EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004857 (Gene tree)
Gene ID: 100704524
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2604 bases
Position: chrGL831183.1:1787791-1790394
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006112	RRM_1	PF00076.22	1.1e-33	1	2
ENSONIP00000006112	RRM_1	PF00076.22	1.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006116	-	759	-	ENSONIP00000006112	253 (aa)	-	I3JB72

Gene Model

Click here to download ENSONIG00000004857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004857's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004857	-	69	49.451	ENSONIG00000019583	srsf5a	60	47.253
ENSONIG00000004857	-	80	84.653	ENSONIG00000013160	-	77	83.168
ENSONIG00000004857	-	67	51.163	ENSONIG00000005759	srsf5b	57	49.711
ENSONIG00000004857	-	79	64.179	ENSONIG00000013974	srsf9	78	64.179
ENSONIG00000004857	-	94	87.866	ENSONIG00000004860	-	81	85.437
ENSONIG00000004857	-	89	38.428	ENSONIG00000001925	-	64	37.917
ENSONIG00000004857	-	68	45.087	ENSONIG00000020247	-	63	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004857	-	76	94.271	ENSACIG00000002623	-	96	94.271	Amphilophus_citrinellus
ENSONIG00000004857	-	80	84.653	ENSACLG00000005676	-	78	83.168	Astatotilapia_calliptera
ENSONIG00000004857	-	99	98.810	ENSACLG00000021693	-	96	98.810	Astatotilapia_calliptera
ENSONIG00000004857	-	77	64.615	WBGene00004700	rsp-3	75	64.615	Caenorhabditis_elegans
ENSONIG00000004857	-	75	70.157	ENSCING00000007375	-	76	68.063	Ciona_intestinalis
ENSONIG00000004857	-	56	61.702	ENSCING00000000257	-	75	60.714	Ciona_intestinalis
ENSONIG00000004857	-	55	58.571	ENSCSAVG00000003567	-	76	57.554	Ciona_savignyi
ENSONIG00000004857	-	75	69.634	ENSCSAVG00000006093	-	91	67.539	Ciona_savignyi
ENSONIG00000004857	-	75	66.492	FBgn0283477	SF2	73	66.492	Drosophila_melanogaster
ENSONIG00000004857	-	99	71.200	ENSEBUG00000009582	-	84	73.659	Eptatretus_burgeri
ENSONIG00000004857	-	81	92.647	ENSFHEG00000017425	-	98	92.188	Fundulus_heteroclitus
ENSONIG00000004857	-	76	84.896	ENSGMOG00000010606	-	97	84.375	Gadus_morhua
ENSONIG00000004857	-	82	93.269	ENSGAFG00000000609	-	80	94.118	Gambusia_affinis
ENSONIG00000004857	-	80	85.149	ENSGAFG00000012721	-	78	83.663	Gambusia_affinis
ENSONIG00000004857	-	75	84.656	ENSGACG00000011094	-	96	83.598	Gasterosteus_aculeatus
ENSONIG00000004857	-	99	98.413	ENSHBUG00000015576	-	96	98.413	Haplochromis_burtoni
ENSONIG00000004857	-	53	60.902	ENSHBUG00000015600	-	95	55.000	Haplochromis_burtoni
ENSONIG00000004857	-	80	80.976	ENSHCOG00000008016	-	79	79.327	Hippocampus_comes
ENSONIG00000004857	-	98	81.423	ENSMFAG00000034223	-	66	83.495	Macaca_fascicularis
ENSONIG00000004857	-	99	98.016	ENSMZEG00005019071	-	99	95.833	Maylandia_zebra
ENSONIG00000004857	-	80	84.653	ENSMZEG00005007947	-	78	83.168	Maylandia_zebra
ENSONIG00000004857	-	81	87.317	ENSMMOG00000018849	-	79	87.805	Mola_mola
ENSONIG00000004857	-	99	98.810	ENSNBRG00000008134	-	96	98.810	Neolamprologus_brichardi
ENSONIG00000004857	-	80	84.653	ENSNBRG00000019981	-	78	83.168	Neolamprologus_brichardi
ENSONIG00000004857	-	69	64.368	ENSOPRG00000004745	-	98	62.712	Ochotona_princeps
ENSONIG00000004857	-	53	87.681	ENSOANG00000007320	-	53	96.512	Ornithorhynchus_anatinus
ENSONIG00000004857	-	72	51.099	ENSOCUG00000026856	-	97	53.297	Oryctolagus_cuniculus
ENSONIG00000004857	-	81	92.195	ENSORLG00000005314	-	77	92.195	Oryzias_latipes
ENSONIG00000004857	-	81	92.195	ENSORLG00015015497	-	77	92.195	Oryzias_latipes_hsok
ENSONIG00000004857	-	99	95.635	ENSOMEG00000017711	-	95	95.635	Oryzias_melastigma
ENSONIG00000004857	-	80	83.415	ENSPLAG00000019553	-	92	81.865	Poecilia_latipinna
ENSONIG00000004857	-	75	84.656	ENSPLAG00000019613	-	71	83.598	Poecilia_latipinna
ENSONIG00000004857	-	82	92.308	ENSPREG00000016792	-	80	93.137	Poecilia_reticulata
ENSONIG00000004857	-	99	98.810	ENSPNYG00000020651	-	96	98.810	Pundamilia_nyererei
ENSONIG00000004857	-	80	84.653	ENSPNYG00000017115	-	78	83.168	Pundamilia_nyererei
ENSONIG00000004857	-	85	88.837	ENSSFOG00015004989	-	72	85.437	Scleropages_formosus
ENSONIG00000004857	-	100	93.822	ENSSDUG00000003887	-	98	93.822	Seriola_dumerili
ENSONIG00000004857	-	81	81.951	ENSTRUG00000017058	-	80	81.463	Takifugu_rubripes
ENSONIG00000004857	-	81	78.744	ENSTNIG00000009993	-	81	78.261	Tetraodon_nigroviridis
ENSONIG00000004857	-	83	92.823	ENSXCOG00000017888	-	80	93.659	Xiphophorus_couchianus
ENSONIG00000004857	-	80	83.415	ENSXCOG00000009643	-	78	83.838	Xiphophorus_couchianus
ENSONIG00000004857	-	82	92.788	ENSXMAG00000010797	-	80	93.627	Xiphophorus_maculatus