EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005115 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: -
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 4372 bases
Position: chrGL831240.1:696476-700847
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006429	dsrm	PF00035.26	7.5e-35	1	2
ENSONIP00000006429	dsrm	PF00035.26	7.5e-35	2	2
ENSONIP00000006430	dsrm	PF00035.26	1.6e-34	1	2
ENSONIP00000006430	dsrm	PF00035.26	1.6e-34	2	2
ENSONIP00000006429	DND1_DSRM	PF14709.7	3.9e-12	1	1
ENSONIP00000006430	DND1_DSRM	PF14709.7	5.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006435	-	1089	-	ENSONIP00000006430	362 (aa)	-	I3JC40
ENSONIT00000006434	-	945	-	ENSONIP00000006429	314 (aa)	-	I3JC39

Gene Model

Click here to download ENSONIG00000005115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005115	tarbp2	89	47.163	ENSONIG00000008579	prkra	97	47.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005115	tarbp2	97	67.705	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSONIG00000005115	tarbp2	96	89.943	ENSAPOG00000019892	tarbp2	95	89.943	Acanthochromis_polyacanthus
ENSONIG00000005115	tarbp2	97	68.272	ENSAMEG00000012601	TARBP2	96	68.750	Ailuropoda_melanoleuca
ENSONIG00000005115	tarbp2	96	91.379	ENSACIG00000016780	tarbp2	95	91.379	Amphilophus_citrinellus
ENSONIG00000005115	tarbp2	96	90.517	ENSAOCG00000005201	tarbp2	95	90.517	Amphiprion_ocellaris
ENSONIG00000005115	tarbp2	96	90.517	ENSAPEG00000008376	tarbp2	95	90.517	Amphiprion_percula
ENSONIG00000005115	tarbp2	96	89.080	ENSATEG00000025012	tarbp2	95	89.080	Anabas_testudineus
ENSONIG00000005115	tarbp2	96	69.318	ENSACAG00000001100	TARBP2	95	68.466	Anolis_carolinensis
ENSONIG00000005115	tarbp2	97	66.856	ENSANAG00000034453	TARBP2	75	91.525	Aotus_nancymaae
ENSONIG00000005115	tarbp2	96	93.391	ENSACLG00000018569	tarbp2	95	93.391	Astatotilapia_calliptera
ENSONIG00000005115	tarbp2	96	79.083	ENSAMXG00000016665	tarbp2	95	79.083	Astyanax_mexicanus
ENSONIG00000005115	tarbp2	97	67.705	ENSBTAG00000000435	TARBP2	96	69.034	Bos_taurus
ENSONIG00000005115	tarbp2	97	67.139	ENSCJAG00000018668	TARBP2	96	68.182	Callithrix_jacchus
ENSONIG00000005115	tarbp2	97	67.139	ENSCAFG00000006874	TARBP2	95	69.018	Canis_familiaris
ENSONIG00000005115	tarbp2	97	67.989	ENSCAFG00020020735	TARBP2	100	68.208	Canis_lupus_dingo
ENSONIG00000005115	tarbp2	97	65.312	ENSCHIG00000026017	TARBP2	96	68.067	Capra_hircus
ENSONIG00000005115	tarbp2	97	68.555	ENSTSYG00000035683	TARBP2	75	91.525	Carlito_syrichta
ENSONIG00000005115	tarbp2	67	68.000	ENSCAPG00000008981	TARBP2	100	69.778	Cavia_aperea
ENSONIG00000005115	tarbp2	97	67.614	ENSCPOG00000001009	TARBP2	96	68.466	Cavia_porcellus
ENSONIG00000005115	tarbp2	97	66.856	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSONIG00000005115	tarbp2	97	67.422	ENSCATG00000026344	TARBP2	75	91.525	Cercocebus_atys
ENSONIG00000005115	tarbp2	97	67.989	ENSCLAG00000009175	TARBP2	96	68.466	Chinchilla_lanigera
ENSONIG00000005115	tarbp2	97	67.422	ENSCSAG00000005479	TARBP2	96	67.898	Chlorocebus_sabaeus
ENSONIG00000005115	tarbp2	96	69.914	ENSCPBG00000000654	TARBP2	100	67.647	Chrysemys_picta_bellii
