EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005156 (Gene tree)
Gene ID: 102075847
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10529 bases
Position: chrGL831217.1:443899-454427
Accession: 102075847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006480	MMR_HSR1	PF01926.23	5.6e-06	1	1
ENSONIP00000006479	MMR_HSR1	PF01926.23	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006484	-	3905	-	ENSONIP00000006479	788 (aa)	XP_005454944	I3JC89
ENSONIT00000006485	-	1821	-	ENSONIP00000006480	607 (aa)	-	I3JC90

Gene Model

Click here to download ENSONIG00000005156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005156	-	100	48.044	ENSONIG00000015367	-	99	47.887
ENSONIG00000005156	-	100	50.000	ENSONIG00000012332	-	100	49.842
ENSONIG00000005156	-	100	78.990	ENSONIG00000017112	-	100	77.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005156	-	100	31.111	ENSG00000189233	NUGGC	77	30.635	Homo_sapiens
ENSONIG00000005156	-	100	56.393	ENSAPEG00000007405	-	99	55.934	Amphiprion_percula
ENSONIG00000005156	-	100	56.209	ENSAPEG00000008962	-	99	55.556	Amphiprion_percula
ENSONIG00000005156	-	81	56.693	ENSAPEG00000007463	-	99	54.985	Amphiprion_percula
ENSONIG00000005156	-	99	57.774	ENSATEG00000024350	-	98	57.553	Anabas_testudineus
ENSONIG00000005156	-	99	59.046	ENSACLG00000027743	-	96	56.890	Astatotilapia_calliptera
ENSONIG00000005156	-	99	53.443	ENSACLG00000027749	-	99	54.873	Astatotilapia_calliptera
ENSONIG00000005156	-	99	57.964	ENSACLG00000027770	-	94	57.799	Astatotilapia_calliptera
ENSONIG00000005156	-	99	57.307	ENSACLG00000027781	-	96	55.781	Astatotilapia_calliptera
ENSONIG00000005156	-	93	78.369	ENSACLG00000027785	-	99	78.333	Astatotilapia_calliptera
ENSONIG00000005156	-	72	75.688	ENSACLG00000009378	-	96	76.907	Astatotilapia_calliptera
ENSONIG00000005156	-	99	57.353	ENSACLG00000027763	-	99	54.894	Astatotilapia_calliptera
ENSONIG00000005156	-	99	39.246	ENSAMXG00000035650	-	99	37.063	Astyanax_mexicanus
ENSONIG00000005156	-	99	38.208	ENSAMXG00000007315	-	96	35.772	Astyanax_mexicanus
ENSONIG00000005156	-	100	31.587	ENSCJAG00000015456	NUGGC	79	30.031	Callithrix_jacchus
ENSONIG00000005156	-	100	31.111	ENSCATG00000011556	NUGGC	77	30.635	Cercocebus_atys
ENSONIG00000005156	-	100	30.428	ENSCGRG00001024841	Nuggc	78	30.032	Cricetulus_griseus_chok1gshd
ENSONIG00000005156	-	100	30.428	ENSCGRG00000012434	Nuggc	78	30.032	Cricetulus_griseus_crigri
ENSONIG00000005156	-	100	30.394	ENSEASG00005016323	NUGGC	80	30.269	Equus_asinus_asinus
ENSONIG00000005156	-	100	30.599	ENSECAG00000014074	NUGGC	78	30.126	Equus_caballus
ENSONIG00000005156	-	100	43.089	ENSELUG00000016154	-	77	43.272	Esox_lucius
ENSONIG00000005156	-	100	43.062	ENSELUG00000016324	-	97	39.854	Esox_lucius
ENSONIG00000005156	-	100	44.516	ENSELUG00000016238	-	83	38.766	Esox_lucius
