EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000005901 (Gene tree)
Gene ID: 100694601
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9286 bases
Position: chrGL831178.1:2907501-2916786
Accession: 100694601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007427	Beta-Casp	PF10996.8	4.4e-21	1	1
ENSONIP00000007427	Lactamase_B	PF00753.27	8.4e-06	1	1
ENSONIP00000007427	RMMBL	PF07521.12	5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007432	-	3356	-	ENSONIP00000007427	787 (aa)	XP_003446332	I3JEY6

Gene Model

Click here to download ENSONIG00000005901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000005901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000005901	cpsf2	100	86.058	ENSG00000165934	CPSF2	100	86.250	Homo_sapiens
ENSONIG00000005901	cpsf2	100	96.061	ENSAPOG00000001242	cpsf2	100	96.061	Acanthochromis_polyacanthus
ENSONIG00000005901	cpsf2	100	97.081	ENSACIG00000009331	cpsf2	100	97.081	Amphilophus_citrinellus
ENSONIG00000005901	cpsf2	100	96.188	ENSAOCG00000014095	cpsf2	100	96.188	Amphiprion_ocellaris
ENSONIG00000005901	cpsf2	100	96.188	ENSAPEG00000009158	cpsf2	100	96.188	Amphiprion_percula
ENSONIG00000005901	cpsf2	96	94.063	ENSATEG00000017644	cpsf2	99	93.792	Anabas_testudineus
ENSONIG00000005901	cpsf2	100	85.823	ENSAPLG00000006330	CPSF2	100	85.823	Anas_platyrhynchos
ENSONIG00000005901	cpsf2	100	85.551	ENSACAG00000009245	CPSF2	100	85.551	Anolis_carolinensis
ENSONIG00000005901	cpsf2	100	86.185	ENSANAG00000022915	CPSF2	100	86.185	Aotus_nancymaae
ENSONIG00000005901	cpsf2	100	90.114	ENSAMXG00000018696	cpsf2	100	90.114	Astyanax_mexicanus
ENSONIG00000005901	cpsf2	100	86.185	ENSBTAG00000010227	CPSF2	100	86.185	Bos_taurus
ENSONIG00000005901	cpsf2	100	41.647	WBGene00017313	cpsf-2	100	41.784	Caenorhabditis_elegans
ENSONIG00000005901	cpsf2	100	86.185	ENSCJAG00000018069	CPSF2	100	86.185	Callithrix_jacchus
ENSONIG00000005901	cpsf2	100	86.058	ENSCAFG00000010909	CPSF2	100	86.058	Canis_familiaris
ENSONIG00000005901	cpsf2	100	86.058	ENSCAFG00020020670	CPSF2	100	86.058	Canis_lupus_dingo
ENSONIG00000005901	cpsf2	100	86.185	ENSCHIG00000023848	CPSF2	100	86.185	Capra_hircus
ENSONIG00000005901	cpsf2	100	86.058	ENSTSYG00000009036	CPSF2	100	86.058	Carlito_syrichta
ENSONIG00000005901	cpsf2	100	86.185	ENSCPOG00000010899	CPSF2	100	86.185	Cavia_porcellus
ENSONIG00000005901	cpsf2	100	86.185	ENSCCAG00000028088	CPSF2	100	86.185	Cebus_capucinus
ENSONIG00000005901	cpsf2	100	86.185	ENSCATG00000030132	CPSF2	100	86.185	Cercocebus_atys
ENSONIG00000005901	cpsf2	100	86.185	ENSCLAG00000012404	CPSF2	100	86.185	Chinchilla_lanigera
ENSONIG00000005901	cpsf2	100	86.185	ENSCSAG00000011300	CPSF2	100	86.185	Chlorocebus_sabaeus
