3	100	86.441	Cercocebus_atys
ENSONIG00000004281	rabl3	100	86.017	ENSCLAG00000010855	RABL3	100	86.017	Chinchilla_lanigera
ENSONIG00000004281	rabl3	99	86.266	ENSCSAG00000007155	RABL3	100	86.266	Chlorocebus_sabaeus
ENSONIG00000004281	rabl3	100	86.864	ENSCPBG00000001999	RABL3	100	86.864	Chrysemys_picta_bellii
ENSONIG00000004281	rabl3	100	86.441	ENSCANG00000031684	RABL3	100	86.441	Colobus_angolensis_palliatus
ENSONIG00000004281	rabl3	100	83.898	ENSCGRG00001021537	Rabl3	100	83.898	Cricetulus_griseus_chok1gshd
ENSONIG00000004281	rabl3	100	83.898	ENSCGRG00000002114	Rabl3	100	83.898	Cricetulus_griseus_crigri
ENSONIG00000004281	rabl3	100	83.691	ENSCSEG00000014982	rabl3	100	83.691	Cynoglossus_semilaevis
ENSONIG00000004281	rabl3	100	81.116	ENSCVAG00000009904	rabl3	100	81.116	Cyprinodon_variegatus
ENSONIG00000004281	rabl3	100	94.421	ENSDARG00000040959	rabl3	100	94.421	Danio_rerio
ENSONIG00000004281	rabl3	100	86.441	ENSDNOG00000008174	RABL3	100	86.441	Dasypus_novemcinctus
ENSONIG00000004281	rabl3	100	86.017	ENSETEG00000010206	RABL3	100	86.017	Echinops_telfairi
ENSONIG00000004281	rabl3	100	88.136	ENSECAG00000023059	RABL3	100	88.136	Equus_caballus
ENSONIG00000004281	rabl3	100	82.203	ENSEEUG00000002897	RABL3	100	82.203	Erinaceus_europaeus
ENSONIG00000004281	rabl3	100	93.991	ENSELUG00000014758	rabl3	100	93.991	Esox_lucius
ENSONIG00000004281	rabl3	100	87.712	ENSFCAG00000031879	RABL3	100	77.966	Felis_catus
ENSONIG00000004281	rabl3	100	84.746	ENSFALG00000005296	RABL3	100	84.746	Ficedula_albicollis
ENSONIG00000004281	rabl3	100	86.809	ENSFDAG00000000307	RABL3	100	86.809	Fukomys_damarensis
ENSONIG00000004281	rabl3	100	94.850	ENSFHEG00000011273	rabl3	100	94.850	Fundulus_heteroclitus
ENSONIG00000004281	rabl3	100	94.850	ENSGMOG00000007845	rabl3	100	94.850	Gadus_morhua
ENSONIG00000004281	rabl3	100	86.017	ENSGALG00000014949	RABL3	100	86.017	Gallus_gallus
ENSONIG00000004281	rabl3	100	94.421	ENSGAFG00000015953	rabl3	100	94.421	Gambusia_affinis
ENSONIG00000004281	rabl3	100	94.421	ENSGACG00000007387	rabl3	100	95.349	Gasterosteus_aculeatus
ENSONIG00000004281	rabl3	100	87.288	ENSGAGG00000003677	RABL3	100	87.288	Gopherus_agassizii
ENSONIG00000004281	rabl3	100	86.017	ENSGGOG00000006059	RABL3	100	86.017	Gorilla_gorilla
ENSONIG00000004281	rabl3	100	99.571	ENSHBUG00000019478	rabl3	93	99.571	Haplochromis_burtoni
ENSONIG00000004281	rabl3	100	86.809	ENSHGLG00000014491	RABL3	100	86.809	Heterocephalus_glaber_female
ENSONIG00000004281	rabl3	100	86.809	ENSHGLG00100004866	RABL3	100	86.809	Heterocephalus_glaber_male
ENSONIG00000004281	rabl3	100	83.262	ENSHCOG00000019245	rabl3	100	83.262	Hippocampus_comes
ENSONIG00000004281	rabl3	100	92.704	ENSIPUG00000012657	rabl3	100	92.704	Ictalurus_punctatus
ENSONIG00000004281	rabl3	100	86.017	ENSSTOG00000019452	RABL3	100	86.017	Ictidomys_tridecemlineatus
ENSONIG00000004281	rabl3	100	76.695	ENSJJAG00000023553	Rabl3	100	76.695	Jaculus_jaculus
ENSONIG00000004281	rabl3	100	91.416	ENSKMAG00000015464	rabl3	100	91.416	Kryptolebias_marmoratus
ENSONIG00000004281	rabl3	100	97.436	ENSLBEG00000010627	-	100	97.436	Labrus_bergylta
ENSONIG00000004281	rabl3	100	97.436	ENSLBEG00000020595	rabl3	100	97.436	Labrus_bergylta
ENSONIG00000004281	rabl3	100	88.983	ENSLOCG00000006265	rabl3	100	88.983	Lepisosteus_oculatus
