EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005192 (Gene tree)
Gene ID: 100704173
Gene Symbol: srl
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 14827 bases
Position: chrGL831217.1:774352-789178
Accession: 100704173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006523	MMR_HSR1	PF01926.23	1.5e-08	1	1
ENSONIP00000006524	MMR_HSR1	PF01926.23	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006529	-	1416	-	ENSONIP00000006524	471 (aa)	-	I3JCD4
ENSONIT00000006528	-	4481	-	ENSONIP00000006523	482 (aa)	XP_003450107	I3JCD3

Gene Model

Click here to download ENSONIG00000005192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005192	srl	83	31.795	ENSONIG00000005277	si:ch211-114c17.1	70	31.795
ENSONIG00000005192	srl	87	32.297	ENSONIG00000004051	ehd2b	74	32.297
ENSONIG00000005192	srl	79	32.976	ENSONIG00000000693	ehd3	70	33.333
ENSONIG00000005192	srl	96	76.718	ENSONIG00000016337	SRL	76	76.718
ENSONIG00000005192	srl	87	31.068	ENSONIG00000005597	-	73	31.068
ENSONIG00000005192	srl	85	32.506	ENSONIG00000001849	ehd4	71	32.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005192	srl	96	81.579	ENSG00000185739	SRL	99	83.488	Homo_sapiens
ENSONIG00000005192	srl	100	94.410	ENSAPOG00000018093	srl	99	97.052	Acanthochromis_polyacanthus
ENSONIG00000005192	srl	94	77.201	ENSAPOG00000012432	SRL	99	77.201	Acanthochromis_polyacanthus
ENSONIG00000005192	srl	99	79.449	ENSAMEG00000010862	SRL	53	79.449	Ailuropoda_melanoleuca
ENSONIG00000005192	srl	95	75.670	ENSACIG00000015419	SRL	99	75.670	Amphilophus_citrinellus
ENSONIG00000005192	srl	96	98.448	ENSACIG00000015799	srl	100	98.448	Amphilophus_citrinellus
ENSONIG00000005192	srl	97	75.599	ENSAOCG00000017049	SRL	99	75.817	Amphiprion_ocellaris
ENSONIG00000005192	srl	92	97.465	ENSAOCG00000007574	srl	100	97.465	Amphiprion_ocellaris
ENSONIG00000005192	srl	97	72.489	ENSAPEG00000006533	SRL	99	72.985	Amphiprion_percula
ENSONIG00000005192	srl	100	97.101	ENSAPEG00000006911	srl	100	97.101	Amphiprion_percula
ENSONIG00000005192	srl	95	76.139	ENSATEG00000009643	SRL	53	76.356	Anabas_testudineus
ENSONIG00000005192	srl	100	96.687	ENSATEG00000024315	srl	100	96.687	Anabas_testudineus
ENSONIG00000005192	srl	94	84.547	ENSACAG00000016380	SRL	89	81.148	Anolis_carolinensis
ENSONIG00000005192	srl	96	74.624	ENSACLG00000024674	SRL	58	74.624	Astatotilapia_calliptera
ENSONIG00000005192	srl	100	99.585	ENSACLG00000027685	srl	100	99.585	Astatotilapia_calliptera
ENSONIG00000005192	srl	92	75.463	ENSAMXG00000038693	SRL	100	74.393	Astyanax_mexicanus
ENSONIG00000005192	srl	99	92.100	ENSAMXG00000018789	srl	92	92.100	Astyanax_mexicanus
