EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005519 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: -
Full Name: ras-related protein Rab-34
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 46403 bases
Position: chrGL831384.1:151429-197831
Accession: 100698980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000006936	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSONIP00000006937	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000006941	-	810	-	ENSONIP00000006936	254 (aa)	XP_025766434	I3JDJ6
ENSONIT00000006942	-	780	-	ENSONIP00000006937	259 (aa)	-	I3JDJ7

Gene Model

Click here to download ENSONIG00000005519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005519	rab34b	63	31.250	ENSONIG00000006876	rab22a	81	31.250
ENSONIG00000005519	rab34b	69	33.908	ENSONIG00000010435	rab11bb	74	33.908
ENSONIG00000005519	rab34b	72	31.148	ENSONIG00000018673	rab18b	88	31.148
ENSONIG00000005519	rab34b	63	37.267	ENSONIG00000002065	rab1ba	77	37.267
ENSONIG00000005519	rab34b	100	68.750	ENSONIG00000013175	rab34a	96	68.750
ENSONIG00000005519	rab34b	80	33.990	ENSONIG00000015990	rab35b	96	33.990
ENSONIG00000005519	rab34b	61	40.994	ENSONIG00000003367	-	78	40.994
ENSONIG00000005519	rab34b	66	35.329	ENSONIG00000005781	rab15	77	35.329
ENSONIG00000005519	rab34b	65	37.952	ENSONIG00000008545	RAB39B	77	37.952
ENSONIG00000005519	rab34b	61	31.818	ENSONIG00000011542	-	93	31.818
ENSONIG00000005519	rab34b	80	31.193	ENSONIG00000016851	-	96	31.193
ENSONIG00000005519	rab34b	62	31.875	ENSONIG00000016279	-	71	31.875
ENSONIG00000005519	rab34b	81	31.429	ENSONIG00000002284	rab25b	94	31.429
ENSONIG00000005519	rab34b	80	33.173	ENSONIG00000002281	rab11al	93	33.173
ENSONIG00000005519	rab34b	82	31.604	ENSONIG00000002410	rab25a	97	31.604
ENSONIG00000005519	rab34b	63	32.515	ENSONIG00000020336	RAB7A	78	32.515
ENSONIG00000005519	rab34b	80	34.762	ENSONIG00000015828	rab33a	71	34.762
ENSONIG00000005519	rab34b	56	30.201	ENSONIG00000020675	rab9a	72	30.201
ENSONIG00000005519	rab34b	66	35.928	ENSONIG00000000558	-	76	35.928
ENSONIG00000005519	rab34b	80	33.005	ENSONIG00000002425	rab5aa	89	33.005
ENSONIG00000005519	rab34b	63	33.125	ENSONIG00000001113	rab5c	71	32.500
ENSONIG00000005519	rab34b	63	38.750	ENSONIG00000006340	rab13	78	38.750
ENSONIG00000005519	rab34b	51	30.827	ENSONIG00000016776	RAB17	72	30.827
ENSONIG00000005519	rab34b	60	33.987	ENSONIG00000003725	rab18a	74	33.987
ENSONIG00000005519	rab34b	69	33.908	ENSONIG00000002544	-	74	33.908
ENSONIG00000005519	rab34b	63	38.125	ENSONIG00000005708	rab30	77	38.125
ENSONIG00000005519	rab34b	66	33.533	ENSONIG00000012069	RAB15	78	33.533
ENSONIG00000005519	rab34b	66	30.857	ENSONIG00000019036	-	84	30.857
ENSONIG00000005519	rab34b	63	38.509	ENSONIG00000009886	rab6bb	76	38.509
ENSONIG00000005519	rab34b	61	35.256	ENSONIG00000002535	rab11ba	70	35.256
ENSONIG00000005519	rab34b	63	35.000	ENSONIG00000018469	rab12	82	30.918
ENSONIG00000005519	rab34b	60	34.615	ENSONIG00000020581	rab9b	76	34.615
ENSONIG00000005519	rab34b	65	35.928	ENSONIG00000009443	si:dkey-16l2.16	95	33.495
ENSONIG00000005519	rab34b	80	31.068	ENSONIG00000020296	si:dkey-13a21.4	94	31.068
ENSONIG00000005519	rab34b	63	37.267	ENSONIG00000002774	RAB41	75	37.267
ENSONIG00000005519	rab34b	80	32.039	ENSONIG00000015072	RAB11A	93	32.039
ENSONIG00000005519	rab34b	61	38.217	ENSONIG00000006997	-	73	38.217
ENSONIG00000005519	rab34b	57	37.931	ENSONIG00000009749	rab23	64	40.385
ENSONIG00000005519	rab34b	66	36.527	ENSONIG00000014099	rab14	76	36.527
ENSONIG00000005519	rab34b	63	37.888	ENSONIG00000006819	-	77	37.888
ENSONIG00000005519	rab34b	65	35.758	ENSONIG00000016622	rab2a	76	35.758
