EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004734 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 21644 bases
Position: chrGL831438.1:419988-441631
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000005961	tRNA-synt_1g	PF09334.11	1.7e-05	1	1
ENSONIP00000005961	Anticodon_1	PF08264.13	6.1e-36	1	1
ENSONIP00000005961	tRNA-synt_1	PF00133.22	1e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000005965	-	3000	-	ENSONIP00000005961	1000 (aa)	-	I3JAS1

Gene Model

Click here to download ENSONIG00000004734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004734	vars2	69	57.069	ENSONIG00000013064	vars	59	57.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004734	vars2	100	59.670	ENSAPOG00000007396	vars2	93	59.651	Acanthochromis_polyacanthus
ENSONIG00000004734	vars2	97	38.335	ENSAMEG00000012997	VARS2	90	38.335	Ailuropoda_melanoleuca
ENSONIG00000004734	vars2	100	63.725	ENSACIG00000004344	vars2	95	63.689	Amphilophus_citrinellus
ENSONIG00000004734	vars2	100	60.370	ENSAOCG00000000476	vars2	93	60.370	Amphiprion_ocellaris
ENSONIG00000004734	vars2	100	60.370	ENSAPEG00000008646	vars2	91	60.370	Amphiprion_percula
ENSONIG00000004734	vars2	100	60.942	ENSATEG00000012291	vars2	93	60.942	Anabas_testudineus
ENSONIG00000004734	vars2	99	39.210	ENSACAG00000022093	VARS2	91	38.996	Anolis_carolinensis
ENSONIG00000004734	vars2	74	56.075	ENSANAG00000038018	VARS2	92	36.929	Aotus_nancymaae
ENSONIG00000004734	vars2	100	71.415	ENSACLG00000018673	vars2	94	71.415	Astatotilapia_calliptera
ENSONIG00000004734	vars2	100	52.153	ENSAMXG00000017773	vars2	93	52.153	Astyanax_mexicanus
ENSONIG00000004734	vars2	99	38.536	ENSBTAG00000010698	VARS2	92	38.573	Bos_taurus
ENSONIG00000004734	vars2	99	36.954	ENSCJAG00000019826	VARS2	92	36.735	Callithrix_jacchus
ENSONIG00000004734	vars2	98	38.319	ENSCAFG00000000454	VARS2	92	38.416	Canis_familiaris
ENSONIG00000004734	vars2	86	41.263	ENSCAFG00020019387	VARS2	87	41.309	Canis_lupus_dingo
ENSONIG00000004734	vars2	98	38.588	ENSCHIG00000007847	VARS2	92	38.610	Capra_hircus
ENSONIG00000004734	vars2	98	38.357	ENSTSYG00000009904	VARS2	93	38.357	Carlito_syrichta
ENSONIG00000004734	vars2	94	37.410	ENSCAPG00000017770	VARS2	99	37.193	Cavia_aperea
ENSONIG00000004734	vars2	99	38.290	ENSCPOG00000021834	VARS2	92	38.387	Cavia_porcellus
ENSONIG00000004734	vars2	99	37.148	ENSCCAG00000037907	VARS2	92	37.026	Cebus_capucinus
ENSONIG00000004734	vars2	98	37.524	ENSCATG00000032554	VARS2	93	37.621	Cercocebus_atys
ENSONIG00000004734	vars2	71	59.902	ENSCLAG00000002889	VARS2	93	38.207	Chinchilla_lanigera
ENSONIG00000004734	vars2	98	37.814	ENSCSAG00000008327	VARS2	93	37.911	Chlorocebus_sabaeus
ENSONIG00000004734	vars2	98	40.299	ENSCPBG00000021502	VARS2	96	38.567	Chrysemys_picta_bellii
ENSONIG00000004734	vars2	98	37.524	ENSCANG00000014991	VARS2	92	37.621	Colobus_angolensis_palliatus
ENSONIG00000004734	vars2	99	37.741	ENSCGRG00001021535	Vars2	67	56.208	Cricetulus_griseus_chok1gshd
