EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005422 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 6615 bases
Position: chrGL831165.1:4598428-4605042
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006811	SAP	PF02037.27	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006816	-	3781	-	ENSONIP00000006811	624 (aa)	-	I3JD71

Gene Model

Click here to download ENSONIG00000005422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005422	si:ch211-107m4.1	91	34.364	ENSONIG00000001260	hnrnpub	75	34.812
ENSONIG00000005422	si:ch211-107m4.1	91	36.817	ENSONIG00000004004	HNRNPUL1	76	36.901

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005422	si:ch211-107m4.1	81	39.612	ENSG00000214753	HNRNPUL2	91	35.131	Homo_sapiens
ENSONIG00000005422	si:ch211-107m4.1	100	69.267	ENSAPOG00000005128	si:ch211-107m4.1	97	70.476	Acanthochromis_polyacanthus
ENSONIG00000005422	si:ch211-107m4.1	97	77.100	ENSACIG00000022729	si:ch211-107m4.1	88	77.100	Amphilophus_citrinellus
ENSONIG00000005422	si:ch211-107m4.1	100	65.805	ENSAOCG00000017297	si:ch211-107m4.1	97	66.306	Amphiprion_ocellaris
ENSONIG00000005422	si:ch211-107m4.1	100	64.795	ENSAPEG00000009122	-	97	65.278	Amphiprion_percula
ENSONIG00000005422	si:ch211-107m4.1	74	41.314	ENSACAG00000000746	-	80	36.564	Anolis_carolinensis
ENSONIG00000005422	si:ch211-107m4.1	81	39.806	ENSANAG00000027153	-	91	35.465	Aotus_nancymaae
ENSONIG00000005422	si:ch211-107m4.1	100	94.240	ENSACLG00000018069	si:ch211-107m4.1	98	94.463	Astatotilapia_calliptera
ENSONIG00000005422	si:ch211-107m4.1	100	49.333	ENSAMXG00000033712	si:ch211-107m4.1	82	49.333	Astyanax_mexicanus
ENSONIG00000005422	si:ch211-107m4.1	77	41.093	ENSBTAG00000002510	HNRNPUL2	87	37.329	Bos_taurus
ENSONIG00000005422	si:ch211-107m4.1	81	39.729	ENSCJAG00000018709	-	91	35.414	Callithrix_jacchus
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSCAFG00000015686	-	91	35.901	Canis_familiaris
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSCAFG00020013120	-	91	35.901	Canis_lupus_dingo
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSCHIG00000020213	-	87	37.178	Capra_hircus
ENSONIG00000005422	si:ch211-107m4.1	81	39.335	ENSCCAG00000037674	-	91	35.036	Cebus_capucinus
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSCATG00000034588	-	91	35.371	Cercocebus_atys
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSCSAG00000006701	-	87	35.371	Chlorocebus_sabaeus
ENSONIG00000005422	si:ch211-107m4.1	70	43.665	ENSCPBG00000017963	-	84	38.415	Chrysemys_picta_bellii
ENSONIG00000005422	si:ch211-107m4.1	81	39.494	ENSCGRG00001017076	Hnrnpul2	91	35.095	Cricetulus_griseus_chok1gshd
ENSONIG00000005422	si:ch211-107m4.1	93	61.785	ENSCSEG00000005686	si:ch211-107m4.1	94	61.897	Cynoglossus_semilaevis
ENSONIG00000005422	si:ch211-107m4.1	100	62.058	ENSCVAG00000006862	si:ch211-107m4.1	97	62.362	Cyprinodon_variegatus
ENSONIG00000005422	si:ch211-107m4.1	99	43.441	ENSDARG00000056830	si:ch211-107m4.1	94	43.814	Danio_rerio
ENSONIG00000005422	si:ch211-107m4.1	81	39.612	ENSDNOG00000006508	-	91	36.099	Dasypus_novemcinctus
ENSONIG00000005422	si:ch211-107m4.1	81	39.300	ENSDORG00000008678	Hnrnpul2	91	35.337	Dipodomys_ordii
ENSONIG00000005422	si:ch211-107m4.1	77	41.093	ENSEASG00005011347	-	91	36.192	Equus_asinus_asinus
