EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000006067 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 16131 bases
Position: chrGL831229.1:742833-758963
Accession: 100695049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007642	ResIII	PF04851.15	7.7e-10	1	1
ENSONIP00000007641	ResIII	PF04851.15	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007647	-	2742	-	ENSONIP00000007642	913 (aa)	-	I3JFK1
ENSONIT00000007646	-	4881	XM_005472738	ENSONIP00000007641	928 (aa)	XP_005472795	I3JFK0

Gene Model

Click here to download ENSONIG00000006067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000006067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000006067	rad54b	50	31.452	ENSONIG00000015059	smarcad1a	52	31.619
ENSONIG00000006067	rad54b	74	43.615	ENSONIG00000007659	rad54l	89	43.615
ENSONIG00000006067	rad54b	58	34.061	ENSONIG00000013166	hells	60	33.613
ENSONIG00000006067	rad54b	58	30.626	ENSONIG00000015139	ercc6l2	83	30.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000006067	rad54b	99	54.595	ENSG00000197275	RAD54B	99	54.595	Homo_sapiens
ENSONIG00000006067	rad54b	80	58.413	ENSG00000265817	FSBP	99	58.413	Homo_sapiens
ENSONIG00000006067	rad54b	99	55.011	ENSAMEG00000005834	-	99	55.011	Ailuropoda_melanoleuca
ENSONIG00000006067	rad54b	100	87.733	ENSACIG00000013005	rad54b	97	92.079	Amphilophus_citrinellus
ENSONIG00000006067	rad54b	100	86.281	ENSAOCG00000008523	rad54b	100	86.388	Amphiprion_ocellaris
ENSONIG00000006067	rad54b	100	78.261	ENSAPEG00000001673	rad54b	100	78.261	Amphiprion_percula
ENSONIG00000006067	rad54b	100	84.797	ENSATEG00000001527	rad54b	100	85.011	Anabas_testudineus
ENSONIG00000006067	rad54b	99	58.099	ENSAPLG00000014366	-	99	58.099	Anas_platyrhynchos
ENSONIG00000006067	rad54b	86	60.203	ENSACAG00000003671	-	98	60.203	Anolis_carolinensis
ENSONIG00000006067	rad54b	71	59.938	ENSANAG00000019528	-	99	59.938	Aotus_nancymaae
ENSONIG00000006067	rad54b	100	90.909	ENSACLG00000007826	rad54b	99	97.143	Astatotilapia_calliptera
ENSONIG00000006067	rad54b	86	69.504	ENSAMXG00000039985	rad54b	94	68.892	Astyanax_mexicanus
ENSONIG00000006067	rad54b	99	55.032	ENSBTAG00000000632	RAD54B	99	55.032	Bos_taurus
ENSONIG00000006067	rad54b	85	32.943	WBGene00013792	Y116A8C.13	86	34.363	Caenorhabditis_elegans
ENSONIG00000006067	rad54b	99	55.184	ENSCJAG00000000080	-	99	58.276	Callithrix_jacchus
ENSONIG00000006067	rad54b	99	55.822	ENSCAFG00000009179	RAD54B	99	55.822	Canis_familiaris
ENSONIG00000006067	rad54b	99	55.822	ENSCAFG00020012084	-	99	55.822	Canis_lupus_dingo
ENSONIG00000006067	rad54b	99	55.043	ENSCHIG00000008230	-	99	55.043	Capra_hircus
ENSONIG00000006067	rad54b	99	55.423	ENSTSYG00000013234	-	99	55.423	Carlito_syrichta
ENSONIG00000006067	rad54b	99	55.128	ENSCPOG00000011643	-	99	55.128	Cavia_porcellus
ENSONIG00000006067	rad54b	99	54.984	ENSCCAG00000011754	-	99	58.187	Cebus_capucinus
ENSONIG00000006067	rad54b	99	54.684	ENSCATG00000030661	-	99	58.630	Cercocebus_atys
ENSONIG00000006067	rad54b	99	54.703	ENSCLAG00000010476	-	99	54.703	Chinchilla_lanigera
ENSONIG00000006067	rad54b	99	54.713	ENSCSAG00000012712	-	99	54.713	Chlorocebus_sabaeus
ENSONIG00000006067	rad54b	99	58.217	ENSCPBG00000003204	-	98	59.742	Chrysemys_picta_bellii
