EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004715 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5270 bases
Position: chrGL831438.1:353407-358676
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005938	RRM_1	PF00076.22	4e-25	1	2
ENSONIP00000005938	RRM_1	PF00076.22	4e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005942	-	759	-	ENSONIP00000005938	253 (aa)	-	I3JAP8

Gene Model

Click here to download ENSONIG00000004715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004715	trnau1apa	97	47.984	ENSONIG00000016639	trnau1apb	82	47.984
ENSONIG00000004715	trnau1apa	74	30.719	ENSONIG00000008176	pabpc4	53	30.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004715	trnau1apa	95	59.917	ENSG00000180098	TRNAU1AP	80	59.671	Homo_sapiens
ENSONIG00000004715	trnau1apa	97	90.323	ENSAPOG00000007148	TRNAU1AP	82	90.574	Acanthochromis_polyacanthus
ENSONIG00000004715	trnau1apa	95	60.331	ENSAMEG00000011367	TRNAU1AP	80	60.082	Ailuropoda_melanoleuca
ENSONIG00000004715	trnau1apa	97	93.061	ENSACIG00000004161	trnau1apa	80	93.061	Amphilophus_citrinellus
ENSONIG00000004715	trnau1apa	97	92.683	ENSAOCG00000008056	trnau1apa	80	92.683	Amphiprion_ocellaris
ENSONIG00000004715	trnau1apa	97	92.683	ENSAPEG00000008868	trnau1apa	80	92.683	Amphiprion_percula
ENSONIG00000004715	trnau1apa	95	85.657	ENSATEG00000012140	trnau1apa	80	85.259	Anabas_testudineus
ENSONIG00000004715	trnau1apa	96	60.163	ENSAPLG00000002606	TRNAU1AP	84	58.800	Anas_platyrhynchos
ENSONIG00000004715	trnau1apa	95	49.593	ENSACAG00000003995	-	80	48.594	Anolis_carolinensis
ENSONIG00000004715	trnau1apa	95	59.917	ENSANAG00000018976	TRNAU1AP	80	59.671	Aotus_nancymaae
ENSONIG00000004715	trnau1apa	97	99.184	ENSACLG00000018515	trnau1apa	81	99.184	Astatotilapia_calliptera
ENSONIG00000004715	trnau1apa	82	58.654	ENSAMXG00000013750	trnau1apa	58	65.537	Astyanax_mexicanus
ENSONIG00000004715	trnau1apa	95	70.000	ENSAMXG00000029240	-	79	70.000	Astyanax_mexicanus
ENSONIG00000004715	trnau1apa	95	59.504	ENSBTAG00000010393	TRNAU1AP	80	59.259	Bos_taurus
ENSONIG00000004715	trnau1apa	95	59.917	ENSCJAG00000009717	TRNAU1AP	79	71.212	Callithrix_jacchus
ENSONIG00000004715	trnau1apa	95	59.917	ENSCAFG00000011735	TRNAU1AP	80	59.671	Canis_familiaris
ENSONIG00000004715	trnau1apa	95	59.917	ENSCAFG00020023584	TRNAU1AP	80	59.671	Canis_lupus_dingo
ENSONIG00000004715	trnau1apa	95	59.504	ENSCHIG00000023215	TRNAU1AP	80	59.259	Capra_hircus
ENSONIG00000004715	trnau1apa	95	59.917	ENSTSYG00000003506	TRNAU1AP	79	71.212	Carlito_syrichta
ENSONIG00000004715	trnau1apa	95	59.917	ENSCPOG00000001925	TRNAU1AP	80	59.671	Cavia_porcellus
ENSONIG00000004715	trnau1apa	95	59.917	ENSCCAG00000037506	TRNAU1AP	79	71.212	Cebus_capucinus
ENSONIG00000004715	trnau1apa	95	59.917	ENSCATG00000044617	TRNAU1AP	79	71.212	Cercocebus_atys
ENSONIG00000004715	trnau1apa	95	59.917	ENSCLAG00000008223	TRNAU1AP	80	59.036	Chinchilla_lanigera
