EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005003 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: -
Full Name: zgc:162730
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 1047 bases
Position: chrGL831147.1:879414-880460
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006293	zf-CCCH	PF00642.24	1.2e-21	1	2
ENSONIP00000006293	zf-CCCH	PF00642.24	1.2e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006297	-	903	-	ENSONIP00000006293	300 (aa)	-	I3JBQ3

Gene Model

Click here to download ENSONIG00000005003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005003	zgc:162730	80	41.754	ENSONIG00000001259	sb:cb81	79	42.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005003	zgc:162730	100	69.296	ENSAPOG00000014920	zgc:162730	83	69.296	Acanthochromis_polyacanthus
ENSONIG00000005003	zgc:162730	70	81.132	ENSACIG00000017366	zgc:162730	97	81.132	Amphilophus_citrinellus
ENSONIG00000005003	zgc:162730	97	41.083	ENSAOCG00000024158	sb:cb81	66	40.794	Amphiprion_ocellaris
ENSONIG00000005003	zgc:162730	100	70.423	ENSAOCG00000002001	zgc:162730	83	68.451	Amphiprion_ocellaris
ENSONIG00000005003	zgc:162730	100	70.423	ENSAPEG00000015490	zgc:162730	87	68.451	Amphiprion_percula
ENSONIG00000005003	zgc:162730	97	41.083	ENSAPEG00000022405	sb:cb81	66	41.155	Amphiprion_percula
ENSONIG00000005003	zgc:162730	97	37.644	ENSATEG00000003462	sb:cb81	61	41.199	Anabas_testudineus
ENSONIG00000005003	zgc:162730	99	66.193	ENSATEG00000008790	zgc:162730	83	66.382	Anabas_testudineus
ENSONIG00000005003	zgc:162730	100	79.023	ENSACLG00000022112	zgc:162730	86	79.598	Astatotilapia_calliptera
ENSONIG00000005003	zgc:162730	98	41.714	ENSACLG00000013759	sb:cb81	51	43.119	Astatotilapia_calliptera
ENSONIG00000005003	zgc:162730	63	50.000	ENSAMXG00000034874	sb:cb81	54	47.887	Astyanax_mexicanus
ENSONIG00000005003	zgc:162730	100	50.943	ENSAMXG00000035945	zgc:162730	68	53.360	Astyanax_mexicanus
ENSONIG00000005003	zgc:162730	83	40.977	ENSCAFG00000016497	ZFP36L1	70	40.977	Canis_familiaris
ENSONIG00000005003	zgc:162730	83	40.977	ENSCAFG00020005951	ZFP36L1	70	40.977	Canis_lupus_dingo
ENSONIG00000005003	zgc:162730	83	40.602	ENSCAPG00000005988	ZFP36L1	70	40.602	Cavia_aperea
ENSONIG00000005003	zgc:162730	83	41.199	ENSCPBG00000021516	ZFP36L1	70	39.850	Chrysemys_picta_bellii
ENSONIG00000005003	zgc:162730	100	67.227	ENSCSEG00000018283	zgc:162730	95	77.934	Cynoglossus_semilaevis
ENSONIG00000005003	zgc:162730	99	40.395	ENSCVAG00000009207	sb:cb81	62	42.049	Cyprinodon_variegatus
ENSONIG00000005003	zgc:162730	100	67.435	ENSCVAG00000018571	zgc:162730	83	67.435	Cyprinodon_variegatus
ENSONIG00000005003	zgc:162730	97	37.954	ENSDARG00000021443	zfp36l1b	64	39.474	Danio_rerio
ENSONIG00000005003	zgc:162730	100	55.116	ENSDARG00000103720	zgc:162730	72	61.475	Danio_rerio
ENSONIG00000005003	zgc:162730	83	38.610	ENSELUG00000008675	zfp36l1b	62	38.846	Esox_lucius
ENSONIG00000005003	zgc:162730	100	57.812	ENSELUG00000013158	zgc:162730	84	56.875	Esox_lucius
ENSONIG00000005003	zgc:162730	97	39.450	ENSELUG00000013045	sb:cb81	62	40.385	Esox_lucius
ENSONIG00000005003	zgc:162730	98	68.222	ENSFHEG00000013710	zgc:162730	82	67.341	Fundulus_heteroclitus
ENSONIG00000005003	zgc:162730	80	46.840	ENSFHEG00000022187	sb:cb81	61	45.522	Fundulus_heteroclitus
ENSONIG00000005003	zgc:162730	81	38.491	ENSGMOG00000016803	sb:cb81	90	41.985	Gadus_morhua
ENSONIG00000005003	zgc:162730	95	61.801	ENSGMOG00000017242	zgc:162730	85	65.455	Gadus_morhua
