EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSONIG00000005277 (Gene tree)
Gene ID: 100701452
Gene Symbol: si:ch211-114c17.1
Alias: -
Full Name: si:ch211-114c17.1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 35530 bases
Position: chrGL831165.1:4036128-4071657
Accession: ZDB-GENE-140106-201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006634	MMR_HSR1	PF01926.23	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006639	-	1599	-	ENSONIP00000006634	533 (aa)	-	I3JCP4
ENSONIT00000006640	-	2288	-	ENSONIP00000006635	708 (aa)	-	I3JCP5
ENSONIT00000006641	-	2007	-	ENSONIP00000006636	668 (aa)	-	I3JCP6

Gene Model

Click here to download ENSONIG00000005277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005277	si:ch211-114c17.1	99	84.369	ENSONIG00000000693	ehd3	99	84.369
ENSONIG00000005277	si:ch211-114c17.1	75	30.751	ENSONIG00000016337	SRL	69	30.751
ENSONIG00000005277	si:ch211-114c17.1	98	70.455	ENSONIG00000004051	ehd2b	98	71.023
ENSONIG00000005277	si:ch211-114c17.1	99	58.813	ENSONIG00000005597	-	99	58.813
ENSONIG00000005277	si:ch211-114c17.1	99	74.624	ENSONIG00000001849	ehd4	97	74.624
ENSONIG00000005277	si:ch211-114c17.1	70	31.795	ENSONIG00000005192	srl	83	31.795