ENSONIG00000004715	trnau1apa	95	59.917	ENSCSAG00000001014	TRNAU1AP	80	59.671	Chlorocebus_sabaeus
ENSONIG00000004715	trnau1apa	94	60.166	ENSCPBG00000000121	TRNAU1AP	82	59.504	Chrysemys_picta_bellii
ENSONIG00000004715	trnau1apa	63	49.375	ENSCSAVG00000011781	-	84	49.375	Ciona_savignyi
ENSONIG00000004715	trnau1apa	95	49.587	ENSCANG00000041949	TRNAU1AP	77	49.383	Colobus_angolensis_palliatus
ENSONIG00000004715	trnau1apa	95	59.917	ENSCGRG00001004713	Trnau1ap	80	59.671	Cricetulus_griseus_chok1gshd
ENSONIG00000004715	trnau1apa	95	59.917	ENSCGRG00000014532	Trnau1ap	80	59.671	Cricetulus_griseus_crigri
ENSONIG00000004715	trnau1apa	97	77.291	ENSCSEG00000006663	trnau1apa	80	77.689	Cynoglossus_semilaevis
ENSONIG00000004715	trnau1apa	92	85.532	ENSCVAG00000018069	trnau1apa	80	85.425	Cyprinodon_variegatus
ENSONIG00000004715	trnau1apa	97	52.632	ENSDARG00000101323	trnau1apa	57	62.431	Danio_rerio
ENSONIG00000004715	trnau1apa	95	59.917	ENSDNOG00000033009	TRNAU1AP	80	59.671	Dasypus_novemcinctus
ENSONIG00000004715	trnau1apa	70	58.427	ENSDNOG00000047959	-	92	58.427	Dasypus_novemcinctus
ENSONIG00000004715	trnau1apa	97	58.704	ENSDORG00000006349	Trnau1ap	94	60.169	Dipodomys_ordii
ENSONIG00000004715	trnau1apa	76	60.622	ENSETEG00000012594	TRNAU1AP	74	60.309	Echinops_telfairi
ENSONIG00000004715	trnau1apa	51	43.333	ENSEBUG00000004709	-	79	43.333	Eptatretus_burgeri
ENSONIG00000004715	trnau1apa	71	46.250	ENSEBUG00000006349	-	63	46.250	Eptatretus_burgeri
ENSONIG00000004715	trnau1apa	95	59.917	ENSEASG00005010062	TRNAU1AP	81	71.212	Equus_asinus_asinus
ENSONIG00000004715	trnau1apa	95	59.917	ENSECAG00000012980	TRNAU1AP	81	71.212	Equus_caballus
ENSONIG00000004715	trnau1apa	96	80.247	ENSELUG00000022790	-	77	81.250	Esox_lucius
ENSONIG00000004715	trnau1apa	97	73.387	ENSELUG00000017686	trnau1apa	82	75.918	Esox_lucius
ENSONIG00000004715	trnau1apa	95	59.917	ENSFCAG00000013401	TRNAU1AP	80	59.671	Felis_catus
ENSONIG00000004715	trnau1apa	94	58.921	ENSFALG00000001371	TRNAU1AP	82	59.091	Ficedula_albicollis
ENSONIG00000004715	trnau1apa	95	59.917	ENSFDAG00000018599	TRNAU1AP	80	59.671	Fukomys_damarensis
ENSONIG00000004715	trnau1apa	91	86.920	ENSFHEG00000018232	trnau1apa	85	86.122	Fundulus_heteroclitus
ENSONIG00000004715	trnau1apa	83	69.907	ENSGMOG00000016508	trnau1apa	79	67.611	Gadus_morhua
ENSONIG00000004715	trnau1apa	95	58.776	ENSGALG00000001310	-	88	59.350	Gallus_gallus
ENSONIG00000004715	trnau1apa	93	88.186	ENSGAFG00000004928	trnau1apa	94	88.259	Gambusia_affinis
ENSONIG00000004715	trnau1apa	97	88.163	ENSGACG00000001443	trnau1apa	80	88.163	Gasterosteus_aculeatus
ENSONIG00000004715	trnau1apa	94	60.166	ENSGAGG00000004940	TRNAU1AP	82	59.504	Gopherus_agassizii
ENSONIG00000004715	trnau1apa	95	59.917	ENSGGOG00000003511	TRNAU1AP	79	71.212	Gorilla_gorilla