ENSONIG00000006067	rad54b	99	55.038	ENSCANG00000017939	-	99	58.767	Colobus_angolensis_palliatus
ENSONIG00000006067	rad54b	99	54.386	ENSCGRG00001020184	Rad54b	99	54.386	Cricetulus_griseus_chok1gshd
ENSONIG00000006067	rad54b	99	53.289	ENSCGRG00000016752	Rad54b	99	53.289	Cricetulus_griseus_crigri
ENSONIG00000006067	rad54b	95	83.753	ENSCSEG00000001601	rad54b	99	83.753	Cynoglossus_semilaevis
ENSONIG00000006067	rad54b	100	79.431	ENSCVAG00000009200	rad54b	100	79.431	Cyprinodon_variegatus
ENSONIG00000006067	rad54b	99	62.778	ENSDARG00000092134	rad54b	99	70.000	Danio_rerio
ENSONIG00000006067	rad54b	99	55.921	ENSDNOG00000015535	-	99	55.921	Dasypus_novemcinctus
ENSONIG00000006067	rad54b	99	55.390	ENSDORG00000002492	Rad54b	99	55.390	Dipodomys_ordii
ENSONIG00000006067	rad54b	87	57.249	ENSETEG00000010605	-	100	57.249	Echinops_telfairi
ENSONIG00000006067	rad54b	99	46.806	ENSEBUG00000009104	rad54b	98	46.960	Eptatretus_burgeri
ENSONIG00000006067	rad54b	89	58.525	ENSEASG00005004021	-	93	58.525	Equus_asinus_asinus
ENSONIG00000006067	rad54b	99	55.724	ENSECAG00000021949	-	99	55.724	Equus_caballus
ENSONIG00000006067	rad54b	72	54.658	ENSEEUG00000008056	-	72	54.658	Erinaceus_europaeus
ENSONIG00000006067	rad54b	100	73.248	ENSELUG00000009287	rad54b	100	73.355	Esox_lucius
ENSONIG00000006067	rad54b	99	55.447	ENSFCAG00000015513	-	99	59.781	Felis_catus
ENSONIG00000006067	rad54b	99	57.771	ENSFALG00000005467	-	99	57.771	Ficedula_albicollis
ENSONIG00000006067	rad54b	99	55.135	ENSFDAG00000020541	-	100	55.135	Fukomys_damarensis
ENSONIG00000006067	rad54b	88	82.099	ENSFHEG00000014382	rad54b	91	81.862	Fundulus_heteroclitus
ENSONIG00000006067	rad54b	86	81.944	ENSGMOG00000014774	rad54b	99	81.944	Gadus_morhua
ENSONIG00000006067	rad54b	99	58.405	ENSGALG00000043597	RAD54B	99	58.405	Gallus_gallus
ENSONIG00000006067	rad54b	99	82.799	ENSGAFG00000007901	rad54b	99	83.673	Gambusia_affinis
ENSONIG00000006067	rad54b	99	80.000	ENSGACG00000009128	rad54b	99	80.000	Gasterosteus_aculeatus
ENSONIG00000006067	rad54b	99	58.486	ENSGAGG00000018747	-	99	58.486	Gopherus_agassizii
ENSONIG00000006067	rad54b	99	54.713	ENSGGOG00000023516	-	99	54.713	Gorilla_gorilla
ENSONIG00000006067	rad54b	100	97.522	ENSHBUG00000016017	rad54b	99	97.522	Haplochromis_burtoni
ENSONIG00000006067	rad54b	99	54.516	ENSHGLG00000008263	RAD54B	99	54.516	Heterocephalus_glaber_female
ENSONIG00000006067	rad54b	99	53.739	ENSHGLG00100008108	-	99	53.739	Heterocephalus_glaber_male
ENSONIG00000006067	rad54b	99	72.905	ENSHCOG00000004764	rad54b	98	76.332	Hippocampus_comes
ENSONIG00000006067	rad54b	99	62.487	ENSIPUG00000018531	rad54b	99	62.487	Ictalurus_punctatus
ENSONIG00000006067	rad54b	99	53.618	ENSSTOG00000010791	-	99	53.618	Ictidomys_tridecemlineatus
ENSONIG00000006067	rad54b	99	54.162	ENSJJAG00000010314	Rad54b	99	54.162	Jaculus_jaculus
ENSONIG00000006067	rad54b	89	87.500	ENSKMAG00000004744	rad54b	94	87.500	Kryptolebias_marmoratus
ENSONIG00000006067	rad54b	82	64.096	ENSLACG00000000859	-	100	64.096	Latimeria_chalumnae
ENSONIG00000006067	rad54b	99	63.713	ENSLOCG00000010100	rad54b	94	69.202	Lepisosteus_oculatus
ENSONIG00000006067	rad54b	86	57.557	ENSLAFG00000015315	-	97	57.557	Loxodonta_africana
