EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000004860 (Gene tree)
Gene ID: 100705065
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2684 bases
Position: chrGL831183.1:1793236-1795919
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006115	RRM_1	PF00076.22	3.2e-33	1	2
ENSONIP00000006115	RRM_1	PF00076.22	3.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006119	-	732	-	ENSONIP00000006115	243 (aa)	-	I3JB75

Gene Model

Click here to download ENSONIG00000004860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000004860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000004860	-	79	90.625	ENSONIG00000013160	-	78	91.282
ENSONIG00000004860	-	67	43.407	ENSONIG00000019583	srsf5a	60	43.956
ENSONIG00000004860	-	81	85.437	ENSONIG00000004857	-	94	87.866
ENSONIG00000004860	-	65	46.286	ENSONIG00000005759	srsf5b	57	45.304
ENSONIG00000004860	-	66	46.471	ENSONIG00000020247	-	68	41.736
ENSONIG00000004860	-	79	68.063	ENSONIG00000013974	srsf9	78	69.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000004860	-	81	90.863	ENSG00000136450	SRSF1	100	95.385	Homo_sapiens
ENSONIG00000004860	-	79	90.104	ENSAPOG00000002748	-	79	90.769	Acanthochromis_polyacanthus
ENSONIG00000004860	-	81	91.327	ENSAPOG00000008542	-	96	90.795	Acanthochromis_polyacanthus
ENSONIG00000004860	-	81	90.816	ENSAMEG00000002635	SRSF1	95	88.983	Ailuropoda_melanoleuca
ENSONIG00000004860	-	79	90.625	ENSACIG00000008091	srsf1a	84	91.282	Amphilophus_citrinellus
ENSONIG00000004860	-	81	91.133	ENSAOCG00000000337	-	96	90.795	Amphiprion_ocellaris
ENSONIG00000004860	-	79	90.625	ENSAOCG00000010671	-	84	91.282	Amphiprion_ocellaris
ENSONIG00000004860	-	81	91.133	ENSAPEG00000023352	-	95	90.795	Amphiprion_percula
ENSONIG00000004860	-	79	90.625	ENSAPEG00000009915	-	84	91.282	Amphiprion_percula
ENSONIG00000004860	-	79	90.625	ENSATEG00000022403	-	79	91.282	Anabas_testudineus
ENSONIG00000004860	-	83	87.624	ENSATEG00000021567	-	96	90.086	Anabas_testudineus
ENSONIG00000004860	-	81	90.863	ENSACAG00000005542	-	96	90.717	Anolis_carolinensis
ENSONIG00000004860	-	81	90.863	ENSANAG00000020583	-	99	94.444	Aotus_nancymaae
ENSONIG00000004860	-	82	68.342	ENSANAG00000025417	-	95	67.797	Aotus_nancymaae
ENSONIG00000004860	-	79	90.452	ENSAMXG00000035996	srsf1a	95	89.540	Astyanax_mexicanus
ENSONIG00000004860	-	54	80.645	ENSAMXG00000024373	-	89	80.311	Astyanax_mexicanus
ENSONIG00000004860	-	81	90.863	ENSBTAG00000014766	SRSF1	96	90.717	Bos_taurus
ENSONIG00000004860	-	80	84.694	ENSCJAG00000008111	-	89	86.500	Callithrix_jacchus
ENSONIG00000004860	-	81	90.863	ENSCJAG00000041713	-	99	94.444	Callithrix_jacchus
ENSONIG00000004860	-	81	90.863	ENSCAFG00000017430	SRSF1	94	90.717	Canis_familiaris
ENSONIG00000004860	-	81	90.863	ENSCAFG00020025632	-	94	90.717	Canis_lupus_dingo
ENSONIG00000004860	-	81	90.863	ENSCHIG00000010787	SRSF1	96	90.717	Capra_hircus
ENSONIG00000004860	-	81	90.863	ENSTSYG00000013899	-	99	94.444	Carlito_syrichta