ENSONIG00000004715	trnau1apa	97	97.200	ENSHBUG00000002510	trnau1apa	81	97.200	Haplochromis_burtoni
ENSONIG00000004715	trnau1apa	95	59.917	ENSHGLG00000010380	TRNAU1AP	80	59.671	Heterocephalus_glaber_female
ENSONIG00000004715	trnau1apa	97	57.317	ENSHGLG00100012699	TRNAU1AP	78	59.149	Heterocephalus_glaber_male
ENSONIG00000004715	trnau1apa	97	76.892	ENSHCOG00000014770	trnau1apa	80	74.502	Hippocampus_comes
ENSONIG00000004715	trnau1apa	95	59.917	ENSSTOG00000000079	TRNAU1AP	80	59.671	Ictidomys_tridecemlineatus
ENSONIG00000004715	trnau1apa	96	60.082	ENSJJAG00000010128	Trnau1ap	80	59.756	Jaculus_jaculus
ENSONIG00000004715	trnau1apa	97	84.615	ENSKMAG00000001230	trnau1apa	80	86.235	Kryptolebias_marmoratus
ENSONIG00000004715	trnau1apa	97	81.569	ENSLBEG00000011683	trnau1apa	81	82.812	Labrus_bergylta
ENSONIG00000004715	trnau1apa	95	50.413	ENSLACG00000005541	TRNAU1AP	80	48.971	Latimeria_chalumnae
ENSONIG00000004715	trnau1apa	90	61.905	ENSLOCG00000004041	trnau1apa	81	58.197	Lepisosteus_oculatus
ENSONIG00000004715	trnau1apa	95	60.331	ENSLAFG00000007628	TRNAU1AP	80	60.082	Loxodonta_africana
ENSONIG00000004715	trnau1apa	95	59.917	ENSMFAG00000043751	TRNAU1AP	79	71.212	Macaca_fascicularis
ENSONIG00000004715	trnau1apa	95	59.917	ENSMMUG00000006561	TRNAU1AP	80	59.671	Macaca_mulatta
ENSONIG00000004715	trnau1apa	95	59.917	ENSMNEG00000044201	TRNAU1AP	79	71.212	Macaca_nemestrina
ENSONIG00000004715	trnau1apa	95	59.917	ENSMLEG00000015649	TRNAU1AP	79	71.212	Mandrillus_leucophaeus
ENSONIG00000004715	trnau1apa	97	86.508	ENSMAMG00000001247	trnau1apa	81	86.111	Mastacembelus_armatus
ENSONIG00000004715	trnau1apa	97	99.184	ENSMZEG00005017722	trnau1apa	81	99.184	Maylandia_zebra
ENSONIG00000004715	trnau1apa	95	59.504	ENSMGAG00000002105	TRNAU1AP	83	59.259	Meleagris_gallopavo
ENSONIG00000004715	trnau1apa	95	59.917	ENSMICG00000008386	TRNAU1AP	79	71.212	Microcebus_murinus
ENSONIG00000004715	trnau1apa	95	59.917	ENSMOCG00000011189	Trnau1ap	80	59.671	Microtus_ochrogaster
ENSONIG00000004715	trnau1apa	92	74.684	ENSMMOG00000012107	trnau1apa	76	74.684	Mola_mola
ENSONIG00000004715	trnau1apa	95	59.592	ENSMODG00000010927	TRNAU1AP	80	58.635	Monodelphis_domestica
ENSONIG00000004715	trnau1apa	97	87.200	ENSMALG00000016778	trnau1apa	80	87.200	Monopterus_albus
ENSONIG00000004715	trnau1apa	88	71.250	MGP_CAROLIEiJ_G0026563	Trnau1ap	96	57.273	Mus_caroli
ENSONIG00000004715	trnau1apa	88	71.250	ENSMUSG00000028898	Trnau1ap	96	57.273	Mus_musculus
ENSONIG00000004715	trnau1apa	88	71.250	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSONIG00000004715	trnau1apa	88	71.250	MGP_SPRETEiJ_G0027544	Trnau1ap	96	57.273	Mus_spretus
ENSONIG00000004715	trnau1apa	95	59.917	ENSMPUG00000015511	TRNAU1AP	80	59.671	Mustela_putorius_furo
ENSONIG00000004715	trnau1apa	95	59.917	ENSMLUG00000012586	TRNAU1AP	80	59.671	Myotis_lucifugus
ENSONIG00000004715	trnau1apa	95	60.744	ENSNGAG00000015881	Trnau1ap	80	59.036	Nannospalax_galili