ENSONIG00000005115	tarbp2	97	67.705	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSONIG00000005115	tarbp2	97	67.139	ENSCGRG00001011856	TARBP2	96	67.614	Cricetulus_griseus_chok1gshd
ENSONIG00000005115	tarbp2	97	67.139	ENSCGRG00000009088	TARBP2	100	66.939	Cricetulus_griseus_crigri
ENSONIG00000005115	tarbp2	96	86.207	ENSCSEG00000010631	tarbp2	95	86.207	Cynoglossus_semilaevis
ENSONIG00000005115	tarbp2	96	85.057	ENSCVAG00000009832	tarbp2	95	85.057	Cyprinodon_variegatus
ENSONIG00000005115	tarbp2	96	78.348	ENSDARG00000070471	tarbp2	95	78.917	Danio_rerio
ENSONIG00000005115	tarbp2	97	67.989	ENSDNOG00000002144	TARBP2	96	68.466	Dasypus_novemcinctus
ENSONIG00000005115	tarbp2	65	68.326	ENSDORG00000001390	Tarbp2	91	70.588	Dipodomys_ordii
ENSONIG00000005115	tarbp2	85	93.827	ENSETEG00000002458	TARBP2	77	93.750	Echinops_telfairi
ENSONIG00000005115	tarbp2	93	59.873	ENSEBUG00000002377	tarbp2	98	60.828	Eptatretus_burgeri
ENSONIG00000005115	tarbp2	97	67.898	ENSEASG00005010030	TARBP2	96	68.750	Equus_asinus_asinus
ENSONIG00000005115	tarbp2	97	67.898	ENSECAG00000011695	TARBP2	75	91.525	Equus_caballus
ENSONIG00000005115	tarbp2	82	65.217	ENSEEUG00000001128	-	95	64.765	Erinaceus_europaeus
ENSONIG00000005115	tarbp2	98	79.070	ENSELUG00000010642	tarbp2	95	83.191	Esox_lucius
ENSONIG00000005115	tarbp2	97	68.555	ENSFCAG00000007757	TARBP2	96	69.034	Felis_catus
ENSONIG00000005115	tarbp2	97	68.272	ENSFDAG00000011932	TARBP2	100	68.163	Fukomys_damarensis
ENSONIG00000005115	tarbp2	95	85.174	ENSFHEG00000016118	tarbp2	100	85.174	Fundulus_heteroclitus
ENSONIG00000005115	tarbp2	96	83.143	ENSGMOG00000001290	tarbp2	95	83.143	Gadus_morhua
ENSONIG00000005115	tarbp2	68	68.000	ENSGALG00000038939	-	87	70.000	Gallus_gallus
ENSONIG00000005115	tarbp2	96	85.345	ENSGAFG00000013341	tarbp2	95	85.345	Gambusia_affinis
ENSONIG00000005115	tarbp2	96	83.799	ENSGACG00000006645	tarbp2	95	82.682	Gasterosteus_aculeatus
ENSONIG00000005115	tarbp2	96	69.914	ENSGAGG00000021169	TARBP2	95	69.318	Gopherus_agassizii
ENSONIG00000005115	tarbp2	97	67.705	ENSGGOG00000012637	TARBP2	75	91.525	Gorilla_gorilla
ENSONIG00000005115	tarbp2	96	93.678	ENSHBUG00000018639	tarbp2	95	93.678	Haplochromis_burtoni
ENSONIG00000005115	tarbp2	97	67.989	ENSHGLG00000001284	TARBP2	96	68.182	Heterocephalus_glaber_female
ENSONIG00000005115	tarbp2	97	67.989	ENSHGLG00100011274	TARBP2	96	68.182	Heterocephalus_glaber_male
ENSONIG00000005115	tarbp2	96	83.046	ENSHCOG00000001027	tarbp2	95	83.046	Hippocampus_comes
ENSONIG00000005115	tarbp2	95	80.805	ENSIPUG00000023701	tarbp2	94	81.447	Ictalurus_punctatus
ENSONIG00000005115	tarbp2	97	67.705	ENSSTOG00000003678	TARBP2	100	68.163	Ictidomys_tridecemlineatus
ENSONIG00000005115	tarbp2	96	87.931	ENSKMAG00000012142	tarbp2	95	87.931	Kryptolebias_marmoratus
ENSONIG00000005115	tarbp2	96	89.080	ENSLBEG00000015027	tarbp2	95	89.080	Labrus_bergylta
ENSONIG00000005115	tarbp2	71	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSONIG00000005115	tarbp2	96	78.161	ENSLOCG00000005711	tarbp2	95	78.963	Lepisosteus_oculatus
ENSONIG00000005115	tarbp2	74	63.333	ENSLAFG00000002620	TARBP2	70	91.379	Loxodonta_africana
ENSONIG00000005115	tarbp2	97	67.422	ENSMFAG00000013567	TARBP2	75	91.525	Macaca_fascicularis
