EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000004574 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7911 bases
Position: chrGL831234.1:227771-235681
Accession: 100691203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005759	TRM13	PF05206.14	8.8e-82	1	1
ENSONIP00000005760	TRM13	PF05206.14	2.7e-80	1	1
ENSONIP00000005759	zf-U11-48K	PF05253.12	2.1e-10	1	1
ENSONIP00000005760	zf-U11-48K	PF05253.12	2.3e-10	1	1
ENSONIP00000005759	zf-TRM13_CCCH	PF11722.8	7.7e-11	1	1
ENSONIP00000005760	zf-TRM13_CCCH	PF11722.8	8.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005764	-	1428	-	ENSONIP00000005760	476 (aa)	-	I3JA70
ENSONIT00000005763	-	1430	-	ENSONIP00000005759	448 (aa)	XP_025758434	I3JA69

Gene Model

Click here to download ENSONIG00000004574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004574	trmt13	99	53.390	ENSG00000122435	TRMT13	96	53.390	Homo_sapiens
ENSONIG00000004574	trmt13	99	73.868	ENSAPOG00000015131	trmt13	99	74.486	Acanthochromis_polyacanthus
ENSONIG00000004574	trmt13	99	54.025	ENSAMEG00000008917	TRMT13	96	54.025	Ailuropoda_melanoleuca
ENSONIG00000004574	trmt13	99	83.007	ENSACIG00000005804	trmt13	93	83.007	Amphilophus_citrinellus
ENSONIG00000004574	trmt13	99	74.074	ENSAOCG00000023585	trmt13	99	74.280	Amphiprion_ocellaris
ENSONIG00000004574	trmt13	99	74.691	ENSAPEG00000004025	trmt13	99	74.897	Amphiprion_percula
ENSONIG00000004574	trmt13	99	75.000	ENSATEG00000006597	trmt13	97	75.000	Anabas_testudineus
ENSONIG00000004574	trmt13	89	55.344	ENSAPLG00000014924	TRMT13	98	55.344	Anas_platyrhynchos
ENSONIG00000004574	trmt13	98	54.409	ENSACAG00000003498	TRMT13	97	54.409	Anolis_carolinensis
ENSONIG00000004574	trmt13	99	53.178	ENSANAG00000019525	TRMT13	96	53.178	Aotus_nancymaae
ENSONIG00000004574	trmt13	100	96.652	ENSACLG00000020018	trmt13	100	96.652	Astatotilapia_calliptera
ENSONIG00000004574	trmt13	99	54.777	ENSAMXG00000017963	trmt13	98	55.839	Astyanax_mexicanus
ENSONIG00000004574	trmt13	99	53.602	ENSBTAG00000015781	TRMT13	98	52.058	Bos_taurus
ENSONIG00000004574	trmt13	99	52.966	ENSCJAG00000000200	TRMT13	89	64.234	Callithrix_jacchus
ENSONIG00000004574	trmt13	65	50.932	ENSCAFG00000020021	TRMT13	94	50.820	Canis_familiaris
ENSONIG00000004574	trmt13	59	59.623	ENSCAFG00020011572	TRMT13	90	59.774	Canis_lupus_dingo
ENSONIG00000004574	trmt13	99	53.797	ENSCHIG00000015395	TRMT13	98	52.075	Capra_hircus
ENSONIG00000004574	trmt13	98	52.452	ENSTSYG00000010811	TRMT13	96	56.701	Carlito_syrichta
ENSONIG00000004574	trmt13	75	40.000	ENSCAPG00000009085	TRMT13	96	42.577	Cavia_aperea
ENSONIG00000004574	trmt13	100	53.178	ENSCPOG00000000694	TRMT13	97	53.178	Cavia_porcellus
