EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005804 (Gene tree)
Gene ID: 100701659
Gene Symbol: ddb1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 45247 bases
Position: chrGL831227.1:1178910-1224156
Accession: 100701659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007309	CPSF_A	PF03178.15	1.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007314	-	4060	XM_003450791	ENSONIP00000007309	1140 (aa)	XP_003450839	I3JEL8

Gene Model

Click here to download ENSONIG00000005804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005804	ddb1	100	91.404	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSONIG00000005804	ddb1	98	98.654	ENSAPOG00000005036	ddb1	99	98.673	Acanthochromis_polyacanthus
ENSONIG00000005804	ddb1	100	91.491	ENSAMEG00000016518	DDB1	100	91.491	Ailuropoda_melanoleuca
ENSONIG00000005804	ddb1	86	99.184	ENSACIG00000020624	ddb1	99	99.184	Amphilophus_citrinellus
ENSONIG00000005804	ddb1	100	98.684	ENSAOCG00000003066	ddb1	100	98.684	Amphiprion_ocellaris
ENSONIG00000005804	ddb1	100	98.684	ENSAPEG00000000092	ddb1	100	98.684	Amphiprion_percula
ENSONIG00000005804	ddb1	94	98.698	ENSATEG00000020571	ddb1	97	98.698	Anabas_testudineus
ENSONIG00000005804	ddb1	99	89.912	ENSAPLG00000007174	DDB1	99	89.912	Anas_platyrhynchos
ENSONIG00000005804	ddb1	100	90.877	ENSACAG00000017758	DDB1	100	90.877	Anolis_carolinensis
ENSONIG00000005804	ddb1	100	91.404	ENSANAG00000021878	DDB1	100	91.404	Aotus_nancymaae
ENSONIG00000005804	ddb1	100	99.912	ENSACLG00000012401	ddb1	100	99.912	Astatotilapia_calliptera
ENSONIG00000005804	ddb1	100	91.404	ENSBTAG00000021569	DDB1	93	91.404	Bos_taurus
ENSONIG00000005804	ddb1	100	36.784	WBGene00010890	ddb-1	100	36.784	Caenorhabditis_elegans
ENSONIG00000005804	ddb1	100	91.404	ENSCJAG00000019319	DDB1	100	91.404	Callithrix_jacchus
ENSONIG00000005804	ddb1	100	91.491	ENSCAFG00000016264	DDB1	100	91.491	Canis_familiaris
ENSONIG00000005804	ddb1	94	91.721	ENSCAFG00020012722	DDB1	99	91.721	Canis_lupus_dingo
ENSONIG00000005804	ddb1	100	91.404	ENSCHIG00000014969	DDB1	100	91.404	Capra_hircus
ENSONIG00000005804	ddb1	100	91.053	ENSTSYG00000008027	DDB1	100	91.053	Carlito_syrichta
ENSONIG00000005804	ddb1	98	91.332	ENSCAPG00000010786	DDB1	100	91.332	Cavia_aperea
ENSONIG00000005804	ddb1	100	91.316	ENSCPOG00000009956	DDB1	100	91.316	Cavia_porcellus
ENSONIG00000005804	ddb1	100	91.404	ENSCCAG00000035883	DDB1	100	91.404	Cebus_capucinus
ENSONIG00000005804	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSONIG00000005804	ddb1	100	91.404	ENSCLAG00000004126	DDB1	100	91.404	Chinchilla_lanigera
ENSONIG00000005804	ddb1	100	91.404	ENSCSAG00000006392	DDB1	100	91.404	Chlorocebus_sabaeus
ENSONIG00000005804	ddb1	88	85.038	ENSCHOG00000011377	DDB1	90	85.038	Choloepus_hoffmanni
ENSONIG00000005804	ddb1	100	91.228	ENSCPBG00000017728	DDB1	100	91.228	Chrysemys_picta_bellii
ENSONIG00000005804	ddb1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSONIG00000005804	ddb1	94	60.645	ENSCSAVG00000004783	-	100	60.645	Ciona_savignyi
ENSONIG00000005804	ddb1	100	91.404	ENSCANG00000019948	DDB1	100	91.404	Colobus_angolensis_palliatus
ENSONIG00000005804	ddb1	100	91.491	ENSCGRG00001016599	Ddb1	100	91.491	Cricetulus_griseus_chok1gshd
ENSONIG00000005804	ddb1	100	91.491	ENSCGRG00000013427	Ddb1	100	91.491	Cricetulus_griseus_crigri