ENSONIG00000005003	zgc:162730	83	42.481	ENSGALG00000039228	ZFP36L1	70	42.481	Gallus_gallus
ENSONIG00000005003	zgc:162730	67	42.466	ENSGAFG00000009949	zgc:114130	51	46.369	Gambusia_affinis
ENSONIG00000005003	zgc:162730	99	43.450	ENSGAFG00000015700	sb:cb81	65	44.238	Gambusia_affinis
ENSONIG00000005003	zgc:162730	98	69.006	ENSGAFG00000009953	zgc:162730	82	66.185	Gambusia_affinis
ENSONIG00000005003	zgc:162730	95	69.159	ENSGACG00000008351	zgc:162730	86	70.144	Gasterosteus_aculeatus
ENSONIG00000005003	zgc:162730	97	40.673	ENSGACG00000013400	sb:cb81	61	46.078	Gasterosteus_aculeatus
ENSONIG00000005003	zgc:162730	98	40.510	ENSHBUG00000002383	sb:cb81	51	42.534	Haplochromis_burtoni
ENSONIG00000005003	zgc:162730	100	78.736	ENSHBUG00000015057	zgc:162730	86	79.310	Haplochromis_burtoni
ENSONIG00000005003	zgc:162730	99	63.662	ENSHCOG00000015801	zgc:162730	69	69.153	Hippocampus_comes
ENSONIG00000005003	zgc:162730	69	34.742	ENSHCOG00000012747	zfp36l1b	91	33.953	Hippocampus_comes
ENSONIG00000005003	zgc:162730	100	53.086	ENSIPUG00000018248	zgc:162730	70	57.576	Ictalurus_punctatus
ENSONIG00000005003	zgc:162730	99	37.812	ENSKMAG00000013156	zfp36l1a	62	39.313	Kryptolebias_marmoratus
ENSONIG00000005003	zgc:162730	99	68.481	ENSKMAG00000019277	zgc:162730	82	65.903	Kryptolebias_marmoratus
ENSONIG00000005003	zgc:162730	99	37.273	ENSLBEG00000018376	sb:cb81	61	41.852	Labrus_bergylta
ENSONIG00000005003	zgc:162730	100	67.330	ENSLBEG00000018380	zgc:162730	83	65.625	Labrus_bergylta
ENSONIG00000005003	zgc:162730	97	41.640	ENSLACG00000015732	sb:cb81	78	41.433	Latimeria_chalumnae
ENSONIG00000005003	zgc:162730	94	43.243	ENSLACG00000015980	-	71	42.800	Latimeria_chalumnae
ENSONIG00000005003	zgc:162730	97	41.796	ENSLOCG00000014587	sb:cb81	64	46.494	Lepisosteus_oculatus
ENSONIG00000005003	zgc:162730	94	55.814	ENSLOCG00000014597	zgc:162730	68	58.687	Lepisosteus_oculatus
ENSONIG00000005003	zgc:162730	100	67.227	ENSMAMG00000007516	zgc:162730	82	67.606	Mastacembelus_armatus
ENSONIG00000005003	zgc:162730	80	43.333	ENSMAMG00000020144	sb:cb81	55	43.333	Mastacembelus_armatus
ENSONIG00000005003	zgc:162730	98	41.667	ENSMZEG00005024684	sb:cb81	51	43.056	Maylandia_zebra
ENSONIG00000005003	zgc:162730	100	84.858	ENSMZEG00005014415	zgc:162730	97	90.094	Maylandia_zebra
ENSONIG00000005003	zgc:162730	98	41.787	ENSMZEG00005016001	-	51	43.256	Maylandia_zebra
ENSONIG00000005003	zgc:162730	72	75.431	ENSMMOG00000011506	zgc:162730	99	75.862	Mola_mola
ENSONIG00000005003	zgc:162730	83	37.548	ENSMODG00000010122	ZFP36L1	67	36.923	Monodelphis_domestica
ENSONIG00000005003	zgc:162730	100	66.852	ENSMALG00000002348	zgc:162730	84	66.295	Monopterus_albus
ENSONIG00000005003	zgc:162730	80	36.293	ENSMALG00000021140	-	96	34.241	Monopterus_albus
ENSONIG00000005003	zgc:162730	83	40.602	ENSMPUG00000007282	ZFP36L1	74	40.602	Mustela_putorius_furo
ENSONIG00000005003	zgc:162730	64	41.232	ENSNBRG00000013703	zgc:114130	53	45.856	Neolamprologus_brichardi
ENSONIG00000005003	zgc:162730	100	78.736	ENSNBRG00000013701	zgc:162730	86	79.310	Neolamprologus_brichardi
ENSONIG00000005003	zgc:162730	83	42.697	ENSMEUG00000003070	ZFP36L1	70	42.105	Notamacropus_eugenii
ENSONIG00000005003	zgc:162730	99	61.159	ENSORLG00000027149	zgc:162730	83	58.892	Oryzias_latipes
ENSONIG00000005003	zgc:162730	99	58.924	ENSORLG00020020289	zgc:162730	83	57.971	Oryzias_latipes_hni
ENSONIG00000005003	zgc:162730	99	59.040	ENSORLG00015001519	zgc:162730	83	58.382	Oryzias_latipes_hsok