ENSONIG00000004715	trnau1apa	98	82.591	ENSNBRG00000001758	trnau1apa	79	82.591	Neolamprologus_brichardi
ENSONIG00000004715	trnau1apa	95	59.917	ENSNLEG00000009822	TRNAU1AP	79	71.212	Nomascus_leucogenys
ENSONIG00000004715	trnau1apa	95	59.091	ENSMEUG00000006117	TRNAU1AP	83	58.848	Notamacropus_eugenii
ENSONIG00000004715	trnau1apa	95	59.917	ENSODEG00000002970	TRNAU1AP	80	59.671	Octodon_degus
ENSONIG00000004715	trnau1apa	96	44.355	ENSOANG00000005325	-	80	42.857	Ornithorhynchus_anatinus
ENSONIG00000004715	trnau1apa	95	48.347	ENSOCUG00000006834	-	89	47.934	Oryctolagus_cuniculus
ENSONIG00000004715	trnau1apa	64	67.073	ENSOCUG00000002353	-	58	67.073	Oryctolagus_cuniculus
ENSONIG00000004715	trnau1apa	95	58.264	ENSOCUG00000011704	-	80	58.025	Oryctolagus_cuniculus
ENSONIG00000004715	trnau1apa	91	87.013	ENSORLG00000010428	trnau1apa	80	85.772	Oryzias_latipes
ENSONIG00000004715	trnau1apa	91	87.013	ENSORLG00020000926	trnau1ap	80	85.772	Oryzias_latipes_hni
ENSONIG00000004715	trnau1apa	91	87.013	ENSORLG00015009858	trnau1ap	80	85.772	Oryzias_latipes_hsok
ENSONIG00000004715	trnau1apa	91	87.069	ENSOMEG00000007873	trnau1apa	80	85.772	Oryzias_melastigma
ENSONIG00000004715	trnau1apa	95	59.917	ENSOGAG00000002274	TRNAU1AP	80	59.671	Otolemur_garnettii
ENSONIG00000004715	trnau1apa	95	59.504	ENSOARG00000002843	TRNAU1AP	80	59.259	Ovis_aries
ENSONIG00000004715	trnau1apa	95	59.917	ENSPPAG00000033927	TRNAU1AP	79	71.212	Pan_paniscus
ENSONIG00000004715	trnau1apa	95	59.917	ENSPPRG00000004416	TRNAU1AP	80	59.671	Panthera_pardus
ENSONIG00000004715	trnau1apa	95	59.917	ENSPTIG00000016677	TRNAU1AP	80	59.671	Panthera_tigris_altaica
ENSONIG00000004715	trnau1apa	60	71.711	ENSPTRG00000000434	-	61	70.253	Pan_troglodytes
ENSONIG00000004715	trnau1apa	95	59.917	ENSPANG00000016019	TRNAU1AP	79	71.212	Papio_anubis
ENSONIG00000004715	trnau1apa	95	81.250	ENSPKIG00000022205	-	78	81.250	Paramormyrops_kingsleyae
ENSONIG00000004715	trnau1apa	95	57.851	ENSPKIG00000015511	trnau1apa	79	57.851	Paramormyrops_kingsleyae
ENSONIG00000004715	trnau1apa	94	60.581	ENSPSIG00000006864	TRNAU1AP	82	58.776	Pelodiscus_sinensis
ENSONIG00000004715	trnau1apa	94	75.417	ENSPMGG00000023893	trnau1apa	77	73.529	Periophthalmus_magnuspinnatus
ENSONIG00000004715	trnau1apa	95	59.504	ENSPEMG00000007877	Trnau1ap	80	59.259	Peromyscus_maniculatus_bairdii
ENSONIG00000004715	trnau1apa	90	50.655	ENSPMAG00000005934	trnau1apa	97	49.123	Petromyzon_marinus
ENSONIG00000004715	trnau1apa	65	54.762	ENSPMAG00000000592	trnau1apa	92	54.762	Petromyzon_marinus
ENSONIG00000004715	trnau1apa	97	86.235	ENSPFOG00000008100	trnau1apa	80	87.854	Poecilia_formosa
ENSONIG00000004715	trnau1apa	95	86.008	ENSPLAG00000010236	trnau1apa	82	87.654	Poecilia_latipinna
ENSONIG00000004715	trnau1apa	98	85.200	ENSPMEG00000016387	trnau1apa	79	87.149	Poecilia_mexicana