ENSONIG00000004860	-	81	90.863	ENSCPOG00000032681	-	96	90.717	Cavia_porcellus
ENSONIG00000004860	-	81	90.863	ENSCCAG00000029484	-	99	94.444	Cebus_capucinus
ENSONIG00000004860	-	81	90.863	ENSCATG00000042294	-	99	94.444	Cercocebus_atys
ENSONIG00000004860	-	81	90.863	ENSCLAG00000014707	-	96	90.717	Chinchilla_lanigera
ENSONIG00000004860	-	81	89.848	ENSCSAG00000005642	-	94	89.873	Chlorocebus_sabaeus
ENSONIG00000004860	-	81	90.863	ENSCHOG00000001899	SRSF1	96	90.717	Choloepus_hoffmanni
ENSONIG00000004860	-	81	91.371	ENSCPBG00000009851	-	96	91.139	Chrysemys_picta_bellii
ENSONIG00000004860	-	81	90.863	ENSCANG00000029726	-	99	94.444	Colobus_angolensis_palliatus
ENSONIG00000004860	-	81	90.863	ENSCGRG00001000670	Srsf1	94	90.717	Cricetulus_griseus_chok1gshd
ENSONIG00000004860	-	81	90.863	ENSCGRG00000005590	Srsf1	96	90.717	Cricetulus_griseus_crigri
ENSONIG00000004860	-	80	83.019	ENSCSEG00000009973	-	82	82.870	Cynoglossus_semilaevis
ENSONIG00000004860	-	79	90.306	ENSCSEG00000014272	-	82	89.231	Cynoglossus_semilaevis
ENSONIG00000004860	-	79	88.718	ENSCVAG00000005458	-	94	87.931	Cyprinodon_variegatus
ENSONIG00000004860	-	79	90.625	ENSCVAG00000018617	-	79	91.282	Cyprinodon_variegatus
ENSONIG00000004860	-	79	87.745	ENSDARG00000057691	srsf1a	99	89.529	Danio_rerio
ENSONIG00000004860	-	79	92.784	ENSDARG00000017843	srsf1b	95	92.672	Danio_rerio
ENSONIG00000004860	-	81	90.863	ENSDNOG00000011737	-	94	90.717	Dasypus_novemcinctus
ENSONIG00000004860	-	81	90.863	ENSDORG00000015082	Srsf1	96	90.717	Dipodomys_ordii
ENSONIG00000004860	-	75	89.674	ENSETEG00000005349	-	63	91.304	Echinops_telfairi
ENSONIG00000004860	-	81	90.863	ENSEASG00005002922	-	94	90.717	Equus_asinus_asinus
ENSONIG00000004860	-	81	90.863	ENSECAG00000016654	SRSF1	96	90.717	Equus_caballus
ENSONIG00000004860	-	75	90.761	ENSEEUG00000009255	-	63	92.391	Erinaceus_europaeus
ENSONIG00000004860	-	79	92.746	ENSELUG00000021646	srsf1a	78	92.857	Esox_lucius
ENSONIG00000004860	-	81	90.863	ENSFCAG00000002250	-	94	90.717	Felis_catus
ENSONIG00000004860	-	58	96.429	ENSFALG00000005062	-	79	74.000	Ficedula_albicollis
ENSONIG00000004860	-	81	90.863	ENSFDAG00000010646	-	96	90.717	Fukomys_damarensis
ENSONIG00000004860	-	79	90.625	ENSFHEG00000003174	srsf1a	84	91.282	Fundulus_heteroclitus
ENSONIG00000004860	-	92	89.238	ENSGMOG00000014787	-	96	88.158	Gadus_morhua
ENSONIG00000004860	-	81	91.371	ENSGALG00000005525	SRSF1	96	91.139	Gallus_gallus
ENSONIG00000004860	-	81	87.245	ENSGACG00000020621	srsf1b	96	77.021	Gasterosteus_aculeatus
ENSONIG00000004860	-	81	91.371	ENSGAGG00000022965	-	94	91.139	Gopherus_agassizii
ENSONIG00000004860	-	81	90.863	ENSGGOG00000004386	SRSF1	99	94.444	Gorilla_gorilla
ENSONIG00000004860	-	79	90.625	ENSHBUG00000016788	srsf1a	81	91.282	Haplochromis_burtoni
ENSONIG00000004860	-	67	90.244	ENSHGLG00000000669	-	95	90.196	Heterocephalus_glaber_female
ENSONIG00000004860	-	67	90.244	ENSHGLG00000000600	-	95	90.196	Heterocephalus_glaber_female