ENSONIG00000006067	rad54b	99	54.713	ENSMFAG00000031629	-	99	58.630	Macaca_fascicularis
ENSONIG00000006067	rad54b	99	54.713	ENSMMUG00000005659	-	99	54.713	Macaca_mulatta
ENSONIG00000006067	rad54b	99	54.555	ENSMNEG00000016408	-	99	54.555	Macaca_nemestrina
ENSONIG00000006067	rad54b	99	54.605	ENSMLEG00000006946	-	99	54.605	Mandrillus_leucophaeus
ENSONIG00000006067	rad54b	100	79.891	ENSMAMG00000012269	rad54b	99	79.891	Mastacembelus_armatus
ENSONIG00000006067	rad54b	100	97.522	ENSMZEG00005005281	rad54b	100	97.522	Maylandia_zebra
ENSONIG00000006067	rad54b	99	58.145	ENSMGAG00000012024	-	99	58.145	Meleagris_gallopavo
ENSONIG00000006067	rad54b	99	54.276	ENSMAUG00000013586	Rad54b	99	54.276	Mesocricetus_auratus
ENSONIG00000006067	rad54b	90	56.686	ENSMICG00000000754	-	96	56.686	Microcebus_murinus
ENSONIG00000006067	rad54b	99	53.821	ENSMOCG00000020035	Rad54b	99	53.821	Microtus_ochrogaster
ENSONIG00000006067	rad54b	99	80.022	ENSMMOG00000003394	rad54b	99	80.022	Mola_mola
ENSONIG00000006067	rad54b	86	59.114	ENSMODG00000007343	-	97	59.114	Monodelphis_domestica
ENSONIG00000006067	rad54b	70	87.539	ENSMALG00000001520	rad54b	100	87.539	Monopterus_albus
ENSONIG00000006067	rad54b	99	54.203	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.203	Mus_caroli
ENSONIG00000006067	rad54b	99	53.664	ENSMUSG00000078773	Rad54b	99	53.664	Mus_musculus
ENSONIG00000006067	rad54b	99	54.338	MGP_PahariEiJ_G0023933	Rad54b	99	54.338	Mus_pahari
ENSONIG00000006067	rad54b	99	54.095	MGP_SPRETEiJ_G0026758	Rad54b	99	54.095	Mus_spretus
ENSONIG00000006067	rad54b	86	59.572	ENSMPUG00000008878	-	97	59.572	Mustela_putorius_furo
ENSONIG00000006067	rad54b	99	55.580	ENSMLUG00000008953	-	99	55.580	Myotis_lucifugus
ENSONIG00000006067	rad54b	99	54.171	ENSNGAG00000017537	Rad54b	99	54.171	Nannospalax_galili
ENSONIG00000006067	rad54b	100	91.457	ENSNBRG00000013394	rad54b	99	97.516	Neolamprologus_brichardi
ENSONIG00000006067	rad54b	99	54.329	ENSNLEG00000003062	-	99	58.140	Nomascus_leucogenys
ENSONIG00000006067	rad54b	70	61.381	ENSMEUG00000012426	-	69	61.381	Notamacropus_eugenii
ENSONIG00000006067	rad54b	79	75.000	ENSODEG00000002650	-	97	75.000	Octodon_degus
ENSONIG00000006067	rad54b	99	54.984	ENSODEG00000019564	-	99	54.984	Octodon_degus
ENSONIG00000006067	rad54b	82	59.684	ENSOANG00000011348	-	99	59.684	Ornithorhynchus_anatinus
ENSONIG00000006067	rad54b	99	54.951	ENSOCUG00000016478	-	99	54.951	Oryctolagus_cuniculus
ENSONIG00000006067	rad54b	100	81.683	ENSORLG00000008918	rad54b	100	88.527	Oryzias_latipes
ENSONIG00000006067	rad54b	70	88.372	ENSORLG00020012171	rad54b	100	88.372	Oryzias_latipes_hni
ENSONIG00000006067	rad54b	100	81.356	ENSORLG00015018536	rad54b	100	81.356	Oryzias_latipes_hsok
ENSONIG00000006067	rad54b	85	86.528	ENSOMEG00000004345	rad54b	100	86.528	Oryzias_melastigma
ENSONIG00000006067	rad54b	99	54.298	ENSOGAG00000007854	-	99	54.298	Otolemur_garnettii
ENSONIG00000006067	rad54b	86	60.477	ENSOARG00000007691	-	97	60.477	Ovis_aries
ENSONIG00000006067	rad54b	99	53.556	ENSPPAG00000029572	-	99	53.556	Pan_paniscus
ENSONIG00000006067	rad54b	99	55.338	ENSPPRG00000007571	-	99	59.644	Panthera_pardus
ENSONIG00000006067	rad54b	80	59.781	ENSPTIG00000012670	-	99	59.781	Panthera_tigris_altaica