ENSONIG00000004734	vars2	99	37.741	ENSCGRG00000014112	Vars2	67	56.208	Cricetulus_griseus_crigri
ENSONIG00000004734	vars2	66	82.597	ENSCSEG00000015432	vars2	72	82.597	Cynoglossus_semilaevis
ENSONIG00000004734	vars2	70	49.231	ENSCVAG00000017765	vars2	98	49.231	Cyprinodon_variegatus
ENSONIG00000004734	vars2	100	52.981	ENSDARG00000056717	vars2	94	52.981	Danio_rerio
ENSONIG00000004734	vars2	57	56.923	ENSDORG00000008516	Vars2	92	33.485	Dipodomys_ordii
ENSONIG00000004734	vars2	65	57.602	ENSETEG00000014844	VARS2	59	57.602	Echinops_telfairi
ENSONIG00000004734	vars2	98	38.387	ENSEASG00005019997	VARS2	95	40.989	Equus_asinus_asinus
ENSONIG00000004734	vars2	98	38.688	ENSECAG00000018202	VARS2	93	38.536	Equus_caballus
ENSONIG00000004734	vars2	99	52.770	ENSELUG00000017824	vars2	93	52.770	Esox_lucius
ENSONIG00000004734	vars2	98	37.537	ENSFCAG00000010531	VARS2	93	37.098	Felis_catus
ENSONIG00000004734	vars2	99	37.938	ENSFDAG00000017216	VARS2	92	38.035	Fukomys_damarensis
ENSONIG00000004734	vars2	58	81.841	ENSFHEG00000013932	vars2	60	81.841	Fundulus_heteroclitus
ENSONIG00000004734	vars2	97	52.573	ENSGMOG00000018960	vars2	99	52.716	Gadus_morhua
ENSONIG00000004734	vars2	90	50.595	ENSGAFG00000004737	vars2	92	50.595	Gambusia_affinis
ENSONIG00000004734	vars2	99	55.902	ENSGACG00000001464	vars2	99	55.902	Gasterosteus_aculeatus
ENSONIG00000004734	vars2	69	64.800	ENSGAGG00000011652	VARS2	67	64.800	Gopherus_agassizii
ENSONIG00000004734	vars2	98	37.427	ENSGGOG00000014587	VARS2	93	37.524	Gorilla_gorilla
ENSONIG00000004734	vars2	98	69.539	ENSHBUG00000002448	vars2	95	69.539	Haplochromis_burtoni
ENSONIG00000004734	vars2	72	58.924	ENSHGLG00000012886	VARS2	63	58.924	Heterocephalus_glaber_female
ENSONIG00000004734	vars2	72	58.680	ENSHGLG00100016535	VARS2	65	58.680	Heterocephalus_glaber_male
ENSONIG00000004734	vars2	73	48.725	ENSHCOG00000017907	vars2	97	48.725	Hippocampus_comes
ENSONIG00000004734	vars2	100	52.432	ENSIPUG00000015573	Vars2	93	52.432	Ictalurus_punctatus
ENSONIG00000004734	vars2	74	55.607	ENSSTOG00000009924	VARS2	92	36.893	Ictidomys_tridecemlineatus
ENSONIG00000004734	vars2	99	37.646	ENSJJAG00000011144	Vars2	92	37.646	Jaculus_jaculus
ENSONIG00000004734	vars2	100	57.936	ENSKMAG00000001393	vars2	93	57.936	Kryptolebias_marmoratus
ENSONIG00000004734	vars2	98	56.859	ENSLBEG00000011949	vars2	92	56.816	Labrus_bergylta
ENSONIG00000004734	vars2	70	52.357	ENSLACG00000001576	-	67	52.840	Latimeria_chalumnae
ENSONIG00000004734	vars2	74	56.410	ENSLAFG00000015183	VARS2	92	36.919	Loxodonta_africana
ENSONIG00000004734	vars2	98	37.911	ENSMFAG00000042367	VARS2	93	38.008	Macaca_fascicularis
ENSONIG00000004734	vars2	98	38.008	ENSMMUG00000018609	VARS2	93	38.104	Macaca_mulatta
ENSONIG00000004734	vars2	98	38.215	ENSMNEG00000043163	VARS2	93	38.201	Macaca_nemestrina
ENSONIG00000004734	vars2	98	37.621	ENSMLEG00000041728	VARS2	90	37.718	Mandrillus_leucophaeus
ENSONIG00000004734	vars2	100	59.806	ENSMAMG00000020339	vars2	65	84.399	Mastacembelus_armatus
