EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005004 (Gene tree)
Gene ID: -
Gene Symbol: zgc:114130
Alias: -
Full Name: zgc:114130
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 1002 bases
Position: chrGL831147.1:906986-907987
Accession: ZDB-GENE-050913-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006294	zf-CCCH	PF00642.24	9.4e-21	1	2
ENSONIP00000006294	zf-CCCH	PF00642.24	9.4e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006298	-	966	-	ENSONIP00000006294	322 (aa)	-	I3JBQ4

Gene Model

Click here to download ENSONIG00000005004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005004	zgc:114130	100	71.429	ENSAPOG00000014912	zgc:114130	78	71.429	Acanthochromis_polyacanthus
ENSONIG00000005004	zgc:114130	100	78.107	ENSACIG00000017364	zgc:114130	93	81.065	Amphilophus_citrinellus
ENSONIG00000005004	zgc:114130	100	71.429	ENSAOCG00000022227	zgc:114130	78	71.429	Amphiprion_ocellaris
ENSONIG00000005004	zgc:114130	100	72.012	ENSAPEG00000015497	zgc:114130	78	72.012	Amphiprion_percula
ENSONIG00000005004	zgc:114130	100	67.052	ENSATEG00000008781	zgc:114130	78	67.049	Anabas_testudineus
ENSONIG00000005004	zgc:114130	100	90.390	ENSACLG00000022113	zgc:114130	77	90.419	Astatotilapia_calliptera
ENSONIG00000005004	zgc:114130	99	47.076	ENSAMXG00000038581	zgc:114130	77	46.356	Astyanax_mexicanus
ENSONIG00000005004	zgc:114130	97	34.783	ENSCSEG00000018283	zgc:162730	95	31.556	Cynoglossus_semilaevis
ENSONIG00000005004	zgc:114130	99	62.899	ENSCSEG00000018290	zgc:114130	78	62.609	Cynoglossus_semilaevis
ENSONIG00000005004	zgc:114130	99	61.988	ENSCVAG00000018574	zgc:114130	79	61.404	Cyprinodon_variegatus
ENSONIG00000005004	zgc:114130	100	50.305	ENSDARG00000040725	zgc:114130	76	51.376	Danio_rerio
ENSONIG00000005004	zgc:114130	98	40.823	ENSDARG00000040503	sb:cb81	61	44.015	Danio_rerio
ENSONIG00000005004	zgc:114130	100	52.553	ENSELUG00000013151	zgc:114130	76	51.672	Esox_lucius
ENSONIG00000005004	zgc:114130	80	41.154	ENSELUG00000013158	zgc:162730	67	39.922	Esox_lucius
ENSONIG00000005004	zgc:114130	99	58.671	ENSFHEG00000000656	zgc:114130	79	58.092	Fundulus_heteroclitus
ENSONIG00000005004	zgc:114130	99	61.162	ENSGMOG00000017223	zgc:114130	99	61.043	Gadus_morhua
ENSONIG00000005004	zgc:114130	99	67.485	ENSGAFG00000009949	zgc:114130	90	65.951	Gambusia_affinis
ENSONIG00000005004	zgc:114130	57	41.709	ENSGACG00000008351	zgc:162730	59	42.935	Gasterosteus_aculeatus
ENSONIG00000005004	zgc:114130	100	72.783	ENSGACG00000008344	zgc:114130	100	72.171	Gasterosteus_aculeatus
ENSONIG00000005004	zgc:114130	100	91.592	ENSHBUG00000015051	zgc:114130	77	91.317	Haplochromis_burtoni
ENSONIG00000005004	zgc:114130	100	63.690	ENSHCOG00000015800	zgc:114130	76	62.651	Hippocampus_comes
ENSONIG00000005004	zgc:114130	99	47.239	ENSIPUG00000018256	zgc:114130	65	45.652	Ictalurus_punctatus
ENSONIG00000005004	zgc:114130	99	68.328	ENSKMAG00000019287	zgc:114130	78	67.919	Kryptolebias_marmoratus
ENSONIG00000005004	zgc:114130	81	43.182	ENSKMAG00000013156	zfp36l1a	61	41.603	Kryptolebias_marmoratus
ENSONIG00000005004	zgc:114130	99	63.636	ENSLBEG00000018387	zgc:114130	77	63.848	Labrus_bergylta
ENSONIG00000005004	zgc:114130	86	45.486	ENSLACG00000015732	sb:cb81	65	43.446	Latimeria_chalumnae
ENSONIG00000005004	zgc:114130	63	50.000	ENSLOCG00000014587	sb:cb81	50	49.029	Lepisosteus_oculatus
ENSONIG00000005004	zgc:114130	100	67.257	ENSMAMG00000007511	zgc:114130	76	66.372	Mastacembelus_armatus
ENSONIG00000005004	zgc:114130	100	90.691	ENSMZEG00005014410	zgc:114130	77	90.419	Maylandia_zebra
ENSONIG00000005004	zgc:114130	99	72.923	ENSMMOG00000011504	zgc:114130	90	72.000	Mola_mola
ENSONIG00000005004	zgc:114130	72	32.645	ENSMMOG00000011506	zgc:162730	69	32.919	Mola_mola
ENSONIG00000005004	zgc:114130	100	93.478	ENSNBRG00000013703	zgc:114130	94	93.478	Neolamprologus_brichardi
ENSONIG00000005004	zgc:114130	99	68.389	ENSPFOG00000003653	zgc:114130	93	67.683	Poecilia_formosa
ENSONIG00000005004	zgc:114130	99	64.740	ENSPLAG00000000947	zgc:114130	79	64.638	Poecilia_latipinna
ENSONIG00000005004	zgc:114130	99	63.793	ENSPMEG00000015335	zgc:114130	79	64.841	Poecilia_mexicana
ENSONIG00000005004	zgc:114130	99	66.474	ENSPREG00000021254	zgc:114130	79	65.896	Poecilia_reticulata
ENSONIG00000005004	zgc:114130	100	91.867	ENSPNYG00000015546	zgc:114130	77	91.592	Pundamilia_nyererei
ENSONIG00000005004	zgc:114130	99	41.642	ENSPNAG00000023029	zgc:114130	78	46.532	Pygocentrus_nattereri
ENSONIG00000005004	zgc:114130	97	35.463	ENSSFOG00015003179	sb:cb81	72	35.783	Scleropages_formosus
ENSONIG00000005004	zgc:114130	99	66.172	ENSSMAG00000018621	zgc:114130	74	64.392	Scophthalmus_maximus
ENSONIG00000005004	zgc:114130	99	72.141	ENSSDUG00000002237	zgc:114130	79	72.141	Seriola_dumerili
ENSONIG00000005004	zgc:114130	99	72.059	ENSSLDG00000008496	zgc:114130	79	72.059	Seriola_lalandi_dorsalis
ENSONIG00000005004	zgc:114130	100	70.554	ENSSPAG00000006856	zgc:114130	78	69.679	Stegastes_partitus
ENSONIG00000005004	zgc:114130	99	66.172	ENSTRUG00000022473	zgc:114130	77	65.875	Takifugu_rubripes
ENSONIG00000005004	zgc:114130	98	57.500	ENSXCOG00000012792	zgc:114130	80	56.740	Xiphophorus_couchianus
ENSONIG00000005004	zgc:114130	99	65.797	ENSXMAG00000026836	zgc:114130	79	64.928	Xiphophorus_maculatus