ENSONIG00000005156	-	79	51.107	ENSGACG00000011412	-	100	50.781	Gasterosteus_aculeatus
ENSONIG00000005156	-	100	48.352	ENSLBEG00000027088	-	99	48.958	Labrus_bergylta
ENSONIG00000005156	-	91	56.115	ENSLBEG00000025738	-	97	57.143	Labrus_bergylta
ENSONIG00000005156	-	100	34.720	ENSLOCG00000002868	-	98	34.175	Lepisosteus_oculatus
ENSONIG00000005156	-	100	30.952	ENSMFAG00000043857	NUGGC	77	30.476	Macaca_fascicularis
ENSONIG00000005156	-	100	30.952	ENSMMUG00000001040	NUGGC	77	30.476	Macaca_mulatta
ENSONIG00000005156	-	100	30.952	ENSMNEG00000045452	NUGGC	77	30.476	Macaca_nemestrina
ENSONIG00000005156	-	83	54.211	ENSMAMG00000023343	-	62	60.108	Mastacembelus_armatus
ENSONIG00000005156	-	100	78.982	ENSMZEG00005026592	-	100	80.816	Maylandia_zebra
ENSONIG00000005156	-	100	78.618	ENSMZEG00005023437	-	100	80.787	Maylandia_zebra
ENSONIG00000005156	-	99	57.800	ENSMZEG00005023434	-	85	57.917	Maylandia_zebra
ENSONIG00000005156	-	100	57.869	ENSMZEG00005004230	-	96	55.597	Maylandia_zebra
ENSONIG00000005156	-	100	76.606	ENSMZEG00005004202	-	99	76.901	Maylandia_zebra
ENSONIG00000005156	-	99	59.704	ENSMZEG00005023374	-	94	59.833	Maylandia_zebra
ENSONIG00000005156	-	99	54.262	ENSMZEG00005023384	-	99	54.161	Maylandia_zebra
ENSONIG00000005156	-	88	31.915	ENSMAUG00000014486	Nuggc	74	31.915	Mesocricetus_auratus
ENSONIG00000005156	-	100	30.476	ENSMPUG00000000959	NUGGC	77	30.063	Mustela_putorius_furo
ENSONIG00000005156	-	100	30.573	ENSOCUG00000000032	NUGGC	78	30.476	Oryctolagus_cuniculus
ENSONIG00000005156	-	100	30.612	ENSOGAG00000000229	NUGGC	79	30.174	Otolemur_garnettii
ENSONIG00000005156	-	99	53.846	ENSPFOG00000006073	-	99	50.433	Poecilia_formosa
ENSONIG00000005156	-	99	53.883	ENSPLAG00000016480	-	99	50.432	Poecilia_latipinna
ENSONIG00000005156	-	99	53.150	ENSPMEG00000014636	-	99	53.096	Poecilia_mexicana
ENSONIG00000005156	-	80	56.823	ENSPREG00000009634	-	100	53.488	Poecilia_reticulata
ENSONIG00000005156	-	87	57.736	ENSPREG00000007347	-	97	57.989	Poecilia_reticulata
ENSONIG00000005156	-	99	55.267	ENSPNYG00000002532	-	99	53.203	Pundamilia_nyererei
ENSONIG00000005156	-	99	38.254	ENSPNAG00000003204	-	92	36.115	Pygocentrus_nattereri
ENSONIG00000005156	-	89	47.458	ENSRBIG00000043902	NUGGC	82	47.458	Rhinopithecus_bieti
ENSONIG00000005156	-	89	47.458	ENSSBOG00000028930	NUGGC	76	47.458	Saimiri_boliviensis_boliviensis
ENSONIG00000005156	-	100	32.767	ENSSFOG00015023994	-	84	31.382	Scleropages_formosus
ENSONIG00000005156	-	100	55.537	ENSSMAG00000015947	nuggc.3	99	52.848	Scophthalmus_maximus
ENSONIG00000005156	-	72	55.699	ENSSDUG00000010293	-	99	53.698	Seriola_dumerili
ENSONIG00000005156	-	100	58.293	ENSSPAG00000014020	-	99	56.145	Stegastes_partitus
ENSONIG00000005156	-	100	50.855	ENSSPAG00000013498	-	98	51.802	Stegastes_partitus