ENSONIG00000005192	srl	96	82.198	ENSBTAG00000001078	SRL	58	82.198	Bos_taurus
ENSONIG00000005192	srl	94	83.032	ENSCJAG00000019750	SRL	100	79.493	Callithrix_jacchus
ENSONIG00000005192	srl	96	81.236	ENSCAFG00000019233	SRL	84	81.236	Canis_familiaris
ENSONIG00000005192	srl	96	81.236	ENSCAFG00020025024	SRL	56	81.236	Canis_lupus_dingo
ENSONIG00000005192	srl	97	82.057	ENSCHIG00000017927	SRL	57	82.159	Capra_hircus
ENSONIG00000005192	srl	100	80.127	ENSTSYG00000007919	SRL	99	83.721	Carlito_syrichta
ENSONIG00000005192	srl	96	82.522	ENSCPOG00000012643	SRL	97	81.917	Cavia_porcellus
ENSONIG00000005192	srl	94	77.602	ENSCCAG00000032646	SRL	100	84.433	Cebus_capucinus
ENSONIG00000005192	srl	97	81.004	ENSCATG00000032227	-	100	79.704	Cercocebus_atys
ENSONIG00000005192	srl	96	82.743	ENSCLAG00000016242	SRL	97	82.135	Chinchilla_lanigera
ENSONIG00000005192	srl	82	86.234	ENSCHOG00000001618	SRL	52	86.234	Choloepus_hoffmanni
ENSONIG00000005192	srl	96	85.751	ENSCPBG00000026371	SRL	99	81.799	Chrysemys_picta_bellii
ENSONIG00000005192	srl	89	60.514	ENSCING00000005231	-	93	61.151	Ciona_intestinalis
ENSONIG00000005192	srl	96	82.000	ENSCANG00000035872	SRL	99	83.488	Colobus_angolensis_palliatus
ENSONIG00000005192	srl	96	82.965	ENSCGRG00001016630	Srl	99	80.892	Cricetulus_griseus_chok1gshd
ENSONIG00000005192	srl	96	82.965	ENSCGRG00000005458	Srl	99	80.892	Cricetulus_griseus_crigri
ENSONIG00000005192	srl	100	96.066	ENSCSEG00000016151	srl	100	96.066	Cynoglossus_semilaevis
ENSONIG00000005192	srl	99	72.766	ENSCSEG00000011866	SRL	94	72.979	Cynoglossus_semilaevis
ENSONIG00000005192	srl	100	92.946	ENSCVAG00000003513	srl	100	94.410	Cyprinodon_variegatus
ENSONIG00000005192	srl	96	76.304	ENSCVAG00000022465	SRL	61	76.304	Cyprinodon_variegatus
ENSONIG00000005192	srl	80	78.646	ENSDARG00000112959	CABZ01072309.1	100	78.646	Danio_rerio
ENSONIG00000005192	srl	100	91.286	ENSDARG00000104587	srl	100	91.286	Danio_rerio
ENSONIG00000005192	srl	95	82.889	ENSDNOG00000011643	SRL	55	82.237	Dasypus_novemcinctus
ENSONIG00000005192	srl	96	82.237	ENSDORG00000014807	Srl	97	82.353	Dipodomys_ordii
ENSONIG00000005192	srl	79	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSONIG00000005192	srl	95	82.405	ENSEASG00005000942	SRL	55	81.758	Equus_asinus_asinus
ENSONIG00000005192	srl	99	80.085	ENSECAG00000024219	SRL	99	80.085	Equus_caballus
ENSONIG00000005192	srl	100	87.474	ENSELUG00000015616	srl	100	87.474	Esox_lucius
ENSONIG00000005192	srl	99	77.987	ENSFCAG00000022075	SRL	100	79.281	Felis_catus
ENSONIG00000005192	srl	93	83.409	ENSFALG00000004328	SRL	63	83.409	Ficedula_albicollis