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSECAG00000020298	-	91	36.047	Equus_caballus
ENSONIG00000005422	si:ch211-107m4.1	88	72.093	ENSELUG00000008134	si:ch211-107m4.1	66	72.093	Esox_lucius
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSFCAG00000014766	-	91	36.047	Felis_catus
ENSONIG00000005422	si:ch211-107m4.1	98	64.771	ENSFHEG00000014731	si:ch211-107m4.1	100	64.771	Fundulus_heteroclitus
ENSONIG00000005422	si:ch211-107m4.1	100	64.373	ENSGAFG00000016579	si:ch211-107m4.1	97	64.992	Gambusia_affinis
ENSONIG00000005422	si:ch211-107m4.1	94	59.351	ENSGACG00000017006	si:ch211-107m4.1	99	59.385	Gasterosteus_aculeatus
ENSONIG00000005422	si:ch211-107m4.1	70	43.665	ENSGAGG00000016818	-	85	37.755	Gopherus_agassizii
ENSONIG00000005422	si:ch211-107m4.1	81	39.806	ENSGGOG00000011722	HNRNPUL2	91	35.465	Gorilla_gorilla
ENSONIG00000005422	si:ch211-107m4.1	100	94.391	ENSHBUG00000013076	si:ch211-107m4.1	98	94.617	Haplochromis_burtoni
ENSONIG00000005422	si:ch211-107m4.1	75	41.401	ENSHGLG00000003285	-	90	35.928	Heterocephalus_glaber_female
ENSONIG00000005422	si:ch211-107m4.1	95	42.705	ENSIPUG00000009518	si:ch211-107m4.1	90	42.705	Ictalurus_punctatus
ENSONIG00000005422	si:ch211-107m4.1	80	39.571	ENSSTOG00000004327	-	91	35.423	Ictidomys_tridecemlineatus
ENSONIG00000005422	si:ch211-107m4.1	81	39.499	ENSJJAG00000011206	Hnrnpul2	91	34.942	Jaculus_jaculus
ENSONIG00000005422	si:ch211-107m4.1	98	66.086	ENSKMAG00000003651	si:ch211-107m4.1	98	66.086	Kryptolebias_marmoratus
ENSONIG00000005422	si:ch211-107m4.1	76	56.863	ENSLACG00000009304	-	88	35.303	Latimeria_chalumnae
ENSONIG00000005422	si:ch211-107m4.1	77	41.529	ENSLAFG00000005377	-	91	35.819	Loxodonta_africana
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSMFAG00000041014	-	91	35.371	Macaca_fascicularis
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSMNEG00000036955	-	91	35.371	Macaca_nemestrina
ENSONIG00000005422	si:ch211-107m4.1	100	60.643	ENSMAMG00000021489	si:ch211-107m4.1	91	63.742	Mastacembelus_armatus
ENSONIG00000005422	si:ch211-107m4.1	100	94.240	ENSMZEG00005005136	si:ch211-107m4.1	98	94.463	Maylandia_zebra
ENSONIG00000005422	si:ch211-107m4.1	81	39.300	ENSMAUG00000013163	Hnrnpul2	91	34.700	Mesocricetus_auratus
ENSONIG00000005422	si:ch211-107m4.1	81	39.612	ENSMICG00000009943	-	91	35.139	Microcebus_murinus
ENSONIG00000005422	si:ch211-107m4.1	68	42.718	ENSMOCG00000020000	Hnrnpul2	89	35.000	Microtus_ochrogaster
ENSONIG00000005422	si:ch211-107m4.1	89	68.257	ENSMALG00000011564	si:ch211-107m4.1	96	68.257	Monopterus_albus
ENSONIG00000005422	si:ch211-107m4.1	81	39.494	MGP_CAROLIEiJ_G0022656	Hnrnpul2	91	35.095	Mus_caroli
ENSONIG00000005422	si:ch211-107m4.1	81	39.494	ENSMUSG00000071659	Hnrnpul2	91	35.242	Mus_musculus
ENSONIG00000005422	si:ch211-107m4.1	81	39.689	MGP_PahariEiJ_G0014151	Hnrnpul2	91	35.242	Mus_pahari
ENSONIG00000005422	si:ch211-107m4.1	91	36.661	MGP_SPRETEiJ_G0023569	Hnrnpul2	91	35.673	Mus_spretus
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSMPUG00000013707	-	89	35.517	Mustela_putorius_furo
ENSONIG00000005422	si:ch211-107m4.1	76	42.259	ENSMLUG00000000412	-	91	36.558	Myotis_lucifugus
ENSONIG00000005422	si:ch211-107m4.1	77	41.201	ENSNGAG00000012005	Hnrnpul2	91	35.517	Nannospalax_galili
ENSONIG00000005422	si:ch211-107m4.1	97	88.013	ENSNBRG00000000429	si:ch211-107m4.1	91	88.013	Neolamprologus_brichardi
