EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005338 (Gene tree)
Gene ID: 100689926
Gene Symbol: rnaseh2c
Alias: -
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1484 bases
Position: chrGL831165.1:4409962-4411445
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006712	RNase_H2_suC	PF08615.11	9.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006717	-	414	-	ENSONIP00000006712	137 (aa)	-	I3JCX2

Gene Model

Click here to download ENSONIG00000005338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005338	rnaseh2c	99	88.235	ENSAPOG00000012901	rnaseh2c	99	88.235	Acanthochromis_polyacanthus
ENSONIG00000005338	rnaseh2c	99	88.235	ENSACIG00000022433	rnaseh2c	100	88.235	Amphilophus_citrinellus
ENSONIG00000005338	rnaseh2c	99	87.500	ENSAOCG00000016855	rnaseh2c	100	87.500	Amphiprion_ocellaris
ENSONIG00000005338	rnaseh2c	100	88.321	ENSAPEG00000009850	rnaseh2c	100	88.235	Amphiprion_percula
ENSONIG00000005338	rnaseh2c	99	83.824	ENSATEG00000014395	rnaseh2c	100	83.824	Anabas_testudineus
ENSONIG00000005338	rnaseh2c	99	97.059	ENSACLG00000016950	rnaseh2c	100	97.059	Astatotilapia_calliptera
ENSONIG00000005338	rnaseh2c	99	63.704	ENSAMXG00000001210	rnaseh2c	100	63.704	Astyanax_mexicanus
ENSONIG00000005338	rnaseh2c	98	55.970	ENSCPBG00000023408	-	96	55.970	Chrysemys_picta_bellii
ENSONIG00000005338	rnaseh2c	99	80.882	ENSCSEG00000005808	rnaseh2c	99	80.882	Cynoglossus_semilaevis
ENSONIG00000005338	rnaseh2c	99	78.676	ENSCVAG00000006337	rnaseh2c	100	78.676	Cyprinodon_variegatus
ENSONIG00000005338	rnaseh2c	99	63.235	ENSDARG00000089637	rnaseh2c	99	63.235	Danio_rerio
ENSONIG00000005338	rnaseh2c	85	45.833	ENSEBUG00000014939	rnaseh2c	77	45.833	Eptatretus_burgeri
ENSONIG00000005338	rnaseh2c	99	68.148	ENSELUG00000007345	rnaseh2c	97	68.148	Esox_lucius
ENSONIG00000005338	rnaseh2c	95	78.462	ENSFHEG00000002419	rnaseh2c	95	78.462	Fundulus_heteroclitus
ENSONIG00000005338	rnaseh2c	66	73.333	ENSGMOG00000008727	rnaseh2c	100	73.333	Gadus_morhua
ENSONIG00000005338	rnaseh2c	100	79.562	ENSGAFG00000016755	rnaseh2c	84	79.562	Gambusia_affinis
ENSONIG00000005338	rnaseh2c	98	55.970	ENSGAGG00000008193	-	96	55.970	Gopherus_agassizii
ENSONIG00000005338	rnaseh2c	99	99.265	ENSHBUG00000012806	rnaseh2c	100	99.265	Haplochromis_burtoni
ENSONIG00000005338	rnaseh2c	99	74.265	ENSHCOG00000007177	rnaseh2c	100	74.265	Hippocampus_comes
ENSONIG00000005338	rnaseh2c	99	63.971	ENSIPUG00000018044	rnaseh2c	100	63.971	Ictalurus_punctatus
ENSONIG00000005338	rnaseh2c	99	78.676	ENSKMAG00000004184	rnaseh2c	100	78.676	Kryptolebias_marmoratus
ENSONIG00000005338	rnaseh2c	99	81.022	ENSLBEG00000005742	rnaseh2c	100	81.022	Labrus_bergylta
