EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005610 (Gene tree)
Gene ID: -
Gene Symbol: scaf4b
Alias: -
Full Name: SR-related CTD-associated factor 4b
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9137 bases
Position: chrGL831218.1:926028-935164
Accession: ZDB-GENE-050506-42
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007060	RRM_1	PF00076.22	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007065	-	1890	-	ENSONIP00000007060	630 (aa)	-	I3JDX0

Gene Model

Click here to download ENSONIG00000005610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005610	scaf4b	87	74.914	ENSAPOG00000019615	scaf4b	68	74.914	Acanthochromis_polyacanthus
ENSONIG00000005610	scaf4b	87	75.945	ENSAOCG00000010433	scaf4b	71	66.772	Amphiprion_ocellaris
ENSONIG00000005610	scaf4b	87	76.289	ENSAPEG00000010913	scaf4b	71	67.087	Amphiprion_percula
ENSONIG00000005610	scaf4b	98	64.032	ENSATEG00000011758	scaf4b	71	62.701	Anabas_testudineus
ENSONIG00000005610	scaf4b	99	75.552	ENSACLG00000024833	scaf4b	71	75.710	Astatotilapia_calliptera
ENSONIG00000005610	scaf4b	66	79.137	ENSCJAG00000008993	SCAF4	51	78.205	Callithrix_jacchus
ENSONIG00000005610	scaf4b	63	79.856	ENSCAFG00020026019	SCAF4	52	70.667	Canis_lupus_dingo
ENSONIG00000005610	scaf4b	86	66.096	ENSCSEG00000012808	-	56	82.692	Cynoglossus_semilaevis
ENSONIG00000005610	scaf4b	73	88.387	ENSCVAG00000009142	scaf4b	56	88.462	Cyprinodon_variegatus
ENSONIG00000005610	scaf4b	55	65.468	ENSELUG00000002779	SCAF8	64	63.871	Esox_lucius
ENSONIG00000005610	scaf4b	99	58.991	ENSFHEG00000007634	scaf4b	71	61.950	Fundulus_heteroclitus
ENSONIG00000005610	scaf4b	57	77.206	ENSHCOG00000006849	scaf4a	51	76.623	Hippocampus_comes
ENSONIG00000005610	scaf4b	67	68.276	ENSIPUG00000019311	-	59	65.385	Ictalurus_punctatus
ENSONIG00000005610	scaf4b	99	62.166	ENSKMAG00000005742	scaf4b	71	70.656	Kryptolebias_marmoratus
ENSONIG00000005610	scaf4b	67	72.593	ENSMALG00000013825	scaf4a	50	72.727	Monopterus_albus
ENSONIG00000005610	scaf4b	74	91.875	ENSORLG00000003420	scaf4b	72	58.176	Oryzias_latipes
ENSONIG00000005610	scaf4b	74	91.250	ENSORLG00020013853	scaf4b	72	58.176	Oryzias_latipes_hni
ENSONIG00000005610	scaf4b	67	73.913	ENSORLG00015017880	scaf4a	51	45.441	Oryzias_latipes_hsok
ENSONIG00000005610	scaf4b	66	78.986	ENSPKIG00000022408	scaf4a	61	76.923	Paramormyrops_kingsleyae
ENSONIG00000005610	scaf4b	66	58.993	ENSPMAG00000006192	SCAF8	60	58.333	Petromyzon_marinus
ENSONIG00000005610	scaf4b	99	58.970	ENSPLAG00000004403	-	69	70.385	Poecilia_latipinna
ENSONIG00000005610	scaf4b	99	59.148	ENSPMEG00000006666	-	69	71.154	Poecilia_mexicana
ENSONIG00000005610	scaf4b	99	58.814	ENSPREG00000013510	scaf4b	69	69.318	Poecilia_reticulata
ENSONIG00000005610	scaf4b	99	75.394	ENSPNYG00000010526	scaf4b	71	75.552	Pundamilia_nyererei
ENSONIG00000005610	scaf4b	99	64.780	ENSSMAG00000003738	scaf4b	71	64.780	Scophthalmus_maximus
ENSONIG00000005610	scaf4b	99	65.615	ENSSDUG00000012380	scaf4b	71	64.882	Seriola_dumerili
ENSONIG00000005610	scaf4b	99	65.457	ENSSLDG00000023152	-	71	64.724	Seriola_lalandi_dorsalis
ENSONIG00000005610	scaf4b	86	69.338	ENSTRUG00000009536	-	69	69.338	Takifugu_rubripes