ENSONIG00000005519	rab34b	63	39.752	ENSONIG00000004394	rab6a	76	39.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005519	rab34b	85	92.558	ENSAPOG00000019147	rab34b	96	81.592	Acanthochromis_polyacanthus
ENSONIG00000005519	rab34b	100	83.071	ENSACIG00000004859	rab34b	99	83.071	Amphilophus_citrinellus
ENSONIG00000005519	rab34b	100	85.547	ENSAOCG00000007106	rab34b	93	85.547	Amphiprion_ocellaris
ENSONIG00000005519	rab34b	91	88.261	ENSAPEG00000018607	rab34b	84	88.034	Amphiprion_percula
ENSONIG00000005519	rab34b	94	84.167	ENSATEG00000006851	rab34b	94	84.167	Anabas_testudineus
ENSONIG00000005519	rab34b	100	98.819	ENSACLG00000005733	rab34b	96	98.819	Astatotilapia_calliptera
ENSONIG00000005519	rab34b	99	71.146	ENSAMXG00000006018	rab34b	98	71.146	Astyanax_mexicanus
ENSONIG00000005519	rab34b	93	81.356	ENSCSEG00000018133	rab34b	100	77.778	Cynoglossus_semilaevis
ENSONIG00000005519	rab34b	99	73.518	ENSDARG00000010977	rab34b	98	73.518	Danio_rerio
ENSONIG00000005519	rab34b	100	81.961	ENSELUG00000005597	rab34b	99	81.961	Esox_lucius
ENSONIG00000005519	rab34b	100	86.220	ENSFHEG00000004532	rab34b	100	86.220	Fundulus_heteroclitus
ENSONIG00000005519	rab34b	81	84.058	ENSGMOG00000007140	rab34b	100	84.058	Gadus_morhua
ENSONIG00000005519	rab34b	100	88.235	ENSGACG00000020514	rab34b	99	88.235	Gasterosteus_aculeatus
ENSONIG00000005519	rab34b	99	70.751	ENSIPUG00000024531	rab34	98	70.751	Ictalurus_punctatus
ENSONIG00000005519	rab34b	100	88.189	ENSKMAG00000019341	rab34b	100	88.189	Kryptolebias_marmoratus
ENSONIG00000005519	rab34b	100	86.667	ENSLBEG00000027819	rab34b	100	86.667	Labrus_bergylta
ENSONIG00000005519	rab34b	100	86.667	ENSMAMG00000020214	rab34b	100	86.667	Mastacembelus_armatus
ENSONIG00000005519	rab34b	100	82.283	ENSMMOG00000010936	rab34b	85	85.950	Mola_mola
ENSONIG00000005519	rab34b	93	87.712	ENSMALG00000018499	rab34b	93	84.615	Monopterus_albus
ENSONIG00000005519	rab34b	100	86.220	ENSORLG00000003119	rab34b	92	86.220	Oryzias_latipes
ENSONIG00000005519	rab34b	100	86.614	ENSORLG00020016139	rab34b	92	86.614	Oryzias_latipes_hni
ENSONIG00000005519	rab34b	100	86.220	ENSORLG00015000584	rab34b	92	86.220	Oryzias_latipes_hsok
ENSONIG00000005519	rab34b	100	87.795	ENSOMEG00000010334	rab34b	98	86.008	Oryzias_melastigma
ENSONIG00000005519	rab34b	99	70.866	ENSPKIG00000013326	rab34b	98	70.866	Paramormyrops_kingsleyae
ENSONIG00000005519	rab34b	100	84.646	ENSPMGG00000021697	rab34b	99	84.646	Periophthalmus_magnuspinnatus
ENSONIG00000005519	rab34b	100	87.795	ENSPFOG00000011444	rab34b	99	87.795	Poecilia_formosa
ENSONIG00000005519	rab34b	100	87.795	ENSPLAG00000005074	rab34b	100	87.795	Poecilia_latipinna
ENSONIG00000005519	rab34b	100	87.795	ENSPMEG00000013297	rab34b	100	87.795	Poecilia_mexicana
ENSONIG00000005519	rab34b	100	87.008	ENSPREG00000009813	rab34b	100	87.008	Poecilia_reticulata
ENSONIG00000005519	rab34b	100	86.220	ENSPNYG00000017153	rab34b	99	98.305	Pundamilia_nyererei
ENSONIG00000005519	rab34b	93	73.840	ENSPNAG00000015040	rab34b	99	73.840	Pygocentrus_nattereri
ENSONIG00000005519	rab34b	100	73.047	ENSSFOG00015005188	rab34	99	73.047	Scleropages_formosus
ENSONIG00000005519	rab34b	93	88.511	ENSSMAG00000019926	rab34b	100	85.654	Scophthalmus_maximus
ENSONIG00000005519	rab34b	100	92.157	ENSSDUG00000016760	rab34b	80	92.157	Seriola_dumerili
ENSONIG00000005519	rab34b	72	94.565	ENSSLDG00000014812	rab34b	90	94.565	Seriola_lalandi_dorsalis
ENSONIG00000005519	rab34b	100	86.614	ENSSPAG00000002801	rab34b	100	86.614	Stegastes_partitus
ENSONIG00000005519	rab34b	94	84.167	ENSTRUG00000014481	rab34b	97	84.167	Takifugu_rubripes
ENSONIG00000005519	rab34b	100	84.314	ENSTNIG00000016158	rab34b	99	84.314	Tetraodon_nigroviridis