EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005599 (Gene tree)
Gene ID: 100693542
Gene Symbol: urb1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 16099 bases
Position: chrGL831218.1:906010-922108
Accession: 100693542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007048	Npa1	PF11707.8	5.1e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007053	-	6878	-	ENSONIP00000007048	2254 (aa)	XP_003450230	I3JDV8

Gene Model

Click here to download ENSONIG00000005599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005599	urb1	99	45.358	ENSG00000142207	URB1	99	45.094	Homo_sapiens
ENSONIG00000005599	urb1	100	74.812	ENSAPOG00000020308	urb1	99	76.989	Acanthochromis_polyacanthus
ENSONIG00000005599	urb1	99	45.096	ENSAMEG00000011998	URB1	99	45.096	Ailuropoda_melanoleuca
ENSONIG00000005599	urb1	98	80.036	ENSACIG00000003248	urb1	99	80.036	Amphilophus_citrinellus
ENSONIG00000005599	urb1	100	70.261	ENSAOCG00000010364	urb1	100	70.596	Amphiprion_ocellaris
ENSONIG00000005599	urb1	97	77.932	ENSAPEG00000010758	urb1	99	77.932	Amphiprion_percula
ENSONIG00000005599	urb1	100	74.935	ENSATEG00000011790	urb1	100	74.935	Anabas_testudineus
ENSONIG00000005599	urb1	97	46.869	ENSAPLG00000012791	URB1	99	47.017	Anas_platyrhynchos
ENSONIG00000005599	urb1	99	45.593	ENSACAG00000002817	URB1	99	45.788	Anolis_carolinensis
ENSONIG00000005599	urb1	99	45.139	ENSANAG00000024617	URB1	99	44.967	Aotus_nancymaae
ENSONIG00000005599	urb1	100	96.188	ENSACLG00000024865	urb1	100	96.188	Astatotilapia_calliptera
ENSONIG00000005599	urb1	99	49.276	ENSAMXG00000012306	urb1	99	49.362	Astyanax_mexicanus
ENSONIG00000005599	urb1	99	44.124	ENSBTAG00000012412	URB1	99	44.343	Bos_taurus
ENSONIG00000005599	urb1	99	45.251	ENSCJAG00000009118	URB1	99	45.078	Callithrix_jacchus
ENSONIG00000005599	urb1	99	44.256	ENSCAFG00000008892	URB1	99	44.256	Canis_familiaris
ENSONIG00000005599	urb1	99	44.037	ENSCAFG00020025987	-	99	44.105	Canis_lupus_dingo
ENSONIG00000005599	urb1	99	43.624	ENSCAFG00020025994	-	99	43.693	Canis_lupus_dingo
ENSONIG00000005599	urb1	99	44.274	ENSCHIG00000015645	URB1	99	44.274	Capra_hircus
ENSONIG00000005599	urb1	100	44.822	ENSTSYG00000013286	URB1	99	44.822	Carlito_syrichta
ENSONIG00000005599	urb1	98	43.476	ENSCAPG00000015589	URB1	99	43.476	Cavia_aperea
ENSONIG00000005599	urb1	100	44.066	ENSCPOG00000006748	URB1	99	44.023	Cavia_porcellus
ENSONIG00000005599	urb1	99	45.051	ENSCCAG00000021299	URB1	99	44.880	Cebus_capucinus
ENSONIG00000005599	urb1	100	45.526	ENSCATG00000042630	URB1	99	45.570	Cercocebus_atys
ENSONIG00000005599	urb1	100	45.216	ENSCLAG00000005262	URB1	99	45.216	Chinchilla_lanigera
ENSONIG00000005599	urb1	100	44.594	ENSCSAG00000009584	URB1	99	44.637	Chlorocebus_sabaeus
ENSONIG00000005599	urb1	99	47.480	ENSCPBG00000006454	URB1	99	47.694	Chrysemys_picta_bellii
ENSONIG00000005599	urb1	100	45.355	ENSCANG00000031088	URB1	99	45.399	Colobus_angolensis_palliatus
ENSONIG00000005599	urb1	99	45.310	ENSCGRG00001010616	Urb1	99	45.166	Cricetulus_griseus_chok1gshd