ENSONIG00000004860	-	81	90.863	ENSHGLG00100016906	-	96	90.717	Heterocephalus_glaber_male
ENSONIG00000004860	-	79	84.772	ENSHCOG00000018918	srsf1a	78	87.500	Hippocampus_comes
ENSONIG00000004860	-	81	95.408	ENSIPUG00000008750	srsf1b	96	92.735	Ictalurus_punctatus
ENSONIG00000004860	-	79	89.447	ENSIPUG00000017039	srsf1a	80	92.079	Ictalurus_punctatus
ENSONIG00000004860	-	81	90.863	ENSSTOG00000000243	-	96	90.717	Ictidomys_tridecemlineatus
ENSONIG00000004860	-	52	88.889	ENSJJAG00000014464	-	95	88.889	Jaculus_jaculus
ENSONIG00000004860	-	81	90.863	ENSJJAG00000000102	-	96	90.717	Jaculus_jaculus
ENSONIG00000004860	-	79	91.667	ENSKMAG00000019232	srsf1a	79	91.795	Kryptolebias_marmoratus
ENSONIG00000004860	-	81	84.500	ENSLBEG00000015294	-	95	85.593	Labrus_bergylta
ENSONIG00000004860	-	79	90.625	ENSLBEG00000020864	-	84	91.282	Labrus_bergylta
ENSONIG00000004860	-	79	92.228	ENSLACG00000014160	srsf1a	88	89.270	Latimeria_chalumnae
ENSONIG00000004860	-	81	94.898	ENSLOCG00000005994	srsf1a	96	90.678	Lepisosteus_oculatus
ENSONIG00000004860	-	81	90.863	ENSLAFG00000025743	SRSF1	96	90.717	Loxodonta_africana
ENSONIG00000004860	-	81	90.863	ENSMFAG00000040003	-	99	94.444	Macaca_fascicularis
ENSONIG00000004860	-	81	90.863	ENSMMUG00000004725	SRSF1	99	94.444	Macaca_mulatta
ENSONIG00000004860	-	81	87.817	ENSMMUG00000003260	-	95	89.286	Macaca_mulatta
ENSONIG00000004860	-	81	87.310	ENSMNEG00000015983	-	94	87.764	Macaca_nemestrina
ENSONIG00000004860	-	81	90.863	ENSMNEG00000027680	-	99	94.444	Macaca_nemestrina
ENSONIG00000004860	-	81	90.863	ENSMLEG00000040509	SRSF1	96	90.717	Mandrillus_leucophaeus
ENSONIG00000004860	-	81	88.776	ENSMLEG00000015243	-	94	86.017	Mandrillus_leucophaeus
ENSONIG00000004860	-	81	91.837	ENSMAMG00000019687	-	95	89.744	Mastacembelus_armatus
ENSONIG00000004860	-	79	90.625	ENSMAMG00000018454	-	79	91.282	Mastacembelus_armatus
ENSONIG00000004860	-	98	97.490	ENSMAMG00000019691	-	99	97.490	Mastacembelus_armatus
ENSONIG00000004860	-	81	90.863	ENSMAUG00000021845	Srsf1	96	90.717	Mesocricetus_auratus
ENSONIG00000004860	-	81	90.863	ENSMICG00000013639	-	99	94.444	Microcebus_murinus
ENSONIG00000004860	-	81	90.863	ENSMOCG00000001996	Srsf1	96	90.717	Microtus_ochrogaster
ENSONIG00000004860	-	79	90.625	ENSMMOG00000014354	srsf1a	84	90.769	Mola_mola
ENSONIG00000004860	-	75	91.892	ENSMODG00000014781	-	63	92.973	Monodelphis_domestica
ENSONIG00000004860	-	79	90.625	ENSMALG00000017129	-	76	91.282	Monopterus_albus
ENSONIG00000004860	-	83	80.198	ENSMALG00000007763	-	95	81.304	Monopterus_albus
ENSONIG00000004860	-	81	90.863	MGP_CAROLIEiJ_G0016943	Srsf1	96	90.717	Mus_caroli
ENSONIG00000004860	-	81	90.863	ENSMUSG00000018379	Srsf1	96	90.717	Mus_musculus
ENSONIG00000004860	-	81	90.863	MGP_PahariEiJ_G0018074	Srsf1	96	90.717	Mus_pahari
ENSONIG00000004860	-	81	90.863	MGP_SPRETEiJ_G0017790	Srsf1	96	90.717	Mus_spretus
ENSONIG00000004860	-	81	90.863	ENSMPUG00000015369	SRSF1	96	90.717	Mustela_putorius_furo
