EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000006054 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: -
Full Name: zgc:153215
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1710 bases
Position: chrGL831229.1:681439-683148
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007624	RRM_1	PF00076.22	4.1e-23	1	2
ENSONIP00000007624	RRM_1	PF00076.22	4.1e-23	2	2
ENSONIP00000007625	RRM_1	PF00076.22	4.9e-23	1	2
ENSONIP00000007625	RRM_1	PF00076.22	4.9e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007630	-	1608	-	ENSONIP00000007625	536 (aa)	-	I3JFI4
ENSONIT00000007629	-	1560	-	ENSONIP00000007624	519 (aa)	-	I3JFI3

Gene Model

Click here to download ENSONIG00000006054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000006054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000006054	zgc:153215	92	56.000	ENSAPOG00000008836	zgc:153215	97	56.000	Acanthochromis_polyacanthus
ENSONIG00000006054	zgc:153215	99	69.173	ENSACIG00000013317	zgc:153215	99	69.656	Amphilophus_citrinellus
ENSONIG00000006054	zgc:153215	84	47.727	ENSACIG00000014943	rbm12b	96	47.727	Amphilophus_citrinellus
ENSONIG00000006054	zgc:153215	100	55.009	ENSAOCG00000010819	zgc:153215	99	55.009	Amphiprion_ocellaris
ENSONIG00000006054	zgc:153215	99	30.798	ENSAPEG00000022079	rbm12b	67	30.798	Amphiprion_percula
ENSONIG00000006054	zgc:153215	100	54.905	ENSATEG00000001886	zgc:153215	99	55.766	Anabas_testudineus
ENSONIG00000006054	zgc:153215	99	31.667	ENSACLG00000005578	rbm12b	100	39.231	Astatotilapia_calliptera
ENSONIG00000006054	zgc:153215	100	90.787	ENSACLG00000007675	zgc:153215	100	90.787	Astatotilapia_calliptera
ENSONIG00000006054	zgc:153215	84	52.747	ENSAMXG00000020853	zgc:153215	88	37.903	Astyanax_mexicanus
ENSONIG00000006054	zgc:153215	78	47.666	ENSCSEG00000001575	-	99	47.666	Cynoglossus_semilaevis
ENSONIG00000006054	zgc:153215	87	66.667	ENSCVAG00000009259	-	99	66.667	Cyprinodon_variegatus
ENSONIG00000006054	zgc:153215	99	40.074	ENSDARG00000055889	zgc:153215	99	40.000	Danio_rerio
ENSONIG00000006054	zgc:153215	100	40.823	ENSELUG00000009039	zgc:153215	97	40.823	Esox_lucius
ENSONIG00000006054	zgc:153215	77	69.231	ENSFHEG00000014539	zgc:153215	95	69.231	Fundulus_heteroclitus
ENSONIG00000006054	zgc:153215	99	31.676	ENSGMOG00000013467	rbm12b	74	31.676	Gadus_morhua
ENSONIG00000006054	zgc:153215	100	30.826	ENSGALG00000035129	RBM12B	72	30.826	Gallus_gallus
ENSONIG00000006054	zgc:153215	98	47.184	ENSGAFG00000007845	zgc:153215	98	47.184	Gambusia_affinis
ENSONIG00000006054	zgc:153215	100	89.046	ENSHBUG00000016150	zgc:153215	99	89.046	Haplochromis_burtoni
ENSONIG00000006054	zgc:153215	100	37.338	ENSIPUG00000019731	zgc:153215	99	37.338	Ictalurus_punctatus
ENSONIG00000006054	zgc:153215	100	50.838	ENSKMAG00000004958	zgc:153215	99	51.487	Kryptolebias_marmoratus
ENSONIG00000006054	zgc:153215	100	54.876	ENSLBEG00000002597	zgc:153215	99	55.364	Labrus_bergylta
ENSONIG00000006054	zgc:153215	99	32.156	ENSLOCG00000018344	rbm12b	74	31.970	Lepisosteus_oculatus
ENSONIG00000006054	zgc:153215	100	56.915	ENSMAMG00000012038	zgc:153215	99	56.915	Mastacembelus_armatus
