EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000005838 (Gene tree)
Gene ID: -
Gene Symbol: sltm
Alias: -
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 9349 bases
Position: chrGL831150.1:3092241-3101589
Accession: 100711186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007353	RRM_5	PF13893.6	1.3e-08	1	1
ENSONIP00000007354	RRM_5	PF13893.6	1.3e-08	1	1
ENSONIP00000007353	RRM_1	PF00076.22	8.6e-11	1	1
ENSONIP00000007354	RRM_1	PF00076.22	9.5e-11	1	1
ENSONIP00000007354	SAP	PF02037.27	4e-10	1	1
ENSONIP00000007353	SAP	PF02037.27	4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007359	-	3057	-	ENSONIP00000007354	1018 (aa)	-	I3JER3
ENSONIT00000007358	-	3479	-	ENSONIP00000007353	995 (aa)	XP_005467120	I3JER2

Gene Model

Click here to download ENSONIG00000005838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000005838	sltm	73	37.406	ENSONIG00000002318	safb	84	36.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005838	sltm	99	48.019	ENSG00000137776	SLTM	99	52.727	Homo_sapiens
ENSONIG00000005838	sltm	100	83.996	ENSAPOG00000012346	sltm	100	84.127	Acanthochromis_polyacanthus
ENSONIG00000005838	sltm	95	48.246	ENSAMEG00000004537	SLTM	100	47.909	Ailuropoda_melanoleuca
ENSONIG00000005838	sltm	100	88.523	ENSACIG00000001971	sltm	100	88.423	Amphilophus_citrinellus
ENSONIG00000005838	sltm	100	82.694	ENSAOCG00000002747	sltm	100	83.778	Amphiprion_ocellaris
ENSONIG00000005838	sltm	100	82.891	ENSAPEG00000012366	sltm	100	83.976	Amphiprion_percula
ENSONIG00000005838	sltm	100	81.693	ENSATEG00000003763	sltm	100	81.890	Anabas_testudineus
ENSONIG00000005838	sltm	96	49.754	ENSAPLG00000013025	SLTM	100	47.647	Anas_platyrhynchos
ENSONIG00000005838	sltm	99	48.824	ENSACAG00000015120	SLTM	99	47.623	Anolis_carolinensis
ENSONIG00000005838	sltm	99	48.725	ENSANAG00000037031	SLTM	100	48.044	Aotus_nancymaae
ENSONIG00000005838	sltm	100	97.588	ENSACLG00000002523	sltm	100	97.588	Astatotilapia_calliptera
ENSONIG00000005838	sltm	99	60.641	ENSAMXG00000012409	sltm	96	63.663	Astyanax_mexicanus
ENSONIG00000005838	sltm	99	50.967	ENSBTAG00000011319	SLTM	99	51.210	Bos_taurus
ENSONIG00000005838	sltm	99	48.338	ENSCJAG00000020395	SLTM	100	49.060	Callithrix_jacchus
ENSONIG00000005838	sltm	99	49.187	ENSCAFG00000016586	SLTM	100	49.294	Canis_familiaris
ENSONIG00000005838	sltm	87	64.045	ENSCAFG00020011253	SLTM	100	55.172	Canis_lupus_dingo
ENSONIG00000005838	sltm	99	49.905	ENSCHIG00000008780	SLTM	100	49.765	Capra_hircus
ENSONIG00000005838	sltm	94	48.569	ENSTSYG00000013581	SLTM	95	47.954	Carlito_syrichta