ENSONIG00000005804	ddb1	93	97.926	ENSCSEG00000012499	ddb1	99	96.255	Cynoglossus_semilaevis
ENSONIG00000005804	ddb1	94	97.670	ENSCVAG00000019531	ddb1	99	97.670	Cyprinodon_variegatus
ENSONIG00000005804	ddb1	100	92.382	ENSDARG00000074431	ddb1	100	92.382	Danio_rerio
ENSONIG00000005804	ddb1	94	91.721	ENSDNOG00000014884	DDB1	97	91.721	Dasypus_novemcinctus
ENSONIG00000005804	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSONIG00000005804	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSONIG00000005804	ddb1	77	30.065	FBgn0024698	Cpsf160	67	30.065	Drosophila_melanogaster
ENSONIG00000005804	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSONIG00000005804	ddb1	78	83.802	ENSEBUG00000014593	ddb1	97	83.802	Eptatretus_burgeri
ENSONIG00000005804	ddb1	100	91.491	ENSEASG00005008184	DDB1	100	91.491	Equus_asinus_asinus
ENSONIG00000005804	ddb1	100	91.491	ENSECAG00000012136	DDB1	100	91.491	Equus_caballus
ENSONIG00000005804	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSONIG00000005804	ddb1	100	96.930	ENSELUG00000023868	ddb1	100	96.930	Esox_lucius
ENSONIG00000005804	ddb1	100	91.491	ENSFCAG00000029716	DDB1	100	91.491	Felis_catus
ENSONIG00000005804	ddb1	100	90.639	ENSFALG00000011981	DDB1	100	90.639	Ficedula_albicollis
ENSONIG00000005804	ddb1	100	91.404	ENSFDAG00000005128	DDB1	100	91.404	Fukomys_damarensis
ENSONIG00000005804	ddb1	90	96.903	ENSFHEG00000022133	ddb1	99	96.903	Fundulus_heteroclitus
ENSONIG00000005804	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSONIG00000005804	ddb1	100	91.053	ENSGALG00000042333	DDB1	100	91.053	Gallus_gallus
ENSONIG00000005804	ddb1	94	98.043	ENSGAFG00000013142	ddb1	99	98.043	Gambusia_affinis
ENSONIG00000005804	ddb1	96	97.250	ENSGACG00000017182	ddb1	100	97.250	Gasterosteus_aculeatus
ENSONIG00000005804	ddb1	95	91.052	ENSGAGG00000014124	DDB1	100	91.052	Gopherus_agassizii
ENSONIG00000005804	ddb1	100	91.404	ENSGGOG00000004052	DDB1	100	91.404	Gorilla_gorilla
ENSONIG00000005804	ddb1	100	99.912	ENSHBUG00000008873	ddb1	100	99.912	Haplochromis_burtoni
ENSONIG00000005804	ddb1	100	91.404	ENSHGLG00000018430	DDB1	100	91.404	Heterocephalus_glaber_female
ENSONIG00000005804	ddb1	100	90.439	ENSHGLG00100014475	DDB1	100	90.439	Heterocephalus_glaber_male
ENSONIG00000005804	ddb1	94	98.048	ENSHCOG00000018670	ddb1	98	98.048	Hippocampus_comes
ENSONIG00000005804	ddb1	100	95.877	ENSIPUG00000005612	DDB1	100	95.877	Ictalurus_punctatus
ENSONIG00000005804	ddb1	100	91.404	ENSSTOG00000007552	DDB1	100	91.404	Ictidomys_tridecemlineatus
ENSONIG00000005804	ddb1	100	91.316	ENSJJAG00000017769	Ddb1	100	91.316	Jaculus_jaculus
ENSONIG00000005804	ddb1	94	98.136	ENSKMAG00000002315	ddb1	99	98.136	Kryptolebias_marmoratus
ENSONIG00000005804	ddb1	84	98.855	ENSLBEG00000017065	ddb1	99	98.855	Labrus_bergylta
ENSONIG00000005804	ddb1	100	90.981	ENSLACG00000017611	DDB1	100	90.981	Latimeria_chalumnae
ENSONIG00000005804	ddb1	92	87.784	ENSLOCG00000000012	ddb1	100	87.784	Lepisosteus_oculatus
ENSONIG00000005804	ddb1	100	91.316	ENSLAFG00000011513	DDB1	100	91.316	Loxodonta_africana
ENSONIG00000005804	ddb1	100	91.404	ENSMFAG00000042035	DDB1	100	91.404	Macaca_fascicularis
ENSONIG00000005804	ddb1	99	91.424	ENSMMUG00000002691	DDB1	99	91.424	Macaca_mulatta
ENSONIG00000005804	ddb1	100	91.404	ENSMNEG00000031559	DDB1	100	91.404	Macaca_nemestrina