ENSONIG00000005599	urb1	98	45.398	ENSCGRG00000015840	Urb1	99	45.398	Cricetulus_griseus_crigri
ENSONIG00000005599	urb1	100	66.491	ENSCSEG00000012616	urb1	99	66.491	Cynoglossus_semilaevis
ENSONIG00000005599	urb1	93	68.438	ENSCVAG00000009076	urb1	98	73.053	Cyprinodon_variegatus
ENSONIG00000005599	urb1	99	53.700	ENSDARG00000060308	urb1	99	53.744	Danio_rerio
ENSONIG00000005599	urb1	85	47.824	ENSDNOG00000015586	URB1	99	47.824	Dasypus_novemcinctus
ENSONIG00000005599	urb1	99	45.043	ENSDORG00000006735	Urb1	99	45.209	Dipodomys_ordii
ENSONIG00000005599	urb1	92	52.909	ENSETEG00000009080	URB1	91	52.909	Echinops_telfairi
ENSONIG00000005599	urb1	99	44.070	ENSEASG00005007711	URB1	99	44.692	Equus_asinus_asinus
ENSONIG00000005599	urb1	92	55.846	ENSECAG00000013206	URB1	99	55.846	Equus_caballus
ENSONIG00000005599	urb1	99	56.854	ENSELUG00000020516	urb1	99	57.030	Esox_lucius
ENSONIG00000005599	urb1	99	44.255	ENSFCAG00000002177	URB1	99	44.255	Felis_catus
ENSONIG00000005599	urb1	98	42.851	ENSFALG00000004636	URB1	99	42.857	Ficedula_albicollis
ENSONIG00000005599	urb1	99	45.214	ENSFDAG00000007288	URB1	95	44.972	Fukomys_damarensis
ENSONIG00000005599	urb1	100	65.551	ENSFHEG00000000202	urb1	99	68.943	Fundulus_heteroclitus
ENSONIG00000005599	urb1	93	58.275	ENSGMOG00000001838	urb1	94	58.312	Gadus_morhua
ENSONIG00000005599	urb1	99	47.382	ENSGALG00000015887	URB1	99	47.558	Gallus_gallus
ENSONIG00000005599	urb1	99	67.109	ENSGAFG00000020694	urb1	99	70.476	Gambusia_affinis
ENSONIG00000005599	urb1	99	73.621	ENSGACG00000011703	urb1	99	73.621	Gasterosteus_aculeatus
ENSONIG00000005599	urb1	99	47.281	ENSGAGG00000022544	URB1	99	47.281	Gopherus_agassizii
ENSONIG00000005599	urb1	99	45.467	ENSGGOG00000000285	URB1	99	45.312	Gorilla_gorilla
ENSONIG00000005599	urb1	100	96.055	ENSHBUG00000001904	urb1	100	96.055	Haplochromis_burtoni
ENSONIG00000005599	urb1	100	43.798	ENSHGLG00000004907	URB1	99	43.798	Heterocephalus_glaber_female
ENSONIG00000005599	urb1	99	44.168	ENSHGLG00100010749	URB1	99	44.168	Heterocephalus_glaber_male
ENSONIG00000005599	urb1	74	77.419	ENSHCOG00000018683	urb1	99	77.419	Hippocampus_comes
ENSONIG00000005599	urb1	99	49.213	ENSIPUG00000014721	urb1	99	49.388	Ictalurus_punctatus
ENSONIG00000005599	urb1	99	44.931	ENSSTOG00000004539	URB1	99	44.600	Ictidomys_tridecemlineatus
ENSONIG00000005599	urb1	99	66.946	ENSKMAG00000006001	urb1	99	72.699	Kryptolebias_marmoratus
ENSONIG00000005599	urb1	95	74.145	ENSLBEG00000027208	urb1	99	74.145	Labrus_bergylta
ENSONIG00000005599	urb1	99	44.938	ENSLACG00000017059	URB1	99	45.000	Latimeria_chalumnae
ENSONIG00000005599	urb1	99	53.843	ENSLOCG00000009190	urb1	99	53.843	Lepisosteus_oculatus
ENSONIG00000005599	urb1	99	44.796	ENSLAFG00000010407	URB1	99	44.796	Loxodonta_africana
ENSONIG00000005599	urb1	100	45.371	ENSMFAG00000034391	URB1	97	45.328	Macaca_fascicularis
ENSONIG00000005599	urb1	100	45.248	ENSMMUG00000010295	URB1	99	45.292	Macaca_mulatta
ENSONIG00000005599	urb1	100	44.580	ENSMNEG00000032981	URB1	99	44.624	Macaca_nemestrina
ENSONIG00000005599	urb1	100	45.546	ENSMLEG00000041435	URB1	99	45.566	Mandrillus_leucophaeus