ENSONIG00000005192	srl	96	82.965	ENSFDAG00000006199	SRL	98	81.996	Fukomys_damarensis
ENSONIG00000005192	srl	100	94.617	ENSFHEG00000011239	srl	100	94.617	Fundulus_heteroclitus
ENSONIG00000005192	srl	95	76.906	ENSFHEG00000011854	SRL	99	77.130	Fundulus_heteroclitus
ENSONIG00000005192	srl	94	91.850	ENSGMOG00000014954	srl	100	91.850	Gadus_morhua
ENSONIG00000005192	srl	99	80.892	ENSGALG00000038884	SRL	99	80.892	Gallus_gallus
ENSONIG00000005192	srl	100	94.824	ENSGAFG00000000010	srl	100	94.824	Gambusia_affinis
ENSONIG00000005192	srl	95	77.951	ENSGAFG00000016984	SRL	100	77.951	Gambusia_affinis
ENSONIG00000005192	srl	94	96.703	ENSGACG00000011332	srl	100	96.703	Gasterosteus_aculeatus
ENSONIG00000005192	srl	99	79.487	ENSGGOG00000011312	-	100	79.493	Gorilla_gorilla
ENSONIG00000005192	srl	100	99.585	ENSHBUG00000007581	srl	100	99.585	Haplochromis_burtoni
ENSONIG00000005192	srl	96	75.216	ENSHBUG00000015710	SRL	58	75.216	Haplochromis_burtoni
ENSONIG00000005192	srl	96	82.743	ENSHGLG00000015271	SRL	97	82.135	Heterocephalus_glaber_female
ENSONIG00000005192	srl	96	82.743	ENSHGLG00100019378	SRL	97	82.135	Heterocephalus_glaber_male
ENSONIG00000005192	srl	94	75.604	ENSHCOG00000001012	SRL	50	75.604	Hippocampus_comes
ENSONIG00000005192	srl	100	95.041	ENSHCOG00000008687	srl	99	96.429	Hippocampus_comes
ENSONIG00000005192	srl	93	69.954	ENSIPUG00000011609	SRL	95	69.954	Ictalurus_punctatus
ENSONIG00000005192	srl	100	90.890	ENSIPUG00000012513	srl	100	90.890	Ictalurus_punctatus
ENSONIG00000005192	srl	96	82.522	ENSSTOG00000021151	-	97	81.917	Ictidomys_tridecemlineatus
ENSONIG00000005192	srl	99	81.104	ENSJJAG00000016400	Srl	99	81.104	Jaculus_jaculus
ENSONIG00000005192	srl	98	94.503	ENSKMAG00000014115	srl	95	94.503	Kryptolebias_marmoratus
ENSONIG00000005192	srl	94	77.324	ENSKMAG00000019537	SRL	100	77.324	Kryptolebias_marmoratus
ENSONIG00000005192	srl	97	73.856	ENSLBEG00000013811	SRL	99	74.074	Labrus_bergylta
ENSONIG00000005192	srl	100	95.445	ENSLBEG00000026643	srl	100	95.445	Labrus_bergylta
ENSONIG00000005192	srl	100	83.023	ENSLACG00000002825	SRL	100	84.071	Latimeria_chalumnae
ENSONIG00000005192	srl	97	88.286	ENSLOCG00000002644	srl	98	88.286	Lepisosteus_oculatus
ENSONIG00000005192	srl	96	81.758	ENSLAFG00000006329	SRL	52	81.758	Loxodonta_africana
ENSONIG00000005192	srl	91	83.488	ENSMFAG00000037383	SRL	99	83.488	Macaca_fascicularis
ENSONIG00000005192	srl	99	79.487	ENSMNEG00000019236	-	97	80.870	Macaca_nemestrina
ENSONIG00000005192	srl	96	75.111	ENSMLEG00000032156	SRL	100	73.150	Mandrillus_leucophaeus
ENSONIG00000005192	srl	94	76.432	ENSMAMG00000013756	SRL	53	76.432	Mastacembelus_armatus