ENSONIG00000004574	trmt13	99	52.754	ENSCCAG00000023772	TRMT13	96	52.754	Cebus_capucinus
ENSONIG00000004574	trmt13	99	53.602	ENSCATG00000033556	TRMT13	96	53.602	Cercocebus_atys
ENSONIG00000004574	trmt13	90	53.162	ENSCLAG00000008220	TRMT13	99	53.613	Chinchilla_lanigera
ENSONIG00000004574	trmt13	99	53.602	ENSCSAG00000001506	TRMT13	96	53.602	Chlorocebus_sabaeus
ENSONIG00000004574	trmt13	99	53.830	ENSCPBG00000026671	TRMT13	96	53.830	Chrysemys_picta_bellii
ENSONIG00000004574	trmt13	99	53.390	ENSCANG00000034659	TRMT13	96	53.390	Colobus_angolensis_palliatus
ENSONIG00000004574	trmt13	98	52.991	ENSCGRG00001021601	Trmt13	95	52.991	Cricetulus_griseus_chok1gshd
ENSONIG00000004574	trmt13	50	49.402	ENSCGRG00000000093	-	96	49.402	Cricetulus_griseus_crigri
ENSONIG00000004574	trmt13	99	70.179	ENSCSEG00000000591	trmt13	98	70.404	Cynoglossus_semilaevis
ENSONIG00000004574	trmt13	99	70.996	ENSCVAG00000017342	trmt13	94	70.996	Cyprinodon_variegatus
ENSONIG00000004574	trmt13	99	57.456	ENSDARG00000102846	trmt13	97	57.456	Danio_rerio
ENSONIG00000004574	trmt13	59	58.736	ENSDNOG00000001710	TRMT13	82	58.182	Dasypus_novemcinctus
ENSONIG00000004574	trmt13	99	53.602	ENSDORG00000015808	Trmt13	96	53.602	Dipodomys_ordii
ENSONIG00000004574	trmt13	99	35.294	FBgn0037435	CG18048	95	35.294	Drosophila_melanogaster
ENSONIG00000004574	trmt13	98	47.134	ENSETEG00000005819	TRMT13	96	47.170	Echinops_telfairi
ENSONIG00000004574	trmt13	97	44.866	ENSEBUG00000014444	trmt13	96	44.866	Eptatretus_burgeri
ENSONIG00000004574	trmt13	99	53.814	ENSEASG00005015918	TRMT13	96	53.814	Equus_asinus_asinus
ENSONIG00000004574	trmt13	99	53.602	ENSECAG00000022626	TRMT13	96	53.602	Equus_caballus
ENSONIG00000004574	trmt13	78	58.333	ENSEEUG00000000294	TRMT13	73	58.333	Erinaceus_europaeus
ENSONIG00000004574	trmt13	99	55.814	ENSELUG00000003803	trmt13	98	56.448	Esox_lucius
ENSONIG00000004574	trmt13	99	52.542	ENSFCAG00000030618	TRMT13	100	52.294	Felis_catus
ENSONIG00000004574	trmt13	98	55.459	ENSFALG00000002424	TRMT13	95	55.459	Ficedula_albicollis
ENSONIG00000004574	trmt13	99	53.178	ENSFDAG00000006342	TRMT13	96	53.178	Fukomys_damarensis
ENSONIG00000004574	trmt13	84	72.539	ENSFHEG00000022954	trmt13	100	73.105	Fundulus_heteroclitus
ENSONIG00000004574	trmt13	97	56.422	ENSGMOG00000013223	trmt13	100	56.651	Gadus_morhua
ENSONIG00000004574	trmt13	97	55.044	ENSGALG00000005290	TRMT13	99	53.249	Gallus_gallus
ENSONIG00000004574	trmt13	84	68.421	ENSGAFG00000001577	trmt13	85	67.442	Gambusia_affinis
ENSONIG00000004574	trmt13	99	75.885	ENSGACG00000013428	trmt13	98	76.770	Gasterosteus_aculeatus
ENSONIG00000004574	trmt13	99	53.715	ENSGAGG00000023303	TRMT13	96	60.886	Gopherus_agassizii