ENSONIG00000005599	urb1	99	70.405	ENSMAMG00000011238	urb1	99	70.405	Mastacembelus_armatus
ENSONIG00000005599	urb1	100	89.634	ENSMZEG00005011862	urb1	100	89.634	Maylandia_zebra
ENSONIG00000005599	urb1	98	46.991	ENSMGAG00000014512	URB1	99	47.169	Meleagris_gallopavo
ENSONIG00000005599	urb1	92	53.846	ENSMAUG00000010516	Urb1	99	53.097	Mesocricetus_auratus
ENSONIG00000005599	urb1	99	45.081	ENSMICG00000016424	URB1	99	45.081	Microcebus_murinus
ENSONIG00000005599	urb1	99	44.100	ENSMOCG00000012613	Urb1	99	44.192	Microtus_ochrogaster
ENSONIG00000005599	urb1	99	44.154	ENSMODG00000021076	URB1	99	44.154	Monodelphis_domestica
ENSONIG00000005599	urb1	99	70.318	ENSMALG00000017411	urb1	99	70.318	Monopterus_albus
ENSONIG00000005599	urb1	99	44.328	MGP_CAROLIEiJ_G0020948	Urb1	99	44.328	Mus_caroli
ENSONIG00000005599	urb1	99	44.143	ENSMUSG00000039929	Urb1	99	44.143	Mus_musculus
ENSONIG00000005599	urb1	99	44.086	MGP_PahariEiJ_G0016653	Urb1	99	44.086	Mus_pahari
ENSONIG00000005599	urb1	99	44.080	MGP_SPRETEiJ_G0021854	Urb1	99	44.091	Mus_spretus
ENSONIG00000005599	urb1	99	44.976	ENSMPUG00000001123	URB1	99	44.976	Mustela_putorius_furo
ENSONIG00000005599	urb1	99	43.928	ENSNGAG00000001905	Urb1	99	43.928	Nannospalax_galili
ENSONIG00000005599	urb1	83	89.569	ENSNBRG00000001049	urb1	99	89.569	Neolamprologus_brichardi
ENSONIG00000005599	urb1	99	44.214	ENSNLEG00000026872	URB1	99	43.984	Nomascus_leucogenys
ENSONIG00000005599	urb1	93	50.191	ENSMEUG00000010828	URB1	96	41.577	Notamacropus_eugenii
ENSONIG00000005599	urb1	99	43.120	ENSOPRG00000013482	URB1	99	43.120	Ochotona_princeps
ENSONIG00000005599	urb1	99	44.182	ENSODEG00000002587	URB1	99	44.182	Octodon_degus
ENSONIG00000005599	urb1	99	45.170	ENSOCUG00000009381	URB1	99	45.213	Oryctolagus_cuniculus
ENSONIG00000005599	urb1	99	69.013	ENSORLG00000003429	urb1	99	69.013	Oryzias_latipes
ENSONIG00000005599	urb1	99	68.744	ENSORLG00020013785	urb1	99	68.744	Oryzias_latipes_hni
ENSONIG00000005599	urb1	93	73.278	ENSORLG00015019421	urb1	99	73.278	Oryzias_latipes_hsok
ENSONIG00000005599	urb1	77	69.395	ENSOMEG00000002094	urb1	99	69.395	Oryzias_melastigma
ENSONIG00000005599	urb1	100	45.447	ENSOGAG00000017140	URB1	99	45.379	Otolemur_garnettii
ENSONIG00000005599	urb1	95	48.231	ENSOARG00000013679	URB1	99	47.833	Ovis_aries
ENSONIG00000005599	urb1	99	45.487	ENSPPAG00000003423	URB1	99	45.312	Pan_paniscus
ENSONIG00000005599	urb1	99	44.401	ENSPPRG00000023131	URB1	99	44.401	Panthera_pardus
ENSONIG00000005599	urb1	89	45.343	ENSPTIG00000016125	URB1	94	45.343	Panthera_tigris_altaica
ENSONIG00000005599	urb1	99	45.399	ENSPTRG00000013852	URB1	99	45.225	Pan_troglodytes
ENSONIG00000005599	urb1	100	45.502	ENSPANG00000021964	URB1	99	45.546	Papio_anubis
ENSONIG00000005599	urb1	99	54.725	ENSPKIG00000003683	urb1	99	54.945	Paramormyrops_kingsleyae
ENSONIG00000005599	urb1	99	45.046	ENSPEMG00000021205	Urb1	98	45.046	Peromyscus_maniculatus_bairdii
ENSONIG00000005599	urb1	80	32.525	ENSPMAG00000009733	URB1	100	32.839	Petromyzon_marinus