ENSONIG00000005003	zgc:162730	99	64.103	ENSOMEG00000017752	zgc:162730	83	61.823	Oryzias_melastigma
ENSONIG00000005003	zgc:162730	80	40.784	ENSPTIG00000019155	ZFP36L1	75	40.784	Panthera_tigris_altaica
ENSONIG00000005003	zgc:162730	83	42.697	ENSPCIG00000019895	ZFP36L1	61	42.105	Phascolarctos_cinereus
ENSONIG00000005003	zgc:162730	67	41.739	ENSPFOG00000003653	zgc:114130	54	44.737	Poecilia_formosa
ENSONIG00000005003	zgc:162730	99	70.871	ENSPFOG00000003665	zgc:162730	99	70.871	Poecilia_formosa
ENSONIG00000005003	zgc:162730	99	43.450	ENSPFOG00000013806	sb:cb81	63	45.420	Poecilia_formosa
ENSONIG00000005003	zgc:162730	98	69.298	ENSPLAG00000000946	zgc:162730	82	66.474	Poecilia_latipinna
ENSONIG00000005003	zgc:162730	99	43.450	ENSPLAG00000020158	sb:cb81	73	44.322	Poecilia_latipinna
ENSONIG00000005003	zgc:162730	98	68.713	ENSPMEG00000000341	zgc:162730	82	65.896	Poecilia_mexicana
ENSONIG00000005003	zgc:162730	99	43.450	ENSPMEG00000022425	sb:cb81	63	45.420	Poecilia_mexicana
ENSONIG00000005003	zgc:162730	98	69.883	ENSPREG00000021263	zgc:162730	82	67.052	Poecilia_reticulata
ENSONIG00000005003	zgc:162730	99	42.991	ENSPREG00000017495	sb:cb81	78	42.679	Poecilia_reticulata
ENSONIG00000005003	zgc:162730	100	79.023	ENSPNYG00000015553	zgc:162730	86	79.598	Pundamilia_nyererei
ENSONIG00000005003	zgc:162730	100	52.548	ENSPNAG00000023018	zgc:162730	69	56.917	Pygocentrus_nattereri
ENSONIG00000005003	zgc:162730	83	42.322	ENSSHAG00000011647	ZFP36L1	70	41.729	Sarcophilus_harrisii
ENSONIG00000005003	zgc:162730	97	37.380	ENSSFOG00015003179	sb:cb81	62	36.981	Scleropages_formosus
ENSONIG00000005003	zgc:162730	59	43.316	ENSSMAG00000018208	-	53	42.703	Scophthalmus_maximus
ENSONIG00000005003	zgc:162730	100	66.760	ENSSMAG00000018612	zgc:162730	83	67.318	Scophthalmus_maximus
ENSONIG00000005003	zgc:162730	99	73.994	ENSSDUG00000002247	zgc:162730	81	75.078	Seriola_dumerili
ENSONIG00000005003	zgc:162730	97	40.974	ENSSDUG00000004426	sb:cb81	64	41.297	Seriola_dumerili
ENSONIG00000005003	zgc:162730	98	33.708	ENSSDUG00000002237	zgc:114130	50	40.092	Seriola_dumerili
ENSONIG00000005003	zgc:162730	99	73.684	ENSSLDG00000008502	zgc:162730	81	74.766	Seriola_lalandi_dorsalis
ENSONIG00000005003	zgc:162730	85	38.577	ENSSLDG00000011048	zfp36l1b	64	38.868	Seriola_lalandi_dorsalis
ENSONIG00000005003	zgc:162730	97	40.974	ENSSLDG00000018035	sb:cb81	65	41.297	Seriola_lalandi_dorsalis
ENSONIG00000005003	zgc:162730	83	41.697	ENSSPUG00000002037	ZFP36L1	70	40.977	Sphenodon_punctatus
ENSONIG00000005003	zgc:162730	100	71.831	ENSSPAG00000006851	zgc:162730	83	69.859	Stegastes_partitus
ENSONIG00000005003	zgc:162730	97	38.462	ENSSPAG00000013546	sb:cb81	68	41.429	Stegastes_partitus
ENSONIG00000005003	zgc:162730	99	68.696	ENSTRUG00000021229	zgc:162730	82	68.023	Takifugu_rubripes
ENSONIG00000005003	zgc:162730	99	74.528	ENSTNIG00000000183	zgc:162730	84	73.502	Tetraodon_nigroviridis
ENSONIG00000005003	zgc:162730	83	41.199	ENSVVUG00000003551	ZFP36L1	70	41.199	Vulpes_vulpes
ENSONIG00000005003	zgc:162730	98	68.529	ENSXCOG00000012791	zgc:162730	82	65.698	Xiphophorus_couchianus
ENSONIG00000005003	zgc:162730	75	39.834	ENSXCOG00000010688	sb:cb81	86	39.431	Xiphophorus_couchianus
ENSONIG00000005003	zgc:162730	99	45.048	ENSXMAG00000004681	sb:cb81	65	45.725	Xiphophorus_maculatus
ENSONIG00000005003	zgc:162730	98	69.118	ENSXMAG00000018206	zgc:162730	82	66.279	Xiphophorus_maculatus