ENSONIG00000005838	sltm	91	42.917	ENSCAPG00000013326	SLTM	88	49.160	Cavia_aperea
ENSONIG00000005838	sltm	83	51.247	ENSCPOG00000026109	SLTM	94	52.211	Cavia_porcellus
ENSONIG00000005838	sltm	99	48.718	ENSCCAG00000022982	SLTM	100	47.862	Cebus_capucinus
ENSONIG00000005838	sltm	99	48.859	ENSCATG00000030254	SLTM	100	48.496	Cercocebus_atys
ENSONIG00000005838	sltm	91	47.187	ENSCLAG00000007160	SLTM	99	47.520	Chinchilla_lanigera
ENSONIG00000005838	sltm	99	48.774	ENSCSAG00000012004	SLTM	100	48.416	Chlorocebus_sabaeus
ENSONIG00000005838	sltm	78	52.542	ENSCHOG00000001125	SLTM	90	52.542	Choloepus_hoffmanni
ENSONIG00000005838	sltm	100	50.615	ENSCPBG00000006045	SLTM	98	54.611	Chrysemys_picta_bellii
ENSONIG00000005838	sltm	94	47.764	ENSCANG00000043731	SLTM	100	47.905	Colobus_angolensis_palliatus
ENSONIG00000005838	sltm	98	50.331	ENSCGRG00001022009	Sltm	100	50.093	Cricetulus_griseus_chok1gshd
ENSONIG00000005838	sltm	94	49.411	ENSCGRG00000014806	Sltm	100	49.558	Cricetulus_griseus_crigri
ENSONIG00000005838	sltm	97	70.071	ENSCSEG00000001618	sltm	94	70.552	Cynoglossus_semilaevis
ENSONIG00000005838	sltm	99	64.145	ENSDARG00000052728	sltm	95	71.318	Danio_rerio
ENSONIG00000005838	sltm	99	47.462	ENSDNOG00000002975	SLTM	100	49.120	Dasypus_novemcinctus
ENSONIG00000005838	sltm	76	50.000	ENSDORG00000007463	Sltm	94	49.469	Dipodomys_ordii
ENSONIG00000005838	sltm	55	43.761	ENSETEG00000008003	SLTM	100	42.086	Echinops_telfairi
ENSONIG00000005838	sltm	99	49.811	ENSEASG00005006792	SLTM	100	49.004	Equus_asinus_asinus
ENSONIG00000005838	sltm	99	49.811	ENSECAG00000011267	SLTM	100	49.004	Equus_caballus
ENSONIG00000005838	sltm	86	52.268	ENSEEUG00000000580	SLTM	91	50.791	Erinaceus_europaeus
ENSONIG00000005838	sltm	77	61.827	ENSELUG00000013388	sltm	81	59.457	Esox_lucius
ENSONIG00000005838	sltm	99	50.434	ENSFCAG00000004826	SLTM	100	49.905	Felis_catus
ENSONIG00000005838	sltm	95	49.411	ENSFALG00000012285	SLTM	100	47.886	Ficedula_albicollis
ENSONIG00000005838	sltm	95	48.538	ENSFDAG00000018075	SLTM	100	47.768	Fukomys_damarensis
ENSONIG00000005838	sltm	90	66.114	ENSFHEG00000014764	sltm	100	60.398	Fundulus_heteroclitus
ENSONIG00000005838	sltm	70	82.609	ENSGMOG00000015455	sltm	84	75.000	Gadus_morhua
ENSONIG00000005838	sltm	100	73.143	ENSGACG00000015814	sltm	99	73.333	Gasterosteus_aculeatus
ENSONIG00000005838	sltm	89	65.116	ENSGAGG00000021279	SLTM	91	65.116	Gopherus_agassizii
ENSONIG00000005838	sltm	99	48.099	ENSGGOG00000015866	SLTM	100	48.367	Gorilla_gorilla
ENSONIG00000005838	sltm	100	97.688	ENSHBUG00000012461	sltm	100	97.688	Haplochromis_burtoni