ENSONIG00000005192	srl	96	96.896	ENSMAMG00000023322	srl	96	96.896	Mastacembelus_armatus
ENSONIG00000005192	srl	100	99.585	ENSMZEG00005004548	srl	100	99.585	Maylandia_zebra
ENSONIG00000005192	srl	96	75.000	ENSMZEG00005004010	SRL	58	75.000	Maylandia_zebra
ENSONIG00000005192	srl	93	84.091	ENSMGAG00000009342	SRL	92	86.575	Meleagris_gallopavo
ENSONIG00000005192	srl	96	81.898	ENSMICG00000032307	SRL	100	79.704	Microcebus_murinus
ENSONIG00000005192	srl	99	80.255	ENSMOCG00000008208	Srl	99	80.255	Microtus_ochrogaster
ENSONIG00000005192	srl	94	74.945	ENSMMOG00000021572	SRL	99	74.945	Mola_mola
ENSONIG00000005192	srl	96	96.000	ENSMMOG00000013970	srl	100	96.000	Mola_mola
ENSONIG00000005192	srl	96	82.927	ENSMODG00000016380	-	51	82.927	Monodelphis_domestica
ENSONIG00000005192	srl	100	92.754	ENSMALG00000005039	srl	99	95.787	Monopterus_albus
ENSONIG00000005192	srl	89	78.043	ENSMALG00000000670	SRL	98	78.043	Monopterus_albus
ENSONIG00000005192	srl	96	83.407	MGP_CAROLIEiJ_G0020400	Srl	97	82.789	Mus_caroli
ENSONIG00000005192	srl	96	83.407	ENSMUSG00000022519	Srl	97	82.789	Mus_musculus
ENSONIG00000005192	srl	94	84.389	MGP_PahariEiJ_G0016108	Srl	50	82.096	Mus_pahari
ENSONIG00000005192	srl	96	83.407	MGP_SPRETEiJ_G0021294	Srl	97	82.789	Mus_spretus
ENSONIG00000005192	srl	96	81.140	ENSMPUG00000015025	SRL	55	81.140	Mustela_putorius_furo
ENSONIG00000005192	srl	96	82.340	ENSMLUG00000030733	SRL	57	82.340	Myotis_lucifugus
ENSONIG00000005192	srl	96	83.186	ENSNGAG00000019741	Srl	97	82.571	Nannospalax_galili
ENSONIG00000005192	srl	96	74.569	ENSNBRG00000002422	SRL	56	76.620	Neolamprologus_brichardi
ENSONIG00000005192	srl	100	96.680	ENSNBRG00000023775	srl	100	96.680	Neolamprologus_brichardi
ENSONIG00000005192	srl	96	76.096	ENSNLEG00000029051	SRL	100	74.207	Nomascus_leucogenys
ENSONIG00000005192	srl	96	76.159	ENSOPRG00000000477	-	53	76.159	Ochotona_princeps
ENSONIG00000005192	srl	94	84.163	ENSODEG00000013256	SRL	97	82.135	Octodon_degus
ENSONIG00000005192	srl	96	81.898	ENSOCUG00000025140	SRL	50	81.898	Oryctolagus_cuniculus
ENSONIG00000005192	srl	100	95.643	ENSORLG00000008291	srl	97	96.687	Oryzias_latipes
ENSONIG00000005192	srl	94	74.775	ENSORLG00000015064	SRL	97	74.775	Oryzias_latipes
ENSONIG00000005192	srl	94	75.000	ENSORLG00020018173	SRL	97	75.000	Oryzias_latipes_hni
ENSONIG00000005192	srl	100	97.101	ENSORLG00020019784	srl	85	97.101	Oryzias_latipes_hni
ENSONIG00000005192	srl	100	95.643	ENSORLG00015009342	srl	97	96.687	Oryzias_latipes_hsok
ENSONIG00000005192	srl	94	75.169	ENSORLG00015019063	SRL	97	75.169	Oryzias_latipes_hsok
ENSONIG00000005192	srl	100	95.436	ENSOMEG00000010006	srl	100	96.480	Oryzias_melastigma