ENSONIG00000006067	rad54b	99	54.703	ENSPTRG00000020427	-	99	58.413	Pan_troglodytes
ENSONIG00000006067	rad54b	99	54.713	ENSPANG00000019566	-	99	54.713	Papio_anubis
ENSONIG00000006067	rad54b	99	64.856	ENSPKIG00000014974	rad54b	99	64.856	Paramormyrops_kingsleyae
ENSONIG00000006067	rad54b	99	57.019	ENSPSIG00000002383	-	99	59.831	Pelodiscus_sinensis
ENSONIG00000006067	rad54b	99	54.664	ENSPEMG00000012133	Rad54b	99	54.664	Peromyscus_maniculatus_bairdii
ENSONIG00000006067	rad54b	86	58.660	ENSPMAG00000002916	rad54b	98	58.734	Petromyzon_marinus
ENSONIG00000006067	rad54b	89	57.966	ENSPCIG00000020151	-	93	57.966	Phascolarctos_cinereus
ENSONIG00000006067	rad54b	99	82.623	ENSPFOG00000023411	rad54b	99	82.585	Poecilia_formosa
ENSONIG00000006067	rad54b	99	82.409	ENSPLAG00000010430	rad54b	99	82.372	Poecilia_latipinna
ENSONIG00000006067	rad54b	99	82.799	ENSPMEG00000016873	rad54b	99	84.091	Poecilia_mexicana
ENSONIG00000006067	rad54b	99	82.836	ENSPREG00000018443	rad54b	99	85.036	Poecilia_reticulata
ENSONIG00000006067	rad54b	99	55.135	ENSPPYG00000018750	-	99	55.135	Pongo_abelii
ENSONIG00000006067	rad54b	99	54.968	ENSPCOG00000026845	-	99	58.413	Propithecus_coquereli
ENSONIG00000006067	rad54b	81	58.133	ENSPVAG00000000261	-	86	58.133	Pteropus_vampyrus
ENSONIG00000006067	rad54b	87	94.332	ENSPNYG00000018303	rad54b	97	94.332	Pundamilia_nyererei
ENSONIG00000006067	rad54b	99	63.675	ENSPNAG00000000295	rad54b	99	63.675	Pygocentrus_nattereri
ENSONIG00000006067	rad54b	99	54.329	ENSRNOG00000039949	Rad54b	99	54.625	Rattus_norvegicus
ENSONIG00000006067	rad54b	99	54.575	ENSRBIG00000020419	-	99	54.575	Rhinopithecus_bieti
ENSONIG00000006067	rad54b	99	54.575	ENSRROG00000039897	-	99	54.575	Rhinopithecus_roxellana
ENSONIG00000006067	rad54b	80	36.398	YBR073W	RDH54	80	36.940	Saccharomyces_cerevisiae
ENSONIG00000006067	rad54b	99	55.184	ENSSBOG00000028501	-	99	55.184	Saimiri_boliviensis_boliviensis
ENSONIG00000006067	rad54b	99	55.266	ENSSHAG00000017038	-	99	55.266	Sarcophilus_harrisii
ENSONIG00000006067	rad54b	62	71.831	ENSSFOG00015008483	rad54b	89	71.831	Scleropages_formosus
ENSONIG00000006067	rad54b	99	83.351	ENSSMAG00000018659	rad54b	99	85.500	Scophthalmus_maximus
ENSONIG00000006067	rad54b	97	85.777	ENSSDUG00000001122	rad54b	96	85.777	Seriola_dumerili
ENSONIG00000006067	rad54b	100	86.123	ENSSLDG00000013787	rad54b	100	86.123	Seriola_lalandi_dorsalis
ENSONIG00000006067	rad54b	99	56.880	ENSSPUG00000016497	-	99	56.880	Sphenodon_punctatus
ENSONIG00000006067	rad54b	100	83.734	ENSSPAG00000012800	rad54b	100	83.734	Stegastes_partitus
ENSONIG00000006067	rad54b	99	54.821	ENSSSCG00000006101	-	98	59.446	Sus_scrofa
ENSONIG00000006067	rad54b	99	57.553	ENSTGUG00000011880	-	99	57.553	Taeniopygia_guttata
ENSONIG00000006067	rad54b	100	79.025	ENSTRUG00000010015	rad54b	99	79.025	Takifugu_rubripes
ENSONIG00000006067	rad54b	99	51.282	ENSTTRG00000006312	-	99	51.282	Tursiops_truncatus
ENSONIG00000006067	rad54b	99	54.951	ENSUMAG00000016401	-	99	54.793	Ursus_maritimus
ENSONIG00000006067	rad54b	99	55.027	ENSVPAG00000003157	-	99	55.027	Vicugna_pacos
ENSONIG00000006067	rad54b	99	47.883	ENSXETG00000025924	rad54b	98	53.141	Xenopus_tropicalis
ENSONIG00000006067	rad54b	97	84.815	ENSXMAG00000013141	rad54b	99	84.815	Xiphophorus_maculatus