ENSONIG00000005838	sltm	99	48.590	ENSHGLG00000018512	-	99	48.317	Heterocephalus_glaber_female
ENSONIG00000005838	sltm	98	43.457	ENSHGLG00000015426	-	97	43.346	Heterocephalus_glaber_female
ENSONIG00000005838	sltm	99	38.899	ENSHGLG00100002576	-	99	38.623	Heterocephalus_glaber_male
ENSONIG00000005838	sltm	99	43.391	ENSHGLG00100001757	-	99	44.509	Heterocephalus_glaber_male
ENSONIG00000005838	sltm	99	45.042	ENSHGLG00100002674	-	99	46.125	Heterocephalus_glaber_male
ENSONIG00000005838	sltm	100	55.858	ENSHCOG00000003395	sltm	100	53.246	Hippocampus_comes
ENSONIG00000005838	sltm	99	62.389	ENSIPUG00000023201	sltm	92	65.084	Ictalurus_punctatus
ENSONIG00000005838	sltm	95	48.246	ENSSTOG00000000584	SLTM	100	47.764	Ictidomys_tridecemlineatus
ENSONIG00000005838	sltm	100	49.569	ENSJJAG00000006970	Sltm	99	48.513	Jaculus_jaculus
ENSONIG00000005838	sltm	100	71.091	ENSKMAG00000007570	sltm	100	71.232	Kryptolebias_marmoratus
ENSONIG00000005838	sltm	100	73.721	ENSLBEG00000025472	sltm	100	74.129	Labrus_bergylta
ENSONIG00000005838	sltm	100	50.645	ENSLACG00000005234	SLTM	100	49.767	Latimeria_chalumnae
ENSONIG00000005838	sltm	100	59.470	ENSLOCG00000013629	sltm	100	58.563	Lepisosteus_oculatus
ENSONIG00000005838	sltm	99	50.000	ENSLAFG00000017922	SLTM	100	49.953	Loxodonta_africana
ENSONIG00000005838	sltm	99	48.859	ENSMFAG00000033354	SLTM	100	48.587	Macaca_fascicularis
ENSONIG00000005838	sltm	99	48.859	ENSMMUG00000022200	SLTM	100	48.587	Macaca_mulatta
ENSONIG00000005838	sltm	99	48.764	ENSMNEG00000025105	SLTM	100	48.496	Macaca_nemestrina
ENSONIG00000005838	sltm	99	48.585	ENSMLEG00000043355	SLTM	100	48.496	Mandrillus_leucophaeus
ENSONIG00000005838	sltm	100	79.204	ENSMAMG00000021391	sltm	100	79.204	Mastacembelus_armatus
ENSONIG00000005838	sltm	100	97.588	ENSMZEG00005013839	sltm	100	97.588	Maylandia_zebra
ENSONIG00000005838	sltm	96	48.485	ENSMGAG00000005313	SLTM	100	47.847	Meleagris_gallopavo
ENSONIG00000005838	sltm	94	62.500	ENSMAUG00000014391	Sltm	99	59.494	Mesocricetus_auratus
ENSONIG00000005838	sltm	99	48.956	ENSMICG00000013069	SLTM	100	48.501	Microcebus_murinus
ENSONIG00000005838	sltm	99	49.435	ENSMOCG00000012419	Sltm	100	49.813	Microtus_ochrogaster
ENSONIG00000005838	sltm	100	73.695	ENSMMOG00000016470	sltm	100	73.896	Mola_mola
ENSONIG00000005838	sltm	99	50.146	ENSMODG00000008794	-	99	49.519	Monodelphis_domestica
ENSONIG00000005838	sltm	100	80.299	ENSMALG00000021474	sltm	100	80.498	Monopterus_albus
ENSONIG00000005838	sltm	99	48.735	MGP_CAROLIEiJ_G0032404	Sltm	100	49.160	Mus_caroli
ENSONIG00000005838	sltm	98	49.278	ENSMUSG00000032212	Sltm	100	48.926	Mus_musculus