ENSONIG00000005192	srl	94	73.684	ENSOMEG00000005682	SRL	53	73.961	Oryzias_melastigma
ENSONIG00000005192	srl	96	81.678	ENSOGAG00000029266	SRL	55	81.678	Otolemur_garnettii
ENSONIG00000005192	srl	97	82.057	ENSOARG00000003074	SRL	57	82.057	Ovis_aries
ENSONIG00000005192	srl	99	79.487	ENSPPAG00000024919	-	99	83.488	Pan_paniscus
ENSONIG00000005192	srl	99	77.987	ENSPPRG00000010274	SRL	99	82.791	Panthera_pardus
ENSONIG00000005192	srl	99	77.987	ENSPTIG00000015162	SRL	99	82.791	Panthera_tigris_altaica
ENSONIG00000005192	srl	99	79.487	ENSPTRG00000007712	SRL	99	83.488	Pan_troglodytes
ENSONIG00000005192	srl	97	81.046	ENSPANG00000013804	SRL	99	80.870	Papio_anubis
ENSONIG00000005192	srl	99	77.660	ENSPKIG00000024974	SRL	94	77.660	Paramormyrops_kingsleyae
ENSONIG00000005192	srl	100	90.103	ENSPKIG00000006405	srl	100	90.103	Paramormyrops_kingsleyae
ENSONIG00000005192	srl	97	80.828	ENSPSIG00000008586	SRL	51	81.004	Pelodiscus_sinensis
ENSONIG00000005192	srl	94	75.621	ENSPMGG00000023505	-	100	75.621	Periophthalmus_magnuspinnatus
ENSONIG00000005192	srl	97	93.450	ENSPMGG00000021081	srl	99	93.450	Periophthalmus_magnuspinnatus
ENSONIG00000005192	srl	96	82.522	ENSPEMG00000015842	Srl	99	80.255	Peromyscus_maniculatus_bairdii
ENSONIG00000005192	srl	90	68.650	ENSPMAG00000004786	srl	99	68.650	Petromyzon_marinus
ENSONIG00000005192	srl	96	82.483	ENSPCIG00000012128	SRL	99	82.483	Phascolarctos_cinereus
ENSONIG00000005192	srl	100	95.031	ENSPFOG00000011408	srl	98	93.291	Poecilia_formosa
ENSONIG00000005192	srl	95	76.615	ENSPLAG00000002932	SRL	100	76.615	Poecilia_latipinna
ENSONIG00000005192	srl	97	94.105	ENSPLAG00000008017	srl	99	94.105	Poecilia_latipinna
ENSONIG00000005192	srl	96	75.162	ENSPMEG00000005890	SRL	61	74.730	Poecilia_mexicana
ENSONIG00000005192	srl	100	92.547	ENSPMEG00000006745	srl	99	94.105	Poecilia_mexicana
ENSONIG00000005192	srl	95	77.728	ENSPREG00000000315	SRL	100	77.728	Poecilia_reticulata
ENSONIG00000005192	srl	100	95.031	ENSPREG00000007751	srl	99	95.778	Poecilia_reticulata
ENSONIG00000005192	srl	89	84.964	ENSPPYG00000007053	SRL	98	84.964	Pongo_abelii
ENSONIG00000005192	srl	96	82.522	ENSPCAG00000003378	-	51	82.522	Procavia_capensis
ENSONIG00000005192	srl	96	82.018	ENSPCOG00000023135	SRL	99	83.953	Propithecus_coquereli
ENSONIG00000005192	srl	96	81.938	ENSPVAG00000006586	SRL	56	81.938	Pteropus_vampyrus
ENSONIG00000005192	srl	96	75.000	ENSPNYG00000003423	SRL	58	75.000	Pundamilia_nyererei
ENSONIG00000005192	srl	100	99.378	ENSPNYG00000001200	srl	100	99.378	Pundamilia_nyererei
ENSONIG00000005192	srl	100	91.286	ENSPNAG00000023106	srl	100	91.286	Pygocentrus_nattereri