ENSONIG00000005804	ddb1	100	91.404	ENSMLEG00000044136	DDB1	100	91.404	Mandrillus_leucophaeus
ENSONIG00000005804	ddb1	100	99.123	ENSMAMG00000014372	ddb1	100	99.123	Mastacembelus_armatus
ENSONIG00000005804	ddb1	100	99.825	ENSMZEG00005013835	ddb1	100	99.825	Maylandia_zebra
ENSONIG00000005804	ddb1	94	90.317	ENSMGAG00000004990	DDB1	100	90.317	Meleagris_gallopavo
ENSONIG00000005804	ddb1	100	91.491	ENSMAUG00000012926	Ddb1	100	91.491	Mesocricetus_auratus
ENSONIG00000005804	ddb1	100	91.579	ENSMICG00000013703	DDB1	100	91.579	Microcebus_murinus
ENSONIG00000005804	ddb1	100	91.316	ENSMOCG00000020499	Ddb1	100	91.316	Microtus_ochrogaster
ENSONIG00000005804	ddb1	86	98.980	ENSMMOG00000001758	ddb1	99	98.980	Mola_mola
ENSONIG00000005804	ddb1	100	82.612	ENSMODG00000020353	DDB1	100	82.612	Monodelphis_domestica
ENSONIG00000005804	ddb1	100	98.860	ENSMALG00000014071	ddb1	100	98.860	Monopterus_albus
ENSONIG00000005804	ddb1	100	91.491	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.491	Mus_caroli
ENSONIG00000005804	ddb1	100	91.579	ENSMUSG00000024740	Ddb1	100	91.579	Mus_musculus
ENSONIG00000005804	ddb1	100	91.491	MGP_PahariEiJ_G0014189	Ddb1	100	91.491	Mus_pahari
ENSONIG00000005804	ddb1	100	91.579	MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	Mus_spretus
ENSONIG00000005804	ddb1	100	88.333	ENSMPUG00000014200	DDB1	100	88.333	Mustela_putorius_furo
ENSONIG00000005804	ddb1	100	91.579	ENSMLUG00000013232	DDB1	100	91.579	Myotis_lucifugus
ENSONIG00000005804	ddb1	100	91.404	ENSNGAG00000009384	Ddb1	100	91.404	Nannospalax_galili
ENSONIG00000005804	ddb1	100	99.825	ENSNBRG00000019581	ddb1	100	99.825	Neolamprologus_brichardi
ENSONIG00000005804	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSONIG00000005804	ddb1	90	93.662	ENSMEUG00000001099	DDB1	93	93.662	Notamacropus_eugenii
ENSONIG00000005804	ddb1	90	82.832	ENSOPRG00000008254	DDB1	90	82.832	Ochotona_princeps
ENSONIG00000005804	ddb1	100	91.491	ENSODEG00000002419	DDB1	100	91.491	Octodon_degus
ENSONIG00000005804	ddb1	91	91.279	ENSOANG00000004897	DDB1	100	91.279	Ornithorhynchus_anatinus
ENSONIG00000005804	ddb1	100	91.404	ENSOCUG00000001667	DDB1	100	91.404	Oryctolagus_cuniculus
ENSONIG00000005804	ddb1	96	96.425	ENSORLG00000001399	ddb1	98	97.695	Oryzias_latipes
ENSONIG00000005804	ddb1	96	96.334	ENSORLG00020001277	ddb1	97	96.334	Oryzias_latipes_hni
ENSONIG00000005804	ddb1	94	97.581	ENSORLG00015002080	ddb1	99	97.581	Oryzias_latipes_hsok
ENSONIG00000005804	ddb1	96	96.080	ENSOMEG00000006181	ddb1	99	96.080	Oryzias_melastigma
ENSONIG00000005804	ddb1	100	91.579	ENSOGAG00000016103	DDB1	100	91.579	Otolemur_garnettii
ENSONIG00000005804	ddb1	99	91.630	ENSOARG00000011716	DDB1	98	91.630	Ovis_aries
ENSONIG00000005804	ddb1	100	91.404	ENSPPAG00000035343	DDB1	100	91.404	Pan_paniscus
ENSONIG00000005804	ddb1	100	91.491	ENSPPRG00000013300	DDB1	100	91.491	Panthera_pardus
ENSONIG00000005804	ddb1	98	91.510	ENSPTIG00000006909	DDB1	98	91.510	Panthera_tigris_altaica
ENSONIG00000005804	ddb1	100	91.404	ENSPTRG00000003737	DDB1	100	91.404	Pan_troglodytes
ENSONIG00000005804	ddb1	100	91.404	ENSPANG00000000242	DDB1	100	91.404	Papio_anubis
ENSONIG00000005804	ddb1	94	95.899	ENSPKIG00000019213	ddb1	94	95.899	Paramormyrops_kingsleyae
ENSONIG00000005804	ddb1	98	90.658	ENSPSIG00000013275	DDB1	100	90.658	Pelodiscus_sinensis