ENSONIG00000004715	trnau1apa	81	90.698	ENSPREG00000019821	trnau1apa	67	90.698	Poecilia_reticulata
ENSONIG00000004715	trnau1apa	87	50.000	ENSPPYG00000001639	-	81	49.776	Pongo_abelii
ENSONIG00000004715	trnau1apa	96	60.082	ENSPCOG00000027712	-	80	59.671	Propithecus_coquereli
ENSONIG00000004715	trnau1apa	51	69.767	ENSPCOG00000023470	-	79	47.934	Propithecus_coquereli
ENSONIG00000004715	trnau1apa	95	59.917	ENSPVAG00000017214	TRNAU1AP	80	59.671	Pteropus_vampyrus
ENSONIG00000004715	trnau1apa	97	97.200	ENSPNYG00000010130	trnau1apa	97	97.200	Pundamilia_nyererei
ENSONIG00000004715	trnau1apa	97	52.653	ENSPNAG00000024905	trnau1apa	77	52.653	Pygocentrus_nattereri
ENSONIG00000004715	trnau1apa	95	59.917	ENSRNOG00000055344	Trnau1ap	78	59.036	Rattus_norvegicus
ENSONIG00000004715	trnau1apa	95	59.917	ENSRBIG00000029083	TRNAU1AP	79	71.212	Rhinopithecus_bieti
ENSONIG00000004715	trnau1apa	95	59.917	ENSRROG00000029128	TRNAU1AP	79	71.212	Rhinopithecus_roxellana
ENSONIG00000004715	trnau1apa	95	59.917	ENSSBOG00000021299	TRNAU1AP	79	71.212	Saimiri_boliviensis_boliviensis
ENSONIG00000004715	trnau1apa	95	59.592	ENSSHAG00000008108	TRNAU1AP	80	58.635	Sarcophilus_harrisii
ENSONIG00000004715	trnau1apa	97	82.800	ENSSMAG00000020851	trnau1apa	80	84.400	Scophthalmus_maximus
ENSONIG00000004715	trnau1apa	97	85.657	ENSSDUG00000011734	trnau1apa	80	85.657	Seriola_dumerili
ENSONIG00000004715	trnau1apa	93	70.213	ENSSLDG00000012101	trnau1apa	74	70.213	Seriola_lalandi_dorsalis
ENSONIG00000004715	trnau1apa	95	59.917	ENSSARG00000007536	TRNAU1AP	83	59.671	Sorex_araneus
ENSONIG00000004715	trnau1apa	95	56.612	ENSSPUG00000010400	-	80	55.422	Sphenodon_punctatus
ENSONIG00000004715	trnau1apa	56	51.773	ENSSPUG00000010415	-	73	47.973	Sphenodon_punctatus
ENSONIG00000004715	trnau1apa	97	89.879	ENSSPAG00000005029	trnau1apa	80	89.879	Stegastes_partitus
ENSONIG00000004715	trnau1apa	98	59.677	ENSSSCG00000030284	TRNAU1AP	80	59.671	Sus_scrofa
ENSONIG00000004715	trnau1apa	95	60.408	ENSTGUG00000000735	-	83	59.756	Taeniopygia_guttata
ENSONIG00000004715	trnau1apa	97	85.366	ENSTRUG00000003352	trnau1apa	80	82.927	Takifugu_rubripes
ENSONIG00000004715	trnau1apa	97	79.839	ENSTNIG00000006129	trnau1apa	80	79.839	Tetraodon_nigroviridis
ENSONIG00000004715	trnau1apa	81	52.632	ENSTBEG00000008049	-	79	52.174	Tupaia_belangeri
ENSONIG00000004715	trnau1apa	95	59.917	ENSTTRG00000001854	TRNAU1AP	80	59.671	Tursiops_truncatus
ENSONIG00000004715	trnau1apa	94	59.664	ENSUAMG00000008789	TRNAU1AP	82	59.414	Ursus_americanus
ENSONIG00000004715	trnau1apa	95	59.917	ENSUMAG00000011068	TRNAU1AP	80	59.036	Ursus_maritimus
ENSONIG00000004715	trnau1apa	81	59.223	ENSVPAG00000006778	TRNAU1AP	67	58.937	Vicugna_pacos
ENSONIG00000004715	trnau1apa	96	60.082	ENSVVUG00000012518	TRNAU1AP	74	60.870	Vulpes_vulpes
ENSONIG00000004715	trnau1apa	93	88.186	ENSXMAG00000017361	trnau1apa	80	88.259	Xiphophorus_maculatus