EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 2094 bases
Position: chrGL831197.1:2428987-2431080
Accession: 100691547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005471	MMR_HSR1	PF01926.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005475	-	540	-	ENSONIP00000005471	179 (aa)	XP_019214731	I3J9D1

Gene Model

Click here to download ENSONIG00000004340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004340	-	77	35.252	ENSONIG00000004057	arl8ba	75	35.252
ENSONIG00000004340	-	99	41.011	ENSONIG00000000890	arl5c	98	41.011
ENSONIG00000004340	-	94	48.588	ENSONIG00000021039	arl4ca	91	49.162
ENSONIG00000004340	-	79	35.915	ENSONIG00000020279	arl8bb	76	35.915
ENSONIG00000004340	-	98	65.537	ENSONIG00000009484	-	98	65.537
ENSONIG00000004340	-	78	36.170	ENSONIG00000014667	arl8a	75	36.170
ENSONIG00000004340	-	91	30.286	ENSONIG00000018509	sar1ab	88	30.286
ENSONIG00000004340	-	91	32.203	ENSONIG00000016100	-	89	32.203
ENSONIG00000004340	-	92	40.860	ENSONIG00000004329	-	89	40.860
ENSONIG00000004340	-	87	45.679	ENSONIG00000009954	arl14	78	45.679
ENSONIG00000004340	-	90	45.062	ENSONIG00000015815	arl3	87	45.062
ENSONIG00000004340	-	91	44.172	ENSONIG00000000203	-	89	44.172
ENSONIG00000004340	-	98	66.102	ENSONIG00000019062	arf3b	98	66.102
ENSONIG00000004340	-	100	51.111	ENSONIG00000009921	arl1	99	51.111
ENSONIG00000004340	-	89	49.405	ENSONIG00000021291	-	84	49.405
ENSONIG00000004340	-	94	42.938	ENSONIG00000003403	ARL4D	88	42.938
ENSONIG00000004340	-	100	43.889	ENSONIG00000017021	arl5a	100	43.889
ENSONIG00000004340	-	93	50.286	ENSONIG00000003641	-	74	50.286
ENSONIG00000004340	-	91	30.857	ENSONIG00000017278	sar1b	88	30.857
ENSONIG00000004340	-	98	67.797	ENSONIG00000018115	arf2b	98	67.797
ENSONIG00000004340	-	97	45.143	ENSONIG00000006036	arl8	97	45.143
ENSONIG00000004340	-	99	69.274	ENSONIG00000014890	-	99	69.274
ENSONIG00000004340	-	91	47.929	ENSONIG00000021238	arl4d	84	47.929
ENSONIG00000004340	-	91	41.317	ENSONIG00000003098	ARL6	90	41.317
ENSONIG00000004340	-	93	44.910	ENSONIG00000013045	arl3l2	89	44.910
ENSONIG00000004340	-	89	50.299	ENSONIG00000020477	arl4aa	84	50.299
ENSONIG00000004340	-	98	66.667	ENSONIG00000001286	-	98	66.667
ENSONIG00000004340	-	94	44.706	ENSONIG00000017639	arl11	93	45.399
ENSONIG00000004340	-	92	47.904	ENSONIG00000013539	arl2	90	47.904
ENSONIG00000004340	-	98	66.102	ENSONIG00000012147	-	98	66.102
ENSONIG00000004340	-	96	35.519	ENSONIG00000005124	arfrp1	91	35.519
ENSONIG00000004340	-	79	60.993	ENSONIG00000000864	-	90	60.993
ENSONIG00000004340	-	100	70.556	ENSONIG00000007594	arf5	100	70.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004340	-	100	83.240	ENSAPEG00000002838	-	100	83.240	Amphiprion_percula
ENSONIG00000004340	-	99	83.146	ENSATEG00000003847	-	99	83.146	Anabas_testudineus
ENSONIG00000004340	-	90	80.124	ENSATEG00000003808	-	92	80.124	Anabas_testudineus
ENSONIG00000004340	-	95	98.235	ENSACLG00000009822	-	91	98.235	Astatotilapia_calliptera
ENSONIG00000004340	-	82	76.027	ENSCVAG00000013902	-	89	76.027	Cyprinodon_variegatus
ENSONIG00000004340	-	87	82.692	ENSFHEG00000019659	-	88	82.692	Fundulus_heteroclitus
ENSONIG00000004340	-	60	86.111	ENSGAFG00000002801	-	96	86.111	Gambusia_affinis
ENSONIG00000004340	-	99	84.916	ENSGACG00000003831	-	99	84.916	Gasterosteus_aculeatus
ENSONIG00000004340	-	100	98.324	ENSHBUG00000001250	-	100	98.324	Haplochromis_burtoni
ENSONIG00000004340	-	98	85.795	ENSLBEG00000027205	-	99	85.795	Labrus_bergylta
ENSONIG00000004340	-	99	81.461	ENSMAMG00000013955	-	99	81.461	Mastacembelus_armatus
ENSONIG00000004340	-	100	98.324	ENSMZEG00005016277	-	100	98.324	Maylandia_zebra
ENSONIG00000004340	-	100	98.324	ENSMZEG00005016274	-	100	98.324	Maylandia_zebra
ENSONIG00000004340	-	100	80.447	ENSMMOG00000013651	-	99	80.447	Mola_mola
ENSONIG00000004340	-	100	82.123	ENSPLAG00000015887	-	100	82.123	Poecilia_latipinna
ENSONIG00000004340	-	100	82.123	ENSPMEG00000007064	-	100	82.123	Poecilia_mexicana
ENSONIG00000004340	-	96	83.041	ENSPREG00000000912	-	100	83.041	Poecilia_reticulata
ENSONIG00000004340	-	100	69.524	ENSSMAG00000002487	-	100	69.524	Scophthalmus_maximus
ENSONIG00000004340	-	100	82.123	ENSSDUG00000020599	-	100	82.123	Seriola_dumerili
ENSONIG00000004340	-	100	82.682	ENSSLDG00000020097	-	100	82.682	Seriola_lalandi_dorsalis
ENSONIG00000004340	-	100	82.682	ENSSPAG00000017484	-	100	82.682	Stegastes_partitus
ENSONIG00000004340	-	89	74.214	ENSTRUG00000025171	-	98	74.214	Takifugu_rubripes
ENSONIG00000004340	-	87	75.000	ENSTNIG00000000796	-	78	70.056	Tetraodon_nigroviridis
ENSONIG00000004340	-	83	76.510	ENSTNIG00000001632	-	78	70.056	Tetraodon_nigroviridis
ENSONIG00000004340	-	83	74.000	ENSTNIG00000018302	-	78	67.978	Tetraodon_nigroviridis
ENSONIG00000004340	-	63	80.357	ENSTNIG00000005043	-	99	80.357	Tetraodon_nigroviridis
ENSONIG00000004340	-	100	82.123	ENSXMAG00000029601	-	100	82.123	Xiphophorus_maculatus