ENSONIG00000005804	ddb1	86	98.469	ENSPMGG00000021179	ddb1	99	98.469	Periophthalmus_magnuspinnatus
ENSONIG00000005804	ddb1	100	91.491	ENSPEMG00000012241	Ddb1	100	91.491	Peromyscus_maniculatus_bairdii
ENSONIG00000005804	ddb1	89	86.444	ENSPMAG00000008479	ddb1	100	86.444	Petromyzon_marinus
ENSONIG00000005804	ddb1	100	91.667	ENSPCIG00000002643	DDB1	100	91.667	Phascolarctos_cinereus
ENSONIG00000005804	ddb1	100	98.072	ENSPFOG00000002768	ddb1	100	98.072	Poecilia_formosa
ENSONIG00000005804	ddb1	100	97.895	ENSPLAG00000017227	ddb1	100	97.895	Poecilia_latipinna
ENSONIG00000005804	ddb1	100	97.895	ENSPMEG00000011398	ddb1	100	97.895	Poecilia_mexicana
ENSONIG00000005804	ddb1	94	98.140	ENSPREG00000004440	ddb1	98	98.140	Poecilia_reticulata
ENSONIG00000005804	ddb1	100	87.086	ENSPPYG00000003193	DDB1	100	87.086	Pongo_abelii
ENSONIG00000005804	ddb1	85	89.403	ENSPCAG00000011040	DDB1	85	89.403	Procavia_capensis
ENSONIG00000005804	ddb1	100	90.368	ENSPCOG00000015176	DDB1	100	90.368	Propithecus_coquereli
ENSONIG00000005804	ddb1	100	91.316	ENSPVAG00000003847	DDB1	100	91.316	Pteropus_vampyrus
ENSONIG00000005804	ddb1	94	96.272	ENSPNAG00000006635	ddb1	97	96.272	Pygocentrus_nattereri
ENSONIG00000005804	ddb1	100	91.579	ENSRNOG00000020715	Ddb1	100	91.579	Rattus_norvegicus
ENSONIG00000005804	ddb1	100	91.404	ENSRBIG00000033611	DDB1	100	91.404	Rhinopithecus_bieti
ENSONIG00000005804	ddb1	100	91.404	ENSRROG00000041407	DDB1	100	91.404	Rhinopithecus_roxellana
ENSONIG00000005804	ddb1	100	91.491	ENSSBOG00000019775	DDB1	100	91.491	Saimiri_boliviensis_boliviensis
ENSONIG00000005804	ddb1	94	89.252	ENSSHAG00000011600	DDB1	100	89.252	Sarcophilus_harrisii
ENSONIG00000005804	ddb1	94	96.097	ENSSFOG00015011151	ddb1	97	96.097	Scleropages_formosus
ENSONIG00000005804	ddb1	100	98.509	ENSSMAG00000009495	ddb1	100	98.509	Scophthalmus_maximus
ENSONIG00000005804	ddb1	100	98.947	ENSSDUG00000004642	ddb1	100	98.947	Seriola_dumerili
ENSONIG00000005804	ddb1	100	98.947	ENSSLDG00000015804	ddb1	100	98.947	Seriola_lalandi_dorsalis
ENSONIG00000005804	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSONIG00000005804	ddb1	100	91.140	ENSSPUG00000019338	DDB1	100	91.140	Sphenodon_punctatus
ENSONIG00000005804	ddb1	94	98.605	ENSSPAG00000009888	ddb1	99	98.605	Stegastes_partitus
ENSONIG00000005804	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSONIG00000005804	ddb1	100	90.702	ENSTGUG00000006414	DDB1	100	90.702	Taeniopygia_guttata
ENSONIG00000005804	ddb1	94	97.018	ENSTRUG00000016682	ddb1	98	97.018	Takifugu_rubripes
ENSONIG00000005804	ddb1	88	92.615	ENSTNIG00000009565	ddb1	99	92.615	Tetraodon_nigroviridis
ENSONIG00000005804	ddb1	92	85.770	ENSTTRG00000011055	DDB1	94	85.770	Tursiops_truncatus
ENSONIG00000005804	ddb1	94	91.721	ENSUAMG00000017793	DDB1	93	91.721	Ursus_americanus
ENSONIG00000005804	ddb1	94	91.721	ENSUMAG00000011788	DDB1	98	91.721	Ursus_maritimus
ENSONIG00000005804	ddb1	90	86.891	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSONIG00000005804	ddb1	100	91.491	ENSVVUG00000004987	DDB1	100	91.491	Vulpes_vulpes
ENSONIG00000005804	ddb1	100	88.636	ENSXETG00000008820	ddb1	100	88.636	Xenopus_tropicalis
ENSONIG00000005804	ddb1	86	98.265	ENSXCOG00000013956	ddb1	99	98.265	Xiphophorus_couchianus
ENSONIG00000005804	ddb1	94	98.043	ENSXMAG00000000022	ddb1	99	98.043	Xiphophorus_maculatus