ENSONIG00000004574	trmt13	99	53.178	ENSGGOG00000005616	TRMT13	96	53.178	Gorilla_gorilla
ENSONIG00000004574	trmt13	100	97.545	ENSHBUG00000007754	trmt13	100	97.545	Haplochromis_burtoni
ENSONIG00000004574	trmt13	99	52.766	ENSHGLG00000002164	TRMT13	96	52.766	Heterocephalus_glaber_female
ENSONIG00000004574	trmt13	99	52.766	ENSHGLG00100001618	TRMT13	96	52.766	Heterocephalus_glaber_male
ENSONIG00000004574	trmt13	99	57.871	ENSHCOG00000020553	trmt13	99	57.871	Hippocampus_comes
ENSONIG00000004574	trmt13	99	56.769	ENSIPUG00000024787	trmt13	98	57.424	Ictalurus_punctatus
ENSONIG00000004574	trmt13	99	52.542	ENSSTOG00000013483	TRMT13	96	52.542	Ictidomys_tridecemlineatus
ENSONIG00000004574	trmt13	99	52.119	ENSJJAG00000018012	Trmt13	97	52.119	Jaculus_jaculus
ENSONIG00000004574	trmt13	65	71.237	ENSKMAG00000007639	trmt13	88	70.877	Kryptolebias_marmoratus
ENSONIG00000004574	trmt13	99	72.845	ENSLBEG00000020238	trmt13	99	72.845	Labrus_bergylta
ENSONIG00000004574	trmt13	98	55.411	ENSLACG00000013153	TRMT13	99	54.774	Latimeria_chalumnae
ENSONIG00000004574	trmt13	99	56.559	ENSLOCG00000000418	trmt13	98	56.559	Lepisosteus_oculatus
ENSONIG00000004574	trmt13	77	53.908	ENSLAFG00000002383	TRMT13	98	53.908	Loxodonta_africana
ENSONIG00000004574	trmt13	99	53.178	ENSMFAG00000034681	TRMT13	96	53.178	Macaca_fascicularis
ENSONIG00000004574	trmt13	99	53.178	ENSMMUG00000004243	TRMT13	96	53.178	Macaca_mulatta
ENSONIG00000004574	trmt13	99	53.178	ENSMNEG00000036102	TRMT13	96	53.178	Macaca_nemestrina
ENSONIG00000004574	trmt13	99	53.390	ENSMLEG00000034258	TRMT13	96	53.390	Mandrillus_leucophaeus
ENSONIG00000004574	trmt13	98	77.162	ENSMAMG00000016597	trmt13	96	77.162	Mastacembelus_armatus
ENSONIG00000004574	trmt13	100	96.429	ENSMZEG00005020959	trmt13	100	96.429	Maylandia_zebra
ENSONIG00000004574	trmt13	89	55.238	ENSMGAG00000006970	TRMT13	98	55.238	Meleagris_gallopavo
ENSONIG00000004574	trmt13	98	52.866	ENSMAUG00000010448	Trmt13	98	51.125	Mesocricetus_auratus
ENSONIG00000004574	trmt13	99	54.025	ENSMICG00000005283	TRMT13	96	54.025	Microcebus_murinus
ENSONIG00000004574	trmt13	99	54.316	ENSMOCG00000019914	Trmt13	97	54.316	Microtus_ochrogaster
ENSONIG00000004574	trmt13	60	66.292	ENSMMOG00000007762	trmt13	90	66.292	Mola_mola
ENSONIG00000004574	trmt13	100	51.346	ENSMODG00000003646	TRMT13	98	51.346	Monodelphis_domestica
ENSONIG00000004574	trmt13	100	72.467	ENSMALG00000020965	trmt13	98	72.467	Monopterus_albus
ENSONIG00000004574	trmt13	99	53.191	MGP_CAROLIEiJ_G0025568	Trmt13	98	56.831	Mus_caroli
ENSONIG00000004574	trmt13	99	53.376	ENSMUSG00000033439	Trmt13	98	56.831	Mus_musculus
ENSONIG00000004574	trmt13	99	52.954	MGP_PahariEiJ_G0027014	Trmt13	95	56.548	Mus_pahari