ENSONIG00000004281	rabl3	100	87.288	ENSLAFG00000003711	RABL3	100	87.288	Loxodonta_africana
ENSONIG00000004281	rabl3	100	86.441	ENSMFAG00000031923	RABL3	100	86.441	Macaca_fascicularis
ENSONIG00000004281	rabl3	100	76.695	ENSMMUG00000001594	RABL3	100	76.695	Macaca_mulatta
ENSONIG00000004281	rabl3	100	86.441	ENSMNEG00000043980	RABL3	100	86.441	Macaca_nemestrina
ENSONIG00000004281	rabl3	100	86.441	ENSMLEG00000028177	RABL3	100	86.441	Mandrillus_leucophaeus
ENSONIG00000004281	rabl3	100	98.283	ENSMAMG00000015155	rabl3	100	98.283	Mastacembelus_armatus
ENSONIG00000004281	rabl3	100	99.142	ENSMZEG00005002607	rabl3	100	99.142	Maylandia_zebra
ENSONIG00000004281	rabl3	100	83.898	ENSMAUG00000013022	Rabl3	100	83.898	Mesocricetus_auratus
ENSONIG00000004281	rabl3	100	87.288	ENSMICG00000049288	RABL3	100	87.288	Microcebus_murinus
ENSONIG00000004281	rabl3	100	83.475	ENSMOCG00000015237	Rabl3	100	83.475	Microtus_ochrogaster
ENSONIG00000004281	rabl3	100	92.766	ENSMMOG00000005628	rabl3	100	92.766	Mola_mola
ENSONIG00000004281	rabl3	100	87.288	ENSMODG00000018232	RABL3	100	87.288	Monodelphis_domestica
ENSONIG00000004281	rabl3	100	90.254	ENSMALG00000018837	rabl3	100	90.254	Monopterus_albus
ENSONIG00000004281	rabl3	100	83.898	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSONIG00000004281	rabl3	100	83.898	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSONIG00000004281	rabl3	100	83.475	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSONIG00000004281	rabl3	100	83.898	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSONIG00000004281	rabl3	100	87.712	ENSMPUG00000008257	RABL3	89	87.712	Mustela_putorius_furo
ENSONIG00000004281	rabl3	100	86.864	ENSMLUG00000014113	RABL3	100	86.864	Myotis_lucifugus
ENSONIG00000004281	rabl3	99	76.957	ENSNGAG00000001939	Rabl3	99	76.957	Nannospalax_galili
ENSONIG00000004281	rabl3	93	99.078	ENSNBRG00000012423	rabl3	92	99.078	Neolamprologus_brichardi
ENSONIG00000004281	rabl3	100	86.017	ENSNLEG00000031723	RABL3	100	86.017	Nomascus_leucogenys
ENSONIG00000004281	rabl3	100	86.441	ENSMEUG00000006606	RABL3	100	86.441	Notamacropus_eugenii
ENSONIG00000004281	rabl3	100	86.017	ENSODEG00000004758	-	100	86.017	Octodon_degus
ENSONIG00000004281	rabl3	99	85.470	ENSOANG00000003928	RABL3	99	85.470	Ornithorhynchus_anatinus
ENSONIG00000004281	rabl3	100	96.137	ENSORLG00000020457	rabl3	100	96.137	Oryzias_latipes
ENSONIG00000004281	rabl3	100	96.137	ENSORLG00020008991	rabl3	100	91.416	Oryzias_latipes_hni
ENSONIG00000004281	rabl3	100	96.137	ENSORLG00015005649	rabl3	88	96.137	Oryzias_latipes_hsok
ENSONIG00000004281	rabl3	100	97.425	ENSOMEG00000015066	rabl3	100	97.425	Oryzias_melastigma
ENSONIG00000004281	rabl3	100	86.441	ENSOGAG00000005961	RABL3	100	86.441	Otolemur_garnettii
ENSONIG00000004281	rabl3	100	88.559	ENSOARG00000019939	RABL3	100	88.559	Ovis_aries
ENSONIG00000004281	rabl3	94	84.685	ENSPPAG00000036997	RABL3	87	84.685	Pan_paniscus
ENSONIG00000004281	rabl3	100	87.712	ENSPPRG00000016325	RABL3	100	87.712	Panthera_pardus
ENSONIG00000004281	rabl3	100	87.712	ENSPTIG00000018021	RABL3	100	87.712	Panthera_tigris_altaica
ENSONIG00000004281	rabl3	100	86.017	ENSPTRG00000015272	RABL3	100	86.017	Pan_troglodytes
ENSONIG00000004281	rabl3	100	86.441	ENSPANG00000001339	RABL3	100	86.441	Papio_anubis