ENSONIG00000005901	cpsf2	100	80.355	ENSCHOG00000012904	CPSF2	100	80.355	Choloepus_hoffmanni
ENSONIG00000005901	cpsf2	100	85.678	ENSCPBG00000008766	CPSF2	97	85.678	Chrysemys_picta_bellii
ENSONIG00000005901	cpsf2	100	53.317	ENSCING00000007881	-	100	52.826	Ciona_intestinalis
ENSONIG00000005901	cpsf2	98	83.721	ENSCANG00000041651	CPSF2	100	86.468	Colobus_angolensis_palliatus
ENSONIG00000005901	cpsf2	100	85.678	ENSCGRG00001006901	Cpsf2	100	85.678	Cricetulus_griseus_chok1gshd
ENSONIG00000005901	cpsf2	100	85.678	ENSCGRG00000012416	Cpsf2	100	85.678	Cricetulus_griseus_crigri
ENSONIG00000005901	cpsf2	100	93.020	ENSCSEG00000004116	cpsf2	100	93.020	Cynoglossus_semilaevis
ENSONIG00000005901	cpsf2	100	93.647	ENSCVAG00000000095	cpsf2	100	93.647	Cyprinodon_variegatus
ENSONIG00000005901	cpsf2	100	88.734	ENSDARG00000028971	cpsf2	100	88.734	Danio_rerio
ENSONIG00000005901	cpsf2	100	86.185	ENSDNOG00000042757	CPSF2	100	86.185	Dasypus_novemcinctus
ENSONIG00000005901	cpsf2	100	86.185	ENSDORG00000013709	Cpsf2	100	86.185	Dipodomys_ordii
ENSONIG00000005901	cpsf2	100	53.646	FBgn0027873	Cpsf100	100	53.160	Drosophila_melanogaster
ENSONIG00000005901	cpsf2	100	78.354	ENSETEG00000012123	CPSF2	100	78.354	Echinops_telfairi
ENSONIG00000005901	cpsf2	52	77.262	ENSEBUG00000012098	cpsf2	93	77.262	Eptatretus_burgeri
ENSONIG00000005901	cpsf2	89	90.785	ENSEASG00005021193	CPSF2	100	90.785	Equus_asinus_asinus
ENSONIG00000005901	cpsf2	100	86.058	ENSECAG00000023935	CPSF2	100	86.058	Equus_caballus
ENSONIG00000005901	cpsf2	100	88.945	ENSELUG00000008442	cpsf2	100	88.945	Esox_lucius
ENSONIG00000005901	cpsf2	100	86.058	ENSFCAG00000007886	CPSF2	100	86.058	Felis_catus
ENSONIG00000005901	cpsf2	100	85.787	ENSFALG00000002412	CPSF2	100	85.787	Ficedula_albicollis
ENSONIG00000005901	cpsf2	100	86.058	ENSFDAG00000006327	CPSF2	100	86.058	Fukomys_damarensis
ENSONIG00000005901	cpsf2	96	91.623	ENSFHEG00000015465	cpsf2	98	92.398	Fundulus_heteroclitus
ENSONIG00000005901	cpsf2	100	89.773	ENSGMOG00000008761	cpsf2	100	89.773	Gadus_morhua
ENSONIG00000005901	cpsf2	100	86.675	ENSGALG00000010783	CPSF2	100	86.675	Gallus_gallus
ENSONIG00000005901	cpsf2	100	93.774	ENSGAFG00000001407	cpsf2	100	93.774	Gambusia_affinis
ENSONIG00000005901	cpsf2	100	94.282	ENSGACG00000008418	cpsf2	100	94.282	Gasterosteus_aculeatus
ENSONIG00000005901	cpsf2	100	85.551	ENSGAGG00000008287	CPSF2	100	85.551	Gopherus_agassizii
ENSONIG00000005901	cpsf2	100	86.058	ENSGGOG00000011799	CPSF2	100	86.058	Gorilla_gorilla
ENSONIG00000005901	cpsf2	100	98.221	ENSHBUG00000023466	cpsf2	100	98.221	Haplochromis_burtoni
ENSONIG00000005901	cpsf2	100	86.185	ENSHGLG00000018311	CPSF2	100	86.185	Heterocephalus_glaber_female
ENSONIG00000005901	cpsf2	100	86.185	ENSHGLG00100016460	CPSF2	100	86.185	Heterocephalus_glaber_male
ENSONIG00000005901	cpsf2	100	92.884	ENSHCOG00000019527	cpsf2	98	92.884	Hippocampus_comes
ENSONIG00000005901	cpsf2	100	90.748	ENSIPUG00000020857	cpsf2	100	90.748	Ictalurus_punctatus
ENSONIG00000005901	cpsf2	100	86.185	ENSSTOG00000009528	CPSF2	100	86.185	Ictidomys_tridecemlineatus
ENSONIG00000005901	cpsf2	100	85.932	ENSJJAG00000017925	Cpsf2	100	85.932	Jaculus_jaculus
ENSONIG00000005901	cpsf2	100	93.011	ENSKMAG00000019429	cpsf2	100	93.011	Kryptolebias_marmoratus
ENSONIG00000005901	cpsf2	95	93.298	ENSLBEG00000011585	cpsf2	100	93.298	Labrus_bergylta
ENSONIG00000005901	cpsf2	100	84.264	ENSLACG00000019024	CPSF2	100	84.411	Latimeria_chalumnae
ENSONIG00000005901	cpsf2	100	89.254	ENSLOCG00000014102	cpsf2	100	89.254	Lepisosteus_oculatus
ENSONIG00000005901	cpsf2	100	85.841	ENSLAFG00000004891	CPSF2	100	85.841	Loxodonta_africana
ENSONIG00000005901	cpsf2	100	86.185	ENSMFAG00000041212	CPSF2	100	86.185	Macaca_fascicularis
ENSONIG00000005901	cpsf2	100	86.185	ENSMMUG00000000699	CPSF2	100	86.185	Macaca_mulatta
ENSONIG00000005901	cpsf2	100	86.185	ENSMNEG00000031584	CPSF2	100	86.185	Macaca_nemestrina
ENSONIG00000005901	cpsf2	100	86.185	ENSMLEG00000029394	CPSF2	100	86.185	Mandrillus_leucophaeus
ENSONIG00000005901	cpsf2	100	95.299	ENSMAMG00000004235	cpsf2	100	95.299	Mastacembelus_armatus
ENSONIG00000005901	cpsf2	100	98.348	ENSMZEG00005001769	cpsf2	100	98.348	Maylandia_zebra
ENSONIG00000005901	cpsf2	100	86.439	ENSMGAG00000013122	CPSF2	100	86.439	Meleagris_gallopavo
ENSONIG00000005901	cpsf2	100	85.678	ENSMAUG00000015160	Cpsf2	100	85.678	Mesocricetus_auratus
ENSONIG00000005901	cpsf2	100	86.185	ENSMICG00000016441	CPSF2	100	86.185	Microcebus_murinus
ENSONIG00000005901	cpsf2	100	85.678	ENSMOCG00000015372	Cpsf2	100	85.678	Microtus_ochrogaster
ENSONIG00000005901	cpsf2	100	88.310	ENSMMOG00000015590	cpsf2	100	88.310	Mola_mola
ENSONIG00000005901	cpsf2	100	86.185	ENSMODG00000002042	CPSF2	100	86.185	Monodelphis_domestica
ENSONIG00000005901	cpsf2	100	91.105	ENSMALG00000022275	cpsf2	100	91.105	Monopterus_albus
ENSONIG00000005901	cpsf2	100	85.678	ENSMUSG00000041781	Cpsf2	100	85.678	Mus_musculus
ENSONIG00000005901	cpsf2	100	85.551	MGP_PahariEiJ_G0029791	Cpsf2	100	85.551	Mus_pahari
ENSONIG00000005901	cpsf2	100	85.678	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.678	Mus_spretus
ENSONIG00000005901	cpsf2	100	86.312	ENSMPUG00000007617	CPSF2	98	86.312	Mustela_putorius_furo
ENSONIG00000005901	cpsf2	100	86.058	ENSMLUG00000005570	CPSF2	100	86.058	Myotis_lucifugus
ENSONIG00000005901	cpsf2	100	85.932	ENSNGAG00000020312	Cpsf2	100	85.932	Nannospalax_galili
ENSONIG00000005901	cpsf2	100	98.856	ENSNBRG00000022402	cpsf2	100	98.856	Neolamprologus_brichardi
ENSONIG00000005901	cpsf2	100	85.298	ENSNLEG00000017132	CPSF2	100	85.298	Nomascus_leucogenys
ENSONIG00000005901	cpsf2	91	93.528	ENSMEUG00000008138	CPSF2	91	93.528	Notamacropus_eugenii
ENSONIG00000005901	cpsf2	86	89.535	ENSOPRG00000008484	-	92	89.535	Ochotona_princeps
ENSONIG00000005901	cpsf2	100	85.932	ENSODEG00000008682	CPSF2	100	85.932	Octodon_degus
ENSONIG00000005901	cpsf2	100	86.565	ENSOANG00000003822	CPSF2	100	86.565	Ornithorhynchus_anatinus
ENSONIG00000005901	cpsf2	100	85.932	ENSOCUG00000005713	CPSF2	100	85.932	Oryctolagus_cuniculus
ENSONIG00000005901	cpsf2	100	86.912	ENSORLG00000011628	cpsf2	100	86.912	Oryzias_latipes
ENSONIG00000005901	cpsf2	100	92.503	ENSORLG00020016980	cpsf2	100	92.503	Oryzias_latipes_hni
ENSONIG00000005901	cpsf2	100	92.503	ENSORLG00015011910	cpsf2	100	92.503	Oryzias_latipes_hsok
ENSONIG00000005901	cpsf2	100	92.766	ENSOMEG00000022876	cpsf2	100	92.893	Oryzias_melastigma
ENSONIG00000005901	cpsf2	100	83.186	ENSOARG00000012889	CPSF2	100	83.186	Ovis_aries
ENSONIG00000005901	cpsf2	100	86.058	ENSPPAG00000039666	CPSF2	100	86.058	Pan_paniscus
ENSONIG00000005901	cpsf2	99	86.041	ENSPPRG00000010869	CPSF2	100	86.041	Panthera_pardus
ENSONIG00000005901	cpsf2	100	86.058	ENSPTIG00000021202	CPSF2	100	86.058	Panthera_tigris_altaica
ENSONIG00000005901	cpsf2	100	86.058	ENSPTRG00000006651	CPSF2	100	86.058	Pan_troglodytes
ENSONIG00000005901	cpsf2	100	86.185	ENSPANG00000017417	CPSF2	100	86.185	Papio_anubis
ENSONIG00000005901	cpsf2	100	85.298	ENSPKIG00000021453	cpsf2	100	85.298	Paramormyrops_kingsleyae
ENSONIG00000005901	cpsf2	100	85.171	ENSPSIG00000006289	CPSF2	100	85.171	Pelodiscus_sinensis
ENSONIG00000005901	cpsf2	76	87.188	ENSPMGG00000002511	cpsf2	99	88.167	Periophthalmus_magnuspinnatus
ENSONIG00000005901	cpsf2	100	85.805	ENSPEMG00000007917	Cpsf2	100	85.805	Peromyscus_maniculatus_bairdii
ENSONIG00000005901	cpsf2	100	72.773	ENSPMAG00000006205	cpsf2	100	73.149	Petromyzon_marinus
ENSONIG00000005901	cpsf2	100	86.185	ENSPCIG00000011393	CPSF2	100	86.185	Phascolarctos_cinereus
ENSONIG00000005901	cpsf2	100	93.774	ENSPFOG00000018648	cpsf2	100	93.774	Poecilia_formosa
ENSONIG00000005901	cpsf2	100	93.774	ENSPLAG00000019199	cpsf2	99	93.774	Poecilia_latipinna
ENSONIG00000005901	cpsf2	96	93.668	ENSPMEG00000012100	cpsf2	100	93.566	Poecilia_mexicana
ENSONIG00000005901	cpsf2	100	93.393	ENSPREG00000008960	cpsf2	100	93.393	Poecilia_reticulata
ENSONIG00000005901	cpsf2	64	82.107	ENSPPYG00000029685	-	100	82.107	Pongo_abelii
ENSONIG00000005901	cpsf2	100	86.058	ENSPCAG00000012477	CPSF2	100	86.058	Procavia_capensis
ENSONIG00000005901	cpsf2	100	86.312	ENSPCOG00000026387	CPSF2	100	86.312	Propithecus_coquereli
ENSONIG00000005901	cpsf2	64	91.837	ENSPVAG00000004223	CPSF2	65	91.837	Pteropus_vampyrus
ENSONIG00000005901	cpsf2	100	97.970	ENSPNYG00000023356	cpsf2	100	97.970	Pundamilia_nyererei
ENSONIG00000005901	cpsf2	100	91.381	ENSPNAG00000001849	cpsf2	100	91.381	Pygocentrus_nattereri
ENSONIG00000005901	cpsf2	100	85.678	ENSRNOG00000005733	Cpsf2	100	85.678	Rattus_norvegicus
ENSONIG00000005901	cpsf2	100	86.185	ENSRBIG00000044792	CPSF2	100	86.185	Rhinopithecus_bieti
ENSONIG00000005901	cpsf2	100	86.185	ENSRROG00000034875	CPSF2	100	86.185	Rhinopithecus_roxellana
ENSONIG00000005901	cpsf2	100	86.185	ENSSBOG00000024571	CPSF2	100	86.185	Saimiri_boliviensis_boliviensis
ENSONIG00000005901	cpsf2	100	86.185	ENSSHAG00000010458	CPSF2	100	86.185	Sarcophilus_harrisii
ENSONIG00000005901	cpsf2	100	91.381	ENSSFOG00015002117	cpsf2	100	91.635	Scleropages_formosus
ENSONIG00000005901	cpsf2	100	93.147	ENSSMAG00000002001	cpsf2	100	93.909	Scophthalmus_maximus
ENSONIG00000005901	cpsf2	100	95.807	ENSSDUG00000004084	cpsf2	100	95.807	Seriola_dumerili
ENSONIG00000005901	cpsf2	100	95.426	ENSSLDG00000024330	cpsf2	100	95.426	Seriola_lalandi_dorsalis
ENSONIG00000005901	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSONIG00000005901	cpsf2	100	85.551	ENSSPUG00000013485	CPSF2	100	85.551	Sphenodon_punctatus
ENSONIG00000005901	cpsf2	100	95.426	ENSSPAG00000013284	cpsf2	100	95.426	Stegastes_partitus
ENSONIG00000005901	cpsf2	100	85.932	ENSSSCG00000002447	CPSF2	100	85.932	Sus_scrofa
ENSONIG00000005901	cpsf2	100	85.914	ENSTGUG00000012571	-	100	85.914	Taeniopygia_guttata
ENSONIG00000005901	cpsf2	100	92.884	ENSTRUG00000003742	cpsf2	100	92.884	Takifugu_rubripes
ENSONIG00000005901	cpsf2	100	91.635	ENSTNIG00000012228	cpsf2	100	92.649	Tetraodon_nigroviridis
ENSONIG00000005901	cpsf2	91	84.058	ENSTBEG00000004530	CPSF2	94	84.058	Tupaia_belangeri
ENSONIG00000005901	cpsf2	88	84.769	ENSTTRG00000008697	CPSF2	88	84.769	Tursiops_truncatus
ENSONIG00000005901	cpsf2	100	86.185	ENSUAMG00000028071	CPSF2	100	86.185	Ursus_americanus
ENSONIG00000005901	cpsf2	100	86.185	ENSUMAG00000005029	CPSF2	99	90.821	Ursus_maritimus
ENSONIG00000005901	cpsf2	99	86.041	ENSVPAG00000003503	CPSF2	100	86.041	Vicugna_pacos
ENSONIG00000005901	cpsf2	100	86.058	ENSVVUG00000024642	CPSF2	100	86.058	Vulpes_vulpes
ENSONIG00000005901	cpsf2	100	84.810	ENSXETG00000010289	cpsf2	100	84.810	Xenopus_tropicalis
ENSONIG00000005901	cpsf2	100	93.647	ENSXCOG00000001764	cpsf2	100	93.647	Xiphophorus_couchianus
ENSONIG00000005901	cpsf2	100	94.028	ENSXMAG00000017048	cpsf2	100	94.028	Xiphophorus_maculatus