EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000006247 (Gene tree)
Gene ID
100706793
Gene Symbol
puf60b
Alias
-
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Plus strand
Length
8597 bases
Position
chrGL831138.1:4056541-4065137
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000007870RRM_1PF00076.221.3e-4412
ENSONIP00000007870RRM_1PF00076.221.3e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000007875-1584-ENSONIP00000007870527 (aa)-I3JG79
Gene Model
Click here to download ENSONIG00000006247's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000006247's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000006247puf60b9983.142ENSONIG00000014030-9983.142
ENSONIG00000006247puf60b5535.294ENSONIG00000012793u2af2a6037.255
ENSONIG00000006247puf60b5137.255ENSONIG00000009682-6237.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000006247puf60b9984.659ENSG00000179950PUF6010085.413Homo_sapiens
ENSONIG00000006247puf60b9997.333ENSAPOG00000001713puf60b9997.688Acanthochromis_polyacanthus
ENSONIG00000006247puf60b9982.576ENSAMEG00000006406PUF609482.386Ailuropoda_melanoleuca
ENSONIG00000006247puf60b9777.821ENSACIG00000003263-9978.210Amphilophus_citrinellus
ENSONIG00000006247puf60b97100.000ENSACIG00000021705puf60b100100.000Amphilophus_citrinellus
ENSONIG00000006247puf60b9883.462ENSAOCG00000015558-9984.038Amphiprion_ocellaris
ENSONIG00000006247puf60b9897.688ENSAOCG00000005395puf60b10097.856Amphiprion_ocellaris
ENSONIG00000006247puf60b9774.419ENSAPEG00000001836-9975.530Amphiprion_percula
ENSONIG00000006247puf60b9991.810ENSAPEG00000011923puf60b9991.810Amphiprion_percula
ENSONIG00000006247puf60b9881.923ENSATEG00000006303-9982.885Anabas_testudineus
ENSONIG00000006247puf60b9998.470ENSATEG00000001730puf60b9998.470Anabas_testudineus
ENSONIG00000006247puf60b9885.389ENSAPLG00000010150PUF6010085.389Anas_platyrhynchos
ENSONIG00000006247puf60b9884.848ENSACAG00000001645PUF609784.848Anolis_carolinensis
ENSONIG00000006247puf60b9984.470ENSANAG00000018626PUF6010085.221Aotus_nancymaae
ENSONIG00000006247puf60b97100.000ENSACLG00000004462puf60b100100.000Astatotilapia_calliptera
ENSONIG00000006247puf60b9781.973ENSAMXG00000041030puf60b10082.543Astyanax_mexicanus
ENSONIG00000006247puf60b9886.415ENSAMXG