ENSONIG00000004281	rabl3	100	94.421	ENSPKIG00000007818	rabl3	100	94.421	Paramormyrops_kingsleyae
ENSONIG00000004281	rabl3	100	86.441	ENSPSIG00000011358	RABL3	100	86.441	Pelodiscus_sinensis
ENSONIG00000004281	rabl3	100	90.558	ENSPMGG00000015794	rabl3	100	90.558	Periophthalmus_magnuspinnatus
ENSONIG00000004281	rabl3	100	83.898	ENSPEMG00000016913	Rabl3	100	83.898	Peromyscus_maniculatus_bairdii
ENSONIG00000004281	rabl3	100	86.441	ENSPCIG00000018922	RABL3	100	86.441	Phascolarctos_cinereus
ENSONIG00000004281	rabl3	100	96.137	ENSPFOG00000008586	rabl3	100	96.137	Poecilia_formosa
ENSONIG00000004281	rabl3	100	96.137	ENSPLAG00000014482	rabl3	100	96.137	Poecilia_latipinna
ENSONIG00000004281	rabl3	100	96.137	ENSPMEG00000002295	rabl3	100	96.137	Poecilia_mexicana
ENSONIG00000004281	rabl3	100	95.708	ENSPREG00000014815	rabl3	100	95.708	Poecilia_reticulata
ENSONIG00000004281	rabl3	100	86.441	ENSPPYG00000013501	RABL3	100	86.441	Pongo_abelii
ENSONIG00000004281	rabl3	100	87.712	ENSPCOG00000022230	RABL3	100	87.712	Propithecus_coquereli
ENSONIG00000004281	rabl3	100	86.017	ENSPVAG00000010013	RABL3	100	86.017	Pteropus_vampyrus
ENSONIG00000004281	rabl3	100	99.571	ENSPNYG00000006659	rabl3	100	99.571	Pundamilia_nyererei
ENSONIG00000004281	rabl3	100	96.567	ENSPNAG00000000748	rabl3	100	96.567	Pygocentrus_nattereri
ENSONIG00000004281	rabl3	100	83.475	ENSRNOG00000026085	Rabl3	100	83.475	Rattus_norvegicus
ENSONIG00000004281	rabl3	100	86.441	ENSRBIG00000040941	RABL3	100	86.441	Rhinopithecus_bieti
ENSONIG00000004281	rabl3	100	86.441	ENSRROG00000043745	RABL3	100	86.441	Rhinopithecus_roxellana
ENSONIG00000004281	rabl3	100	88.136	ENSSBOG00000004022	RABL3	100	88.136	Saimiri_boliviensis_boliviensis
ENSONIG00000004281	rabl3	100	85.593	ENSSHAG00000012233	RABL3	100	85.593	Sarcophilus_harrisii
ENSONIG00000004281	rabl3	100	94.421	ENSSFOG00015010171	rabl3	100	94.421	Scleropages_formosus
ENSONIG00000004281	rabl3	100	97.009	ENSSMAG00000002403	rabl3	100	97.009	Scophthalmus_maximus
ENSONIG00000004281	rabl3	100	98.712	ENSSDUG00000012078	rabl3	100	98.712	Seriola_dumerili
ENSONIG00000004281	rabl3	100	99.142	ENSSLDG00000021899	rabl3	100	99.142	Seriola_lalandi_dorsalis
ENSONIG00000004281	rabl3	100	87.288	ENSSARG00000008316	RABL3	100	87.288	Sorex_araneus
ENSONIG00000004281	rabl3	100	86.441	ENSSPUG00000017490	RABL3	100	86.441	Sphenodon_punctatus
ENSONIG00000004281	rabl3	100	99.142	ENSSPAG00000011642	rabl3	100	99.142	Stegastes_partitus
ENSONIG00000004281	rabl3	100	88.136	ENSSSCG00000035258	RABL3	100	88.136	Sus_scrofa
ENSONIG00000004281	rabl3	100	85.169	ENSTGUG00000013374	RABL3	100	85.169	Taeniopygia_guttata
ENSONIG00000004281	rabl3	80	92.632	ENSTRUG00000007846	RABL3	100	97.656	Takifugu_rubripes
ENSONIG00000004281	rabl3	100	74.153	ENSTBEG00000005153	RABL3	100	74.153	Tupaia_belangeri
ENSONIG00000004281	rabl3	100	86.864	ENSUAMG00000005299	RABL3	100	86.864	Ursus_americanus
ENSONIG00000004281	rabl3	100	86.441	ENSUMAG00000025256	RABL3	89	86.441	Ursus_maritimus
ENSONIG00000004281	rabl3	100	88.136	ENSVPAG00000003776	RABL3	100	88.136	Vicugna_pacos
ENSONIG00000004281	rabl3	100	87.712	ENSVVUG00000022300	RABL3	89	87.712	Vulpes_vulpes
ENSONIG00000004281	rabl3	100	95.708	ENSXMAG00000003244	rabl3	100	95.708	Xiphophorus_maculatus