ENSONIG00000004574	trmt13	99	53.731	MGP_SPRETEiJ_G0026518	Trmt13	98	56.831	Mus_spretus
ENSONIG00000004574	trmt13	79	53.951	ENSMPUG00000002078	-	97	53.951	Mustela_putorius_furo
ENSONIG00000004574	trmt13	98	53.205	ENSMLUG00000002124	TRMT13	98	51.745	Myotis_lucifugus
ENSONIG00000004574	trmt13	100	90.402	ENSNBRG00000006783	trmt13	98	90.402	Neolamprologus_brichardi
ENSONIG00000004574	trmt13	99	53.178	ENSNLEG00000035917	TRMT13	96	53.178	Nomascus_leucogenys
ENSONIG00000004574	trmt13	53	50.417	ENSMEUG00000013346	-	94	50.622	Notamacropus_eugenii
ENSONIG00000004574	trmt13	59	59.245	ENSOPRG00000012048	TRMT13	57	57.348	Ochotona_princeps
ENSONIG00000004574	trmt13	90	54.147	ENSOANG00000012057	TRMT13	97	54.147	Ornithorhynchus_anatinus
ENSONIG00000004574	trmt13	99	52.766	ENSOCUG00000023095	TRMT13	98	51.255	Oryctolagus_cuniculus
ENSONIG00000004574	trmt13	99	63.853	ENSORLG00000003320	trmt13	99	64.935	Oryzias_latipes
ENSONIG00000004574	trmt13	98	66.962	ENSORLG00020005972	trmt13	97	66.962	Oryzias_latipes_hni
ENSONIG00000004574	trmt13	99	71.179	ENSORLG00015002270	trmt13	99	71.179	Oryzias_latipes_hsok
ENSONIG00000004574	trmt13	99	71.711	ENSOMEG00000006724	trmt13	94	72.368	Oryzias_melastigma
ENSONIG00000004574	trmt13	98	53.846	ENSOGAG00000005618	TRMT13	95	51.935	Otolemur_garnettii
ENSONIG00000004574	trmt13	99	53.797	ENSOARG00000017983	TRMT13	98	52.075	Ovis_aries
ENSONIG00000004574	trmt13	99	53.602	ENSPPAG00000043736	TRMT13	96	53.602	Pan_paniscus
ENSONIG00000004574	trmt13	99	52.542	ENSPPRG00000003424	TRMT13	100	52.294	Panthera_pardus
ENSONIG00000004574	trmt13	99	52.542	ENSPTIG00000018598	TRMT13	100	52.294	Panthera_tigris_altaica
ENSONIG00000004574	trmt13	98	53.433	ENSPTRG00000001001	TRMT13	95	53.433	Pan_troglodytes
ENSONIG00000004574	trmt13	99	53.390	ENSPANG00000007598	TRMT13	96	53.390	Papio_anubis
ENSONIG00000004574	trmt13	99	55.991	ENSPKIG00000001514	trmt13	99	55.991	Paramormyrops_kingsleyae
ENSONIG00000004574	trmt13	89	53.052	ENSPSIG00000012703	TRMT13	99	53.052	Pelodiscus_sinensis
ENSONIG00000004574	trmt13	99	62.914	ENSPMGG00000013298	trmt13	94	62.914	Periophthalmus_magnuspinnatus
ENSONIG00000004574	trmt13	98	53.648	ENSPEMG00000000275	Trmt13	98	51.235	Peromyscus_maniculatus_bairdii
ENSONIG00000004574	trmt13	98	48.117	ENSPMAG00000000823	trmt13	100	47.239	Petromyzon_marinus
ENSONIG00000004574	trmt13	98	53.404	ENSPCIG00000007699	TRMT13	97	53.404	Phascolarctos_cinereus
ENSONIG00000004574	trmt13	97	68.090	ENSPFOG00000008675	trmt13	94	68.090	Poecilia_formosa
ENSONIG00000004574	trmt13	99	67.834	ENSPLAG00000009709	trmt13	99	67.834	Poecilia_latipinna
ENSONIG00000004574	trmt13	98	67.763	ENSPMEG00000022954	trmt13	99	67.763	Poecilia_mexicana