ENSONIG00000005838	sltm	99	48.360	MGP_PahariEiJ_G0015268	Sltm	100	49.160	Mus_pahari
ENSONIG00000005838	sltm	98	49.240	MGP_SPRETEiJ_G0033542	Sltm	100	49.067	Mus_spretus
ENSONIG00000005838	sltm	95	47.588	ENSMPUG00000004229	SLTM	99	46.570	Mustela_putorius_furo
ENSONIG00000005838	sltm	94	49.071	ENSMLUG00000000742	SLTM	100	49.460	Myotis_lucifugus
ENSONIG00000005838	sltm	100	49.720	ENSNGAG00000012328	Sltm	100	49.486	Nannospalax_galili
ENSONIG00000005838	sltm	100	89.950	ENSNBRG00000010183	sltm	100	89.558	Neolamprologus_brichardi
ENSONIG00000005838	sltm	99	48.145	ENSNLEG00000011440	SLTM	100	48.543	Nomascus_leucogenys
ENSONIG00000005838	sltm	90	46.638	ENSMEUG00000015230	SLTM	82	44.349	Notamacropus_eugenii
ENSONIG00000005838	sltm	96	47.969	ENSODEG00000017077	SLTM	99	47.388	Octodon_degus
ENSONIG00000005838	sltm	83	53.571	ENSOCUG00000003327	SLTM	85	50.665	Oryctolagus_cuniculus
ENSONIG00000005838	sltm	100	69.392	ENSORLG00000008161	sltm	100	70.987	Oryzias_latipes
ENSONIG00000005838	sltm	100	68.893	ENSORLG00020008903	sltm	100	70.987	Oryzias_latipes_hni
ENSONIG00000005838	sltm	100	69.492	ENSORLG00015007103	sltm	100	71.087	Oryzias_latipes_hsok
ENSONIG00000005838	sltm	93	70.075	ENSOMEG00000002041	sltm	99	71.706	Oryzias_melastigma
ENSONIG00000005838	sltm	98	48.349	ENSOGAG00000011297	SLTM	100	47.971	Otolemur_garnettii
ENSONIG00000005838	sltm	99	48.323	ENSOARG00000020844	SLTM	99	48.818	Ovis_aries
ENSONIG00000005838	sltm	99	47.897	ENSPPAG00000029308	SLTM	100	48.084	Pan_paniscus
ENSONIG00000005838	sltm	99	49.764	ENSPPRG00000012400	SLTM	100	48.734	Panthera_pardus
ENSONIG00000005838	sltm	95	48.289	ENSPTIG00000021933	SLTM	95	47.950	Panthera_tigris_altaica
ENSONIG00000005838	sltm	99	48.099	ENSPTRG00000007121	SLTM	100	48.408	Pan_troglodytes
ENSONIG00000005838	sltm	99	47.664	ENSPANG00000017193	SLTM	100	47.441	Papio_anubis
ENSONIG00000005838	sltm	93	70.000	ENSPKIG00000022760	sltm	100	62.988	Paramormyrops_kingsleyae
ENSONIG00000005838	sltm	99	49.811	ENSPSIG00000005489	SLTM	99	49.765	Pelodiscus_sinensis
ENSONIG00000005838	sltm	75	67.062	ENSPMGG00000006037	sltm	100	61.039	Periophthalmus_magnuspinnatus
ENSONIG00000005838	sltm	99	48.966	ENSPEMG00000013263	Sltm	99	49.581	Peromyscus_maniculatus_bairdii
ENSONIG00000005838	sltm	98	49.309	ENSPCIG00000028356	SLTM	99	48.548	Phascolarctos_cinereus
ENSONIG00000005838	sltm	99	73.118	ENSPFOG00000004372	sltm	100	70.356	Poecilia_formosa
ENSONIG00000005838	sltm	100	69.930	ENSPLAG00000008000	sltm	100	70.356	Poecilia_latipinna