ENSONIG00000004734	vars2	100	71.316	ENSMZEG00005017669	vars2	94	71.316	Maylandia_zebra
ENSONIG00000004734	vars2	99	38.247	ENSMAUG00000018946	Vars2	65	59.658	Mesocricetus_auratus
ENSONIG00000004734	vars2	71	47.069	ENSMICG00000005365	VARS2	92	40.396	Microcebus_murinus
ENSONIG00000004734	vars2	92	41.085	ENSMOCG00000014607	Vars2	91	40.816	Microtus_ochrogaster
ENSONIG00000004734	vars2	100	55.771	ENSMMOG00000012122	vars2	94	55.760	Mola_mola
ENSONIG00000004734	vars2	96	37.209	ENSMODG00000015848	VARS2	91	36.857	Monodelphis_domestica
ENSONIG00000004734	vars2	100	58.366	ENSMALG00000009217	vars2	99	58.366	Monopterus_albus
ENSONIG00000004734	vars2	72	58.924	MGP_CAROLIEiJ_G0021529	Vars2	65	58.924	Mus_caroli
ENSONIG00000004734	vars2	75	56.264	ENSMUSG00000038838	Vars2	67	56.264	Mus_musculus
ENSONIG00000004734	vars2	73	56.492	MGP_PahariEiJ_G0020523	Vars2	66	59.169	Mus_pahari
ENSONIG00000004734	vars2	72	58.924	MGP_SPRETEiJ_G0022436	Vars2	67	56.264	Mus_spretus
ENSONIG00000004734	vars2	98	38.566	ENSMPUG00000011643	VARS2	92	38.566	Mustela_putorius_furo
ENSONIG00000004734	vars2	95	38.632	ENSMLUG00000002356	VARS2	85	38.632	Myotis_lucifugus
ENSONIG00000004734	vars2	98	34.018	ENSNGAG00000020607	Vars2	91	33.920	Nannospalax_galili
ENSONIG00000004734	vars2	70	82.133	ENSNBRG00000001624	vars2	59	82.133	Neolamprologus_brichardi
ENSONIG00000004734	vars2	98	36.533	ENSNLEG00000005625	VARS2	90	36.631	Nomascus_leucogenys
ENSONIG00000004734	vars2	60	58.631	ENSMEUG00000014475	VARS2	61	58.631	Notamacropus_eugenii
ENSONIG00000004734	vars2	63	62.667	ENSOPRG00000000682	VARS2	57	62.667	Ochotona_princeps
ENSONIG00000004734	vars2	99	37.791	ENSODEG00000017965	VARS2	92	37.694	Octodon_degus
ENSONIG00000004734	vars2	50	52.660	ENSOANG00000000398	-	58	52.660	Ornithorhynchus_anatinus
ENSONIG00000004734	vars2	99	55.078	ENSORLG00000010632	vars2	93	55.078	Oryzias_latipes
ENSONIG00000004734	vars2	99	55.469	ENSORLG00020018584	vars2	93	55.469	Oryzias_latipes_hni
ENSONIG00000004734	vars2	99	55.371	ENSORLG00015010408	vars2	93	55.371	Oryzias_latipes_hsok
ENSONIG00000004734	vars2	99	55.902	ENSOMEG00000008360	vars2	93	55.902	Oryzias_melastigma
ENSONIG00000004734	vars2	98	37.898	ENSOGAG00000006087	VARS2	91	37.898	Otolemur_garnettii
ENSONIG00000004734	vars2	98	38.008	ENSOARG00000010844	VARS2	91	37.994	Ovis_aries
ENSONIG00000004734	vars2	98	37.524	ENSPPAG00000041141	VARS2	93	37.524	Pan_paniscus
ENSONIG00000004734	vars2	72	56.542	ENSPPRG00000006751	VARS2	65	56.542	Panthera_pardus
ENSONIG00000004734	vars2	72	56.542	ENSPTIG00000017799	VARS2	70	56.542	Panthera_tigris_altaica
ENSONIG00000004734	vars2	98	37.524	ENSPTRG00000034497	VARS2	93	37.524	Pan_troglodytes
ENSONIG00000004734	vars2	98	37.718	ENSPANG00000018481	VARS2	93	37.814	Papio_anubis
ENSONIG00000004734	vars2	100	52.148	ENSPKIG00000011372	vars2	93	52.204	Paramormyrops_kingsleyae
ENSONIG00000004734	vars2	62	39.879	ENSPSIG00000006206	VARS2	92	39.671	Pelodiscus_sinensis