ENSONIG00000005338	rnaseh2c	94	57.364	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSONIG00000005338	rnaseh2c	99	80.147	ENSMAMG00000021610	rnaseh2c	100	80.147	Mastacembelus_armatus
ENSONIG00000005338	rnaseh2c	99	97.794	ENSMZEG00005004796	rnaseh2c	100	97.794	Maylandia_zebra
ENSONIG00000005338	rnaseh2c	99	82.353	ENSMMOG00000002869	rnaseh2c	100	82.353	Mola_mola
ENSONIG00000005338	rnaseh2c	99	81.752	ENSMALG00000012198	rnaseh2c	100	81.752	Monopterus_albus
ENSONIG00000005338	rnaseh2c	99	99.265	ENSNBRG00000001462	rnaseh2c	100	99.265	Neolamprologus_brichardi
ENSONIG00000005338	rnaseh2c	99	75.735	ENSORLG00000023473	rnaseh2c	100	75.735	Oryzias_latipes
ENSONIG00000005338	rnaseh2c	100	75.182	ENSORLG00020019053	rnaseh2c	92	75.182	Oryzias_latipes_hni
ENSONIG00000005338	rnaseh2c	100	75.182	ENSORLG00015017067	rnaseh2c	92	75.182	Oryzias_latipes_hsok
ENSONIG00000005338	rnaseh2c	99	75.000	ENSOMEG00000018607	rnaseh2c	100	75.000	Oryzias_melastigma
ENSONIG00000005338	rnaseh2c	99	58.824	ENSPKIG00000019331	rnaseh2c	100	58.824	Paramormyrops_kingsleyae
ENSONIG00000005338	rnaseh2c	99	75.735	ENSPFOG00000009415	rnaseh2c	100	75.735	Poecilia_formosa
ENSONIG00000005338	rnaseh2c	99	76.471	ENSPLAG00000023330	rnaseh2c	100	76.471	Poecilia_latipinna
ENSONIG00000005338	rnaseh2c	99	76.471	ENSPMEG00000003696	rnaseh2c	100	76.471	Poecilia_mexicana
ENSONIG00000005338	rnaseh2c	100	71.622	ENSPREG00000015384	rnaseh2c	73	71.622	Poecilia_reticulata
ENSONIG00000005338	rnaseh2c	99	99.265	ENSPNYG00000014766	rnaseh2c	100	99.265	Pundamilia_nyererei
ENSONIG00000005338	rnaseh2c	99	62.222	ENSPNAG00000019111	rnaseh2c	99	62.222	Pygocentrus_nattereri
ENSONIG00000005338	rnaseh2c	99	67.407	ENSSFOG00015005760	rnaseh2c	99	67.407	Scleropages_formosus
ENSONIG00000005338	rnaseh2c	99	84.559	ENSSMAG00000017738	rnaseh2c	100	84.559	Scophthalmus_maximus
ENSONIG00000005338	rnaseh2c	99	84.559	ENSSDUG00000017285	rnaseh2c	100	84.559	Seriola_dumerili
ENSONIG00000005338	rnaseh2c	99	86.029	ENSSLDG00000016030	rnaseh2c	100	86.029	Seriola_lalandi_dorsalis
ENSONIG00000005338	rnaseh2c	95	51.128	ENSSPUG00000000842	-	87	51.515	Sphenodon_punctatus
ENSONIG00000005338	rnaseh2c	99	86.029	ENSSPAG00000007536	rnaseh2c	100	86.029	Stegastes_partitus
ENSONIG00000005338	rnaseh2c	99	74.265	ENSTRUG00000021845	rnaseh2c	100	74.265	Takifugu_rubripes
ENSONIG00000005338	rnaseh2c	99	78.676	ENSTNIG00000000431	rnaseh2c	100	78.676	Tetraodon_nigroviridis
ENSONIG00000005338	rnaseh2c	98	50.746	ENSXETG00000032466	-	98	50.746	Xenopus_tropicalis
ENSONIG00000005338	rnaseh2c	99	76.471	ENSXCOG00000001611	rnaseh2c	100	76.471	Xiphophorus_couchianus
ENSONIG00000005338	rnaseh2c	100	78.832	ENSXMAG00000003147	rnaseh2c	84	78.832	Xiphophorus_maculatus