ENSONIG00000005838	sltm	100	69.661	ENSPMEG00000006047	sltm	100	70.385	Poecilia_mexicana
ENSONIG00000005838	sltm	100	70.000	ENSPREG00000023236	sltm	100	69.931	Poecilia_reticulata
ENSONIG00000005838	sltm	99	47.170	ENSPPYG00000006515	SLTM	100	47.245	Pongo_abelii
ENSONIG00000005838	sltm	99	44.850	ENSPCAG00000013482	SLTM	99	44.278	Procavia_capensis
ENSONIG00000005838	sltm	99	49.668	ENSPCOG00000010624	SLTM	100	48.135	Propithecus_coquereli
ENSONIG00000005838	sltm	98	48.004	ENSPVAG00000015056	SLTM	100	46.570	Pteropus_vampyrus
ENSONIG00000005838	sltm	100	97.889	ENSPNYG00000013893	sltm	100	97.889	Pundamilia_nyererei
ENSONIG00000005838	sltm	99	63.085	ENSPNAG00000020563	sltm	98	66.535	Pygocentrus_nattereri
ENSONIG00000005838	sltm	98	48.906	ENSRNOG00000054446	Sltm	99	48.833	Rattus_norvegicus
ENSONIG00000005838	sltm	95	49.000	ENSRBIG00000029226	SLTM	99	49.149	Rhinopithecus_bieti
ENSONIG00000005838	sltm	99	49.804	ENSRROG00000045301	SLTM	100	48.813	Rhinopithecus_roxellana
ENSONIG00000005838	sltm	99	49.662	ENSSBOG00000018883	SLTM	100	49.053	Saimiri_boliviensis_boliviensis
ENSONIG00000005838	sltm	95	50.049	ENSSHAG00000015395	SLTM	99	49.406	Sarcophilus_harrisii
ENSONIG00000005838	sltm	100	76.651	ENSSMAG00000000355	sltm	100	76.938	Scophthalmus_maximus
ENSONIG00000005838	sltm	100	81.195	ENSSDUG00000018134	sltm	100	82.336	Seriola_dumerili
ENSONIG00000005838	sltm	100	81.391	ENSSLDG00000013907	sltm	100	82.237	Seriola_lalandi_dorsalis
ENSONIG00000005838	sltm	100	80.851	ENSSPAG00000008130	sltm	100	81.818	Stegastes_partitus
ENSONIG00000005838	sltm	87	64.045	ENSSSCG00000004592	SLTM	99	49.275	Sus_scrofa
ENSONIG00000005838	sltm	91	50.214	ENSTGUG00000006017	SLTM	96	47.336	Taeniopygia_guttata
ENSONIG00000005838	sltm	87	65.906	ENSTRUG00000017767	sltm	90	67.768	Takifugu_rubripes
ENSONIG00000005838	sltm	99	59.730	ENSTNIG00000009334	sltm	100	61.441	Tetraodon_nigroviridis
ENSONIG00000005838	sltm	91	48.770	ENSTBEG00000000945	SLTM	87	48.934	Tupaia_belangeri
ENSONIG00000005838	sltm	99	48.744	ENSTTRG00000005246	SLTM	99	48.229	Tursiops_truncatus
ENSONIG00000005838	sltm	82	52.409	ENSUAMG00000025901	SLTM	99	53.237	Ursus_americanus
ENSONIG00000005838	sltm	96	48.438	ENSUMAG00000023678	SLTM	99	52.878	Ursus_maritimus
ENSONIG00000005838	sltm	95	48.350	ENSVPAG00000008606	SLTM	100	48.279	Vicugna_pacos
ENSONIG00000005838	sltm	98	49.383	ENSVVUG00000001450	SLTM	100	49.438	Vulpes_vulpes
ENSONIG00000005838	sltm	60	44.976	ENSXETG00000010840	sltm	99	45.238	Xenopus_tropicalis
ENSONIG00000005838	sltm	100	69.431	ENSXMAG00000014466	sltm	100	70.020	Xiphophorus_maculatus