ENSONIG00000004860	-	81	90.863	ENSMLUG00000011040	SRSF1	96	90.717	Myotis_lucifugus
ENSONIG00000004860	-	83	85.149	ENSMLUG00000023995	-	95	84.322	Myotis_lucifugus
ENSONIG00000004860	-	81	90.863	ENSNGAG00000011395	Srsf1	96	90.717	Nannospalax_galili
ENSONIG00000004860	-	100	88.477	ENSNBRG00000008041	srsf1b	95	89.224	Neolamprologus_brichardi
ENSONIG00000004860	-	81	90.863	ENSNLEG00000008088	-	99	94.444	Nomascus_leucogenys
ENSONIG00000004860	-	51	88.976	ENSMEUG00000002783	-	100	90.551	Notamacropus_eugenii
ENSONIG00000004860	-	54	88.636	ENSOPRG00000001234	-	94	88.953	Ochotona_princeps
ENSONIG00000004860	-	80	90.816	ENSODEG00000011481	-	96	90.295	Octodon_degus
ENSONIG00000004860	-	100	68.924	ENSOCUG00000010894	-	79	70.792	Oryctolagus_cuniculus
ENSONIG00000004860	-	79	90.625	ENSORLG00000004580	srsf1a	79	91.282	Oryzias_latipes
ENSONIG00000004860	-	79	90.625	ENSORLG00020009456	srsf1a	84	91.282	Oryzias_latipes_hni
ENSONIG00000004860	-	79	90.625	ENSORLG00015014384	srsf1a	84	91.282	Oryzias_latipes_hsok
ENSONIG00000004860	-	72	89.143	ENSOMEG00000004106	srsf1a	73	89.888	Oryzias_melastigma
ENSONIG00000004860	-	85	90.865	ENSOGAG00000025950	-	96	90.717	Otolemur_garnettii
ENSONIG00000004860	-	81	88.265	ENSOARG00000008323	SRSF1	95	86.076	Ovis_aries
ENSONIG00000004860	-	81	90.863	ENSPPAG00000043403	-	99	94.444	Pan_paniscus
ENSONIG00000004860	-	81	90.863	ENSPPRG00000004238	-	96	90.717	Panthera_pardus
ENSONIG00000004860	-	81	90.863	ENSPTRG00000049077	SRSF1	99	94.444	Pan_troglodytes
ENSONIG00000004860	-	80	68.205	ENSPANG00000030275	-	93	68.376	Papio_anubis
ENSONIG00000004860	-	81	90.863	ENSPANG00000022305	-	99	94.444	Papio_anubis
ENSONIG00000004860	-	79	92.746	ENSPKIG00000007204	srsf1a	94	89.655	Paramormyrops_kingsleyae
ENSONIG00000004860	-	81	95.408	ENSPKIG00000012857	srsf1b	96	92.735	Paramormyrops_kingsleyae
ENSONIG00000004860	-	81	83.920	ENSPSIG00000009000	-	96	84.937	Pelodiscus_sinensis
ENSONIG00000004860	-	79	89.062	ENSPMGG00000013112	-	83	88.205	Periophthalmus_magnuspinnatus
ENSONIG00000004860	-	82	85.930	ENSPMGG00000005467	-	95	85.268	Periophthalmus_magnuspinnatus
ENSONIG00000004860	-	81	90.863	ENSPEMG00000021416	Srsf1	96	90.717	Peromyscus_maniculatus_bairdii
ENSONIG00000004860	-	81	91.414	ENSPCIG00000006076	-	96	90.756	Phascolarctos_cinereus
ENSONIG00000004860	-	81	88.889	ENSPFOG00000018325	-	83	87.879	Poecilia_formosa
ENSONIG00000004860	-	81	88.889	ENSPLAG00000008416	srsf1b	94	87.879	Poecilia_latipinna
ENSONIG00000004860	-	50	88.525	ENSPMEG00000014312	-	98	88.525	Poecilia_mexicana
ENSONIG00000004860	-	50	88.525	ENSPMEG00000020607	-	98	88.525	Poecilia_mexicana
ENSONIG00000004860	-	81	88.889	ENSPMEG00000002388	-	94	87.879	Poecilia_mexicana
ENSONIG00000004860	-	79	90.625	ENSPREG00000009667	srsf1a	79	91.282	Poecilia_reticulata
ENSONIG00000004860	-	81	90.863	ENSPPYG00000008240	SRSF1	96	90.717	Pongo_abelii