ENSONIG00000005422	si:ch211-107m4.1	77	41.201	ENSNLEG00000004077	-	74	38.061	Nomascus_leucogenys
ENSONIG00000005422	si:ch211-107m4.1	81	39.535	ENSOCUG00000009474	-	87	37.121	Oryctolagus_cuniculus
ENSONIG00000005422	si:ch211-107m4.1	99	63.183	ENSORLG00000024574	si:ch211-107m4.1	99	63.507	Oryzias_latipes
ENSONIG00000005422	si:ch211-107m4.1	99	62.969	ENSOMEG00000018153	si:ch211-107m4.1	98	63.307	Oryzias_melastigma
ENSONIG00000005422	si:ch211-107m4.1	69	43.218	ENSOGAG00000003302	-	66	40.842	Otolemur_garnettii
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSOARG00000016817	-	87	37.026	Ovis_aries
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSPPRG00000006380	-	91	36.047	Panthera_pardus
ENSONIG00000005422	si:ch211-107m4.1	81	39.768	ENSPTRG00000034359	HNRNPUL2	91	35.226	Pan_troglodytes
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSPANG00000023745	-	98	36.377	Papio_anubis
ENSONIG00000005422	si:ch211-107m4.1	81	39.417	ENSPEMG00000015546	Hnrnpul2	91	34.846	Peromyscus_maniculatus_bairdii
ENSONIG00000005422	si:ch211-107m4.1	91	68.048	ENSPFOG00000008050	si:ch211-107m4.1	100	68.048	Poecilia_formosa
ENSONIG00000005422	si:ch211-107m4.1	100	64.012	ENSPLAG00000003485	si:ch211-107m4.1	97	64.465	Poecilia_latipinna
ENSONIG00000005422	si:ch211-107m4.1	100	64.625	ENSPMEG00000005490	si:ch211-107m4.1	97	65.252	Poecilia_mexicana
ENSONIG00000005422	si:ch211-107m4.1	100	62.784	ENSPREG00000014973	si:ch211-107m4.1	97	63.199	Poecilia_reticulata
ENSONIG00000005422	si:ch211-107m4.1	81	38.953	ENSPCAG00000010016	-	91	35.277	Procavia_capensis
ENSONIG00000005422	si:ch211-107m4.1	77	41.201	ENSPCOG00000013502	-	91	35.569	Propithecus_coquereli
ENSONIG00000005422	si:ch211-107m4.1	76	41.423	ENSPVAG00000003475	-	91	36.179	Pteropus_vampyrus
ENSONIG00000005422	si:ch211-107m4.1	81	39.494	ENSRNOG00000019507	Hnrnpul2	91	35.536	Rattus_norvegicus
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSRBIG00000037820	-	91	35.269	Rhinopithecus_bieti
ENSONIG00000005422	si:ch211-107m4.1	77	40.891	ENSRROG00000036561	-	91	35.269	Rhinopithecus_roxellana
ENSONIG00000005422	si:ch211-107m4.1	93	67.391	ENSSFOG00015006544	si:ch211-107m4.1	70	67.391	Scleropages_formosus
ENSONIG00000005422	si:ch211-107m4.1	99	64.420	ENSSMAG00000017226	si:ch211-107m4.1	99	65.329	Scophthalmus_maximus
ENSONIG00000005422	si:ch211-107m4.1	99	69.697	ENSSPAG00000006972	si:ch211-107m4.1	97	70.308	Stegastes_partitus
ENSONIG00000005422	si:ch211-107m4.1	84	38.879	ENSSSCG00000028542	-	84	37.519	Sus_scrofa
ENSONIG00000005422	si:ch211-107m4.1	100	56.422	ENSTRUG00000012843	si:ch211-107m4.1	92	58.843	Takifugu_rubripes
ENSONIG00000005422	si:ch211-107m4.1	92	57.239	ENSTNIG00000000741	si:ch211-107m4.1	100	57.239	Tetraodon_nigroviridis
ENSONIG00000005422	si:ch211-107m4.1	64	39.655	ENSTTRG00000002475	-	78	34.853	Tursiops_truncatus
ENSONIG00000005422	si:ch211-107m4.1	77	40.688	ENSUAMG00000025971	-	91	35.756	Ursus_americanus
ENSONIG00000005422	si:ch211-107m4.1	77	40.688	ENSVVUG00000029847	-	91	35.756	Vulpes_vulpes
ENSONIG00000005422	si:ch211-107m4.1	93	34.992	ENSXETG00000006015	hnrnpul2	85	36.434	Xenopus_tropicalis
ENSONIG00000005422	si:ch211-107m4.1	100	64.142	ENSXMAG00000003224	si:ch211-107m4.1	97	64.762	Xiphophorus_maculatus