ENSONIG00000005192	srl	94	76.644	ENSPNAG00000007361	-	91	76.644	Pygocentrus_nattereri
ENSONIG00000005192	srl	96	82.781	ENSRNOG00000005269	Srl	50	82.781	Rattus_norvegicus
ENSONIG00000005192	srl	99	79.487	ENSRBIG00000042358	SRL	51	81.004	Rhinopithecus_bieti
ENSONIG00000005192	srl	94	83.032	ENSSBOG00000029273	SRL	100	79.493	Saimiri_boliviensis_boliviensis
ENSONIG00000005192	srl	96	82.927	ENSSHAG00000011715	-	51	82.927	Sarcophilus_harrisii
ENSONIG00000005192	srl	95	77.803	ENSSFOG00015021327	SRL	50	77.679	Scleropages_formosus
ENSONIG00000005192	srl	100	91.529	ENSSFOG00015009773	srl	100	91.529	Scleropages_formosus
ENSONIG00000005192	srl	94	74.945	ENSSMAG00000002232	SRL	50	74.945	Scophthalmus_maximus
ENSONIG00000005192	srl	100	95.859	ENSSMAG00000016274	srl	100	95.859	Scophthalmus_maximus
ENSONIG00000005192	srl	95	96.861	ENSSDUG00000010808	srl	98	96.861	Seriola_dumerili
ENSONIG00000005192	srl	94	77.333	ENSSDUG00000009161	SRL	99	77.333	Seriola_dumerili
ENSONIG00000005192	srl	100	94.813	ENSSLDG00000022024	srl	100	96.273	Seriola_lalandi_dorsalis
ENSONIG00000005192	srl	94	77.074	ENSSLDG00000014601	SRL	100	77.632	Seriola_lalandi_dorsalis
ENSONIG00000005192	srl	95	81.778	ENSSPUG00000016859	SRL	99	81.778	Sphenodon_punctatus
ENSONIG00000005192	srl	94	78.685	ENSSPAG00000014254	SRL	98	78.685	Stegastes_partitus
ENSONIG00000005192	srl	100	97.314	ENSSPAG00000019105	srl	100	97.314	Stegastes_partitus
ENSONIG00000005192	srl	96	81.758	ENSSSCG00000007949	SRL	98	82.993	Sus_scrofa
ENSONIG00000005192	srl	77	86.188	ENSTGUG00000016121	-	100	86.188	Taeniopygia_guttata
ENSONIG00000005192	srl	93	83.636	ENSTGUG00000003951	-	97	83.636	Taeniopygia_guttata
ENSONIG00000005192	srl	100	95.652	ENSTRUG00000006005	srl	100	95.652	Takifugu_rubripes
ENSONIG00000005192	srl	89	78.043	ENSTRUG00000013310	SRL	55	78.043	Takifugu_rubripes
ENSONIG00000005192	srl	100	92.754	ENSTNIG00000009739	srl	100	92.754	Tetraodon_nigroviridis
ENSONIG00000005192	srl	96	81.637	ENSUAMG00000005701	SRL	56	81.637	Ursus_americanus
ENSONIG00000005192	srl	96	81.637	ENSUMAG00000002574	SRL	56	81.637	Ursus_maritimus
ENSONIG00000005192	srl	96	80.921	ENSVVUG00000016331	-	50	80.921	Vulpes_vulpes
ENSONIG00000005192	srl	98	80.000	ENSXETG00000017313	srl	99	81.920	Xenopus_tropicalis
ENSONIG00000005192	srl	96	77.778	ENSXCOG00000014584	SRL	99	77.778	Xiphophorus_couchianus
ENSONIG00000005192	srl	89	95.962	ENSXCOG00000010424	srl	97	95.962	Xiphophorus_couchianus
ENSONIG00000005192	srl	96	75.431	ENSXMAG00000027598	SRL	63	75.431	Xiphophorus_maculatus
ENSONIG00000005192	srl	100	94.824	ENSXMAG00000004625	srl	95	94.824	Xiphophorus_maculatus