ENSONIG00000005115	tarbp2	97	67.705	ENSMMUG00000018492	TARBP2	96	68.182	Macaca_mulatta
ENSONIG00000005115	tarbp2	97	67.422	ENSMNEG00000036477	TARBP2	75	91.525	Macaca_nemestrina
ENSONIG00000005115	tarbp2	97	67.422	ENSMLEG00000029583	TARBP2	75	91.525	Mandrillus_leucophaeus
ENSONIG00000005115	tarbp2	97	83.288	ENSMAMG00000010272	tarbp2	98	83.060	Mastacembelus_armatus
ENSONIG00000005115	tarbp2	96	93.678	ENSMZEG00005006895	tarbp2	95	93.678	Maylandia_zebra
ENSONIG00000005115	tarbp2	97	66.856	ENSMAUG00000019805	Tarbp2	96	67.614	Mesocricetus_auratus
ENSONIG00000005115	tarbp2	95	68.012	ENSMICG00000027441	TARBP2	100	68.497	Microcebus_murinus
ENSONIG00000005115	tarbp2	97	68.272	ENSMOCG00000003691	Tarbp2	96	67.898	Microtus_ochrogaster
ENSONIG00000005115	tarbp2	95	85.756	ENSMMOG00000010374	tarbp2	100	85.756	Mola_mola
ENSONIG00000005115	tarbp2	96	88.218	ENSMALG00000009773	tarbp2	95	88.218	Monopterus_albus
ENSONIG00000005115	tarbp2	97	66.572	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSONIG00000005115	tarbp2	97	66.572	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSONIG00000005115	tarbp2	97	66.289	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSONIG00000005115	tarbp2	97	66.572	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSONIG00000005115	tarbp2	97	68.555	ENSMPUG00000005944	TARBP2	96	68.182	Mustela_putorius_furo
ENSONIG00000005115	tarbp2	97	68.750	ENSMLUG00000010035	TARBP2	96	69.602	Myotis_lucifugus
ENSONIG00000005115	tarbp2	97	67.705	ENSNLEG00000017690	TARBP2	75	91.525	Nomascus_leucogenys
ENSONIG00000005115	tarbp2	94	72.698	ENSMEUG00000001916	TARBP2	95	72.611	Notamacropus_eugenii
ENSONIG00000005115	tarbp2	67	68.444	ENSOPRG00000011397	TARBP2	100	70.667	Ochotona_princeps
ENSONIG00000005115	tarbp2	63	69.737	ENSODEG00000013413	TARBP2	100	70.044	Octodon_degus
ENSONIG00000005115	tarbp2	97	69.122	ENSOCUG00000005700	TARBP2	96	68.750	Oryctolagus_cuniculus
ENSONIG00000005115	tarbp2	96	86.494	ENSORLG00000005209	tarbp2	95	86.494	Oryzias_latipes
ENSONIG00000005115	tarbp2	96	86.207	ENSORLG00020017755	tarbp2	95	86.207	Oryzias_latipes_hni
ENSONIG00000005115	tarbp2	96	86.494	ENSORLG00015013237	tarbp2	95	86.494	Oryzias_latipes_hsok
ENSONIG00000005115	tarbp2	96	86.207	ENSOMEG00000018860	tarbp2	95	86.207	Oryzias_melastigma
ENSONIG00000005115	tarbp2	97	67.135	ENSOGAG00000001744	TARBP2	96	68.466	Otolemur_garnettii
ENSONIG00000005115	tarbp2	97	67.422	ENSOARG00000016437	TARBP2	96	68.750	Ovis_aries
ENSONIG00000005115	tarbp2	97	67.705	ENSPPAG00000030429	TARBP2	75	91.525	Pan_paniscus
ENSONIG00000005115	tarbp2	97	68.555	ENSPPRG00000000189	TARBP2	96	69.034	Panthera_pardus
ENSONIG00000005115	tarbp2	97	67.989	ENSPTIG00000007859	TARBP2	96	67.422	Panthera_tigris_altaica
ENSONIG00000005115	tarbp2	97	67.705	ENSPTRG00000005020	TARBP2	75	91.525	Pan_troglodytes
ENSONIG00000005115	tarbp2	97	67.422	ENSPANG00000010689	TARBP2	75	91.525	Papio_anubis
ENSONIG00000005115	tarbp2	98	73.521	ENSPKIG00000002455	tarbp2	95	75.988	Paramormyrops_kingsleyae
ENSONIG00000005115	tarbp2	96	85.632	ENSPMGG00000006497	tarbp2	95	85.632	Periophthalmus_magnuspinnatus
ENSONIG00000005115	tarbp2	97	67.422	ENSPEMG00000014285	Tarbp2	96	67.045	Peromyscus_maniculatus_bairdii