ENSONIG00000004574	trmt13	86	69.054	ENSPREG00000005645	trmt13	95	66.551	Poecilia_reticulata
ENSONIG00000004574	trmt13	99	53.305	ENSPPYG00000001120	TRMT13	95	53.305	Pongo_abelii
ENSONIG00000004574	trmt13	99	52.654	ENSPCAG00000002340	TRMT13	96	52.654	Procavia_capensis
ENSONIG00000004574	trmt13	99	53.178	ENSPCOG00000017984	TRMT13	100	51.376	Propithecus_coquereli
ENSONIG00000004574	trmt13	99	53.178	ENSPVAG00000017430	TRMT13	96	53.178	Pteropus_vampyrus
ENSONIG00000004574	trmt13	100	93.304	ENSPNYG00000013690	trmt13	100	93.304	Pundamilia_nyererei
ENSONIG00000004574	trmt13	99	54.545	ENSPNAG00000022130	trmt13	98	54.545	Pygocentrus_nattereri
ENSONIG00000004574	trmt13	98	53.433	ENSRNOG00000015140	Trmt13	95	52.058	Rattus_norvegicus
ENSONIG00000004574	trmt13	99	53.390	ENSRBIG00000037686	TRMT13	96	53.390	Rhinopithecus_bieti
ENSONIG00000004574	trmt13	99	53.390	ENSRROG00000044057	TRMT13	96	53.390	Rhinopithecus_roxellana
ENSONIG00000004574	trmt13	99	53.390	ENSSBOG00000026541	TRMT13	96	53.390	Saimiri_boliviensis_boliviensis
ENSONIG00000004574	trmt13	92	52.941	ENSSHAG00000005213	TRMT13	97	52.941	Sarcophilus_harrisii
ENSONIG00000004574	trmt13	99	57.112	ENSSFOG00015017560	trmt13	98	57.543	Scleropages_formosus
ENSONIG00000004574	trmt13	99	71.895	ENSSMAG00000014592	trmt13	96	71.895	Scophthalmus_maximus
ENSONIG00000004574	trmt13	99	75.431	ENSSDUG00000015508	trmt13	97	74.894	Seriola_dumerili
ENSONIG00000004574	trmt13	100	74.630	ENSSLDG00000019060	trmt13	97	74.630	Seriola_lalandi_dorsalis
ENSONIG00000004574	trmt13	100	47.917	ENSSARG00000010344	TRMT13	99	47.917	Sorex_araneus
ENSONIG00000004574	trmt13	98	51.592	ENSSPUG00000016339	TRMT13	99	51.592	Sphenodon_punctatus
ENSONIG00000004574	trmt13	99	79.075	ENSSPAG00000011922	trmt13	99	78.478	Stegastes_partitus
ENSONIG00000004574	trmt13	99	54.123	ENSSSCG00000006869	TRMT13	96	54.123	Sus_scrofa
ENSONIG00000004574	trmt13	99	55.508	ENSTGUG00000005253	TRMT13	98	55.508	Taeniopygia_guttata
ENSONIG00000004574	trmt13	98	68.845	ENSTRUG00000008400	trmt13	97	68.845	Takifugu_rubripes
ENSONIG00000004574	trmt13	88	42.446	ENSTBEG00000008911	TRMT13	99	42.446	Tupaia_belangeri
ENSONIG00000004574	trmt13	98	52.043	ENSUAMG00000017251	TRMT13	98	49.287	Ursus_americanus
ENSONIG00000004574	trmt13	99	54.237	ENSUMAG00000007901	TRMT13	99	54.670	Ursus_maritimus
ENSONIG00000004574	trmt13	90	42.056	ENSVPAG00000001034	TRMT13	84	66.667	Vicugna_pacos
ENSONIG00000004574	trmt13	99	53.474	ENSVVUG00000021996	TRMT13	97	53.474	Vulpes_vulpes
ENSONIG00000004574	trmt13	99	51.528	ENSXETG00000013204	trmt13	97	51.528	Xenopus_tropicalis
ENSONIG00000004574	trmt13	99	66.958	ENSXMAG00000010765	trmt13	99	66.958	Xiphophorus_maculatus