ENSONIG00000004734	vars2	99	53.043	ENSPMGG00000000465	vars2	94	53.243	Periophthalmus_magnuspinnatus
ENSONIG00000004734	vars2	99	37.958	ENSPEMG00000014691	Vars2	92	37.548	Peromyscus_maniculatus_bairdii
ENSONIG00000004734	vars2	71	56.968	ENSPCIG00000015040	VARS2	67	56.968	Phascolarctos_cinereus
ENSONIG00000004734	vars2	100	56.433	ENSPFOG00000017616	vars2	93	56.433	Poecilia_formosa
ENSONIG00000004734	vars2	100	57.018	ENSPLAG00000019778	vars2	94	57.018	Poecilia_latipinna
ENSONIG00000004734	vars2	100	56.934	ENSPMEG00000011123	vars2	94	56.920	Poecilia_mexicana
ENSONIG00000004734	vars2	97	49.203	ENSPREG00000014998	vars2	93	49.104	Poecilia_reticulata
ENSONIG00000004734	vars2	98	37.524	ENSPPYG00000016424	VARS2	93	37.524	Pongo_abelii
ENSONIG00000004734	vars2	74	57.009	ENSPCOG00000014839	VARS2	78	46.552	Propithecus_coquereli
ENSONIG00000004734	vars2	99	38.261	ENSPVAG00000004197	VARS2	92	38.261	Pteropus_vampyrus
ENSONIG00000004734	vars2	83	93.634	ENSPNYG00000010314	vars2	94	93.634	Pundamilia_nyererei
ENSONIG00000004734	vars2	99	51.717	ENSPNAG00000026793	vars2	93	51.667	Pygocentrus_nattereri
ENSONIG00000004734	vars2	72	58.680	ENSRNOG00000000833	Vars2	67	56.036	Rattus_norvegicus
ENSONIG00000004734	vars2	98	37.561	ENSRBIG00000032725	VARS2	93	37.633	Rhinopithecus_bieti
ENSONIG00000004734	vars2	98	37.524	ENSRROG00000043847	VARS2	93	37.597	Rhinopithecus_roxellana
ENSONIG00000004734	vars2	72	57.457	ENSSBOG00000033240	VARS2	77	45.754	Saimiri_boliviensis_boliviensis
ENSONIG00000004734	vars2	99	37.073	ENSSHAG00000009307	VARS2	66	57.213	Sarcophilus_harrisii
ENSONIG00000004734	vars2	100	50.980	ENSSFOG00015016187	vars2	93	50.980	Scleropages_formosus
ENSONIG00000004734	vars2	100	59.531	ENSSMAG00000020842	vars2	93	59.531	Scophthalmus_maximus
ENSONIG00000004734	vars2	100	61.606	ENSSDUG00000011598	vars2	93	61.606	Seriola_dumerili
ENSONIG00000004734	vars2	98	59.880	ENSSLDG00000015492	vars2	64	87.568	Seriola_lalandi_dorsalis
ENSONIG00000004734	vars2	94	41.667	ENSSPUG00000014700	VARS2	95	41.667	Sphenodon_punctatus
ENSONIG00000004734	vars2	100	56.635	ENSSPAG00000004654	vars2	93	56.827	Stegastes_partitus
ENSONIG00000004734	vars2	98	38.803	ENSSSCG00000001384	VARS2	93	38.900	Sus_scrofa
ENSONIG00000004734	vars2	99	54.122	ENSTRUG00000005264	vars2	93	54.179	Takifugu_rubripes
ENSONIG00000004734	vars2	99	53.282	ENSTNIG00000005916	vars2	93	53.475	Tetraodon_nigroviridis
ENSONIG00000004734	vars2	61	61.486	ENSTTRG00000012243	VARS2	56	61.486	Tursiops_truncatus
ENSONIG00000004734	vars2	99	37.898	ENSUAMG00000026124	VARS2	99	37.075	Ursus_americanus
ENSONIG00000004734	vars2	99	38.031	ENSUMAG00000019894	VARS2	92	38.031	Ursus_maritimus
ENSONIG00000004734	vars2	99	37.647	ENSVVUG00000010754	VARS2	87	37.745	Vulpes_vulpes
ENSONIG00000004734	vars2	89	38.817	ENSXETG00000003036	vars2	93	38.172	Xenopus_tropicalis
ENSONIG00000004734	vars2	97	57.243	ENSXCOG00000003455	vars2	94	57.243	Xiphophorus_couchianus
ENSONIG00000004734	vars2	100	58.008	ENSXMAG00000013523	vars2	94	58.008	Xiphophorus_maculatus