ENSONIG00000005115	tarbp2	91	68.056	ENSPMAG00000000105	tarbp2	99	68.056	Petromyzon_marinus
ENSONIG00000005115	tarbp2	94	72.698	ENSPCIG00000006672	TARBP2	87	72.611	Phascolarctos_cinereus
ENSONIG00000005115	tarbp2	96	86.494	ENSPFOG00000007586	tarbp2	95	86.494	Poecilia_formosa
ENSONIG00000005115	tarbp2	96	85.920	ENSPLAG00000017659	tarbp2	95	85.920	Poecilia_latipinna
ENSONIG00000005115	tarbp2	96	86.494	ENSPMEG00000007775	tarbp2	95	86.494	Poecilia_mexicana
ENSONIG00000005115	tarbp2	96	85.920	ENSPREG00000007815	tarbp2	95	85.920	Poecilia_reticulata
ENSONIG00000005115	tarbp2	97	63.739	ENSPPYG00000004583	TARBP2	95	66.563	Pongo_abelii
ENSONIG00000005115	tarbp2	80	63.823	ENSPCAG00000005352	TARBP2	69	65.613	Procavia_capensis
ENSONIG00000005115	tarbp2	97	67.422	ENSPCOG00000013102	TARBP2	75	91.525	Propithecus_coquereli
ENSONIG00000005115	tarbp2	97	67.422	ENSPVAG00000012286	TARBP2	96	67.045	Pteropus_vampyrus
ENSONIG00000005115	tarbp2	96	93.391	ENSPNYG00000014125	tarbp2	95	93.391	Pundamilia_nyererei
ENSONIG00000005115	tarbp2	96	79.656	ENSPNAG00000011128	tarbp2	95	80.516	Pygocentrus_nattereri
ENSONIG00000005115	tarbp2	97	66.289	ENSRNOG00000042355	Tarbp2	96	67.330	Rattus_norvegicus
ENSONIG00000005115	tarbp2	97	67.422	ENSRBIG00000027150	TARBP2	75	91.525	Rhinopithecus_bieti
ENSONIG00000005115	tarbp2	97	67.422	ENSRROG00000044783	TARBP2	100	67.630	Rhinopithecus_roxellana
ENSONIG00000005115	tarbp2	97	66.856	ENSSBOG00000027305	TARBP2	75	91.525	Saimiri_boliviensis_boliviensis
ENSONIG00000005115	tarbp2	97	69.688	ENSSHAG00000007064	TARBP2	100	72.347	Sarcophilus_harrisii
ENSONIG00000005115	tarbp2	96	78.448	ENSSFOG00015010784	tarbp2	95	78.448	Scleropages_formosus
ENSONIG00000005115	tarbp2	96	89.368	ENSSMAG00000012769	tarbp2	99	86.704	Scophthalmus_maximus
ENSONIG00000005115	tarbp2	96	90.230	ENSSDUG00000018818	tarbp2	95	90.230	Seriola_dumerili
ENSONIG00000005115	tarbp2	96	90.230	ENSSLDG00000001835	tarbp2	95	90.230	Seriola_lalandi_dorsalis
ENSONIG00000005115	tarbp2	74	76.087	ENSSARG00000001010	TARBP2	68	81.395	Sorex_araneus
ENSONIG00000005115	tarbp2	60	89.474	ENSSPUG00000005895	TARBP2	67	88.136	Sphenodon_punctatus
ENSONIG00000005115	tarbp2	96	89.943	ENSSPAG00000022797	tarbp2	95	89.943	Stegastes_partitus
ENSONIG00000005115	tarbp2	97	68.555	ENSSSCG00000000276	TARBP2	100	68.786	Sus_scrofa
ENSONIG00000005115	tarbp2	73	52.899	ENSTGUG00000017031	TARBP2	99	54.902	Taeniopygia_guttata
ENSONIG00000005115	tarbp2	96	86.207	ENSTRUG00000014379	tarbp2	95	86.207	Takifugu_rubripes
ENSONIG00000005115	tarbp2	96	85.920	ENSTNIG00000007065	tarbp2	95	85.920	Tetraodon_nigroviridis
ENSONIG00000005115	tarbp2	97	68.555	ENSTTRG00000017177	TARBP2	96	69.034	Tursiops_truncatus
ENSONIG00000005115	tarbp2	97	68.555	ENSUAMG00000009011	TARBP2	96	69.034	Ursus_americanus
ENSONIG00000005115	tarbp2	95	68.391	ENSUMAG00000010461	TARBP2	95	68.876	Ursus_maritimus
ENSONIG00000005115	tarbp2	97	67.989	ENSVVUG00000028150	TARBP2	100	68.208	Vulpes_vulpes
ENSONIG00000005115	tarbp2	96	67.989	ENSXETG00000012644	tarbp2	95	68.060	Xenopus_tropicalis
ENSONIG00000005115	tarbp2	96	86.494	ENSXMAG00000017836	tarbp2	95	86.494	Xiphophorus_maculatus