ENSONIG00000005599	urb1	99	43.761	ENSPCIG00000016350	URB1	99	44.136	Phascolarctos_cinereus
ENSONIG00000005599	urb1	97	70.502	ENSPLAG00000004371	urb1	100	70.502	Poecilia_latipinna
ENSONIG00000005599	urb1	100	71.018	ENSPMEG00000006634	urb1	100	71.018	Poecilia_mexicana
ENSONIG00000005599	urb1	100	70.557	ENSPREG00000013453	urb1	100	70.557	Poecilia_reticulata
ENSONIG00000005599	urb1	99	45.033	ENSPPYG00000011359	URB1	99	45.007	Pongo_abelii
ENSONIG00000005599	urb1	99	39.860	ENSPCAG00000007430	URB1	99	39.860	Procavia_capensis
ENSONIG00000005599	urb1	99	44.895	ENSPCOG00000022695	URB1	99	44.943	Propithecus_coquereli
ENSONIG00000005599	urb1	99	43.860	ENSPVAG00000000889	URB1	99	43.860	Pteropus_vampyrus
ENSONIG00000005599	urb1	100	90.531	ENSPNYG00000010589	urb1	100	90.531	Pundamilia_nyererei
ENSONIG00000005599	urb1	99	50.418	ENSPNAG00000019324	urb1	99	50.550	Pygocentrus_nattereri
ENSONIG00000005599	urb1	99	43.728	ENSRNOG00000002080	Urb1	99	43.772	Rattus_norvegicus
ENSONIG00000005599	urb1	100	45.205	ENSRBIG00000033122	URB1	99	45.248	Rhinopithecus_bieti
ENSONIG00000005599	urb1	100	45.181	ENSRROG00000040237	URB1	99	45.225	Rhinopithecus_roxellana
ENSONIG00000005599	urb1	99	45.018	ENSSBOG00000027672	URB1	99	44.847	Saimiri_boliviensis_boliviensis
ENSONIG00000005599	urb1	99	44.560	ENSSHAG00000005140	URB1	100	44.560	Sarcophilus_harrisii
ENSONIG00000005599	urb1	93	56.445	ENSSFOG00015000339	urb1	99	56.730	Scleropages_formosus
ENSONIG00000005599	urb1	100	75.254	ENSSMAG00000003782	urb1	100	75.651	Scophthalmus_maximus
ENSONIG00000005599	urb1	100	79.204	ENSSDUG00000012313	urb1	99	79.204	Seriola_dumerili
ENSONIG00000005599	urb1	100	78.894	ENSSLDG00000023179	urb1	99	78.894	Seriola_lalandi_dorsalis
ENSONIG00000005599	urb1	99	46.244	ENSSPUG00000012447	URB1	99	46.418	Sphenodon_punctatus
ENSONIG00000005599	urb1	99	78.140	ENSSPAG00000006325	urb1	99	78.184	Stegastes_partitus
ENSONIG00000005599	urb1	99	44.100	ENSSSCG00000032024	URB1	99	44.187	Sus_scrofa
ENSONIG00000005599	urb1	74	48.543	ENSTGUG00000013442	URB1	100	48.393	Taeniopygia_guttata
ENSONIG00000005599	urb1	100	69.027	ENSTRUG00000009372	urb1	100	69.027	Takifugu_rubripes
ENSONIG00000005599	urb1	99	67.484	ENSTNIG00000016277	urb1	99	67.484	Tetraodon_nigroviridis
ENSONIG00000005599	urb1	77	49.425	ENSTBEG00000010044	URB1	79	49.425	Tupaia_belangeri
ENSONIG00000005599	urb1	90	50.311	ENSTTRG00000007712	URB1	91	50.311	Tursiops_truncatus
ENSONIG00000005599	urb1	99	44.702	ENSUAMG00000012231	URB1	99	44.702	Ursus_americanus
ENSONIG00000005599	urb1	82	55.489	ENSUMAG00000017419	URB1	95	46.007	Ursus_maritimus
ENSONIG00000005599	urb1	67	61.600	ENSVPAG00000001164	URB1	67	61.600	Vicugna_pacos
ENSONIG00000005599	urb1	99	44.755	ENSVVUG00000000551	URB1	99	44.755	Vulpes_vulpes
ENSONIG00000005599	urb1	99	45.092	ENSXETG00000009895	urb1	99	44.795	Xenopus_tropicalis
ENSONIG00000005599	urb1	100	65.959	ENSXCOG00000005500	urb1	99	68.522	Xiphophorus_couchianus
ENSONIG00000005599	urb1	100	66.357	ENSXMAG00000007253	urb1	98	68.939	Xiphophorus_maculatus