ENSONIG00000004860	-	81	90.863	ENSPCAG00000005199	SRSF1	96	90.717	Procavia_capensis
ENSONIG00000004860	-	81	90.863	ENSPCOG00000023654	-	99	94.444	Propithecus_coquereli
ENSONIG00000004860	-	81	74.257	ENSPCOG00000025736	-	95	73.869	Propithecus_coquereli
ENSONIG00000004860	-	56	97.143	ENSPVAG00000000519	-	71	95.385	Pteropus_vampyrus
ENSONIG00000004860	-	79	94.301	ENSPNAG00000022241	srsf1a	95	90.129	Pygocentrus_nattereri
ENSONIG00000004860	-	81	92.347	ENSPNAG00000014601	srsf1b	95	90.171	Pygocentrus_nattereri
ENSONIG00000004860	-	81	90.863	ENSRNOG00000050323	Srsf1	96	90.717	Rattus_norvegicus
ENSONIG00000004860	-	81	90.863	ENSRBIG00000034445	-	99	94.444	Rhinopithecus_bieti
ENSONIG00000004860	-	81	90.863	ENSRROG00000041506	-	99	94.444	Rhinopithecus_roxellana
ENSONIG00000004860	-	81	90.863	ENSSBOG00000025377	-	99	94.444	Saimiri_boliviensis_boliviensis
ENSONIG00000004860	-	81	91.414	ENSSHAG00000002552	-	96	90.756	Sarcophilus_harrisii
ENSONIG00000004860	-	80	94.359	ENSSFOG00015004800	srsf1a	95	91.489	Scleropages_formosus
ENSONIG00000004860	-	79	90.104	ENSSMAG00000007018	-	79	90.769	Scophthalmus_maximus
ENSONIG00000004860	-	81	87.255	ENSSMAG00000009719	-	96	84.426	Scophthalmus_maximus
ENSONIG00000004860	-	79	90.625	ENSSDUG00000011303	-	84	91.282	Seriola_dumerili
ENSONIG00000004860	-	99	79.757	ENSSDUG00000003929	-	85	88.177	Seriola_dumerili
ENSONIG00000004860	-	95	81.385	ENSSLDG00000016895	-	95	81.974	Seriola_lalandi_dorsalis
ENSONIG00000004860	-	79	90.625	ENSSLDG00000010543	-	79	91.282	Seriola_lalandi_dorsalis
ENSONIG00000004860	-	81	79.695	ENSSLDG00000016868	-	94	82.128	Seriola_lalandi_dorsalis
ENSONIG00000004860	-	75	90.761	ENSSARG00000010949	-	63	92.391	Sorex_araneus
ENSONIG00000004860	-	81	91.371	ENSSPUG00000000804	-	93	92.935	Sphenodon_punctatus
ENSONIG00000004860	-	81	88.517	ENSSPAG00000014152	-	95	88.163	Stegastes_partitus
ENSONIG00000004860	-	79	91.667	ENSSPAG00000022562	-	79	91.795	Stegastes_partitus
ENSONIG00000004860	-	81	90.863	ENSSSCG00000017626	-	96	90.717	Sus_scrofa
ENSONIG00000004860	-	54	89.474	ENSTGUG00000008416	-	94	89.595	Taeniopygia_guttata
ENSONIG00000004860	-	79	90.104	ENSTRUG00000003691	srsf1a	79	90.769	Takifugu_rubripes
ENSONIG00000004860	-	79	90.104	ENSTNIG00000016223	srsf1a	79	90.769	Tetraodon_nigroviridis
ENSONIG00000004860	-	75	89.130	ENSTBEG00000015378	-	63	91.848	Tupaia_belangeri
ENSONIG00000004860	-	54	88.636	ENSTTRG00000007310	SRSF1	94	88.953	Tursiops_truncatus
ENSONIG00000004860	-	81	90.863	ENSUAMG00000009858	SRSF1	96	90.717	Ursus_americanus
ENSONIG00000004860	-	81	90.863	ENSUMAG00000000455	-	94	90.717	Ursus_maritimus
ENSONIG00000004860	-	81	90.355	ENSVPAG00000010094	SRSF1	96	90.295	Vicugna_pacos
ENSONIG00000004860	-	81	90.863	ENSVVUG00000011882	-	94	90.717	Vulpes_vulpes
ENSONIG00000004860	-	81	89.286	ENSXETG00000008954	srsf1	96	83.594	Xenopus_tropicalis
ENSONIG00000004860	-	79	90.625	ENSXMAG00000011766	srsf1a	79	91.282	Xiphophorus_maculatus