ENSONIG00000006054	zgc:153215	100	88.693	ENSMZEG00005005435	zgc:153215	99	88.693	Maylandia_zebra
ENSONIG00000006054	zgc:153215	100	30.642	ENSMGAG00000011985	RBM12B	98	30.642	Meleagris_gallopavo
ENSONIG00000006054	zgc:153215	95	58.427	ENSMMOG00000003372	zgc:153215	99	58.427	Mola_mola
ENSONIG00000006054	zgc:153215	85	43.182	ENSMMOG00000002404	rbm12b	69	43.182	Mola_mola
ENSONIG00000006054	zgc:153215	100	30.018	ENSMODG00000007436	RBM12B	65	30.018	Monodelphis_domestica
ENSONIG00000006054	zgc:153215	99	54.615	ENSMALG00000001222	zgc:153215	99	54.615	Monopterus_albus
ENSONIG00000006054	zgc:153215	100	88.869	ENSNBRG00000013644	zgc:153215	99	88.869	Neolamprologus_brichardi
ENSONIG00000006054	zgc:153215	84	67.073	ENSOMEG00000004220	zgc:153215	92	66.304	Oryzias_melastigma
ENSONIG00000006054	zgc:153215	99	34.758	ENSPKIG00000014851	zgc:153215	99	34.758	Paramormyrops_kingsleyae
ENSONIG00000006054	zgc:153215	100	31.481	ENSPKIG00000018719	rbm12b	73	31.481	Paramormyrops_kingsleyae
ENSONIG00000006054	zgc:153215	99	30.370	ENSPSIG00000001348	RBM12B	72	30.370	Pelodiscus_sinensis
ENSONIG00000006054	zgc:153215	100	53.846	ENSPFOG00000017451	zgc:153215	95	54.198	Poecilia_formosa
ENSONIG00000006054	zgc:153215	89	52.727	ENSPLAG00000000232	zgc:153215	93	66.197	Poecilia_latipinna
ENSONIG00000006054	zgc:153215	92	66.250	ENSPMEG00000016662	zgc:153215	99	66.250	Poecilia_mexicana
ENSONIG00000006054	zgc:153215	99	47.238	ENSPREG00000018608	zgc:153215	99	47.238	Poecilia_reticulata
ENSONIG00000006054	zgc:153215	99	73.563	ENSPNYG00000018125	zgc:153215	96	80.672	Pundamilia_nyererei
ENSONIG00000006054	zgc:153215	99	37.545	ENSPNAG00000025628	zgc:153215	99	37.545	Pygocentrus_nattereri
ENSONIG00000006054	zgc:153215	99	30.550	ENSPNAG00000008126	rbm12b	72	30.492	Pygocentrus_nattereri
ENSONIG00000006054	zgc:153215	100	30.203	ENSSHAG00000015335	RBM12B	67	30.203	Sarcophilus_harrisii
ENSONIG00000006054	zgc:153215	100	40.228	ENSSFOG00015009427	zgc:153215	99	40.228	Scleropages_formosus
ENSONIG00000006054	zgc:153215	100	31.860	ENSSFOG00015001584	rbm12b	74	32.270	Scleropages_formosus
ENSONIG00000006054	zgc:153215	100	54.080	ENSSMAG00000019013	zgc:153215	97	54.080	Scophthalmus_maximus
ENSONIG00000006054	zgc:153215	100	58.712	ENSSDUG00000012545	zgc:153215	99	58.712	Seriola_dumerili
ENSONIG00000006054	zgc:153215	100	58.549	ENSSLDG00000013581	zgc:153215	98	58.549	Seriola_lalandi_dorsalis
ENSONIG00000006054	zgc:153215	100	48.000	ENSSPAG00000023584	zgc:153215	98	47.810	Stegastes_partitus
ENSONIG00000006054	zgc:153215	79	50.000	ENSTNIG00000018374	-	99	50.000	Tetraodon_nigroviridis
ENSONIG00000006054	zgc:153215	92	39.535	ENSXETG00000014696	rbm12b	67	39.535	Xenopus_tropicalis
ENSONIG00000006054	zgc:153215	88	41.228	ENSXETG00000014694	rbm12b	99	41.228	Xenopus_tropicalis
ENSONIG00000006054	zgc:153215	85	37.975	ENSXETG00000025920	-	95	37.975	Xenopus_tropicalis
ENSONIG00000006054	zgc:153215	99	47.692	ENSXCOG00000019654	zgc:153215	98	47.692	Xiphophorus_couchianus
ENSONIG00000006054	zgc:153215	94	41.322	ENSXMAG00000013169	-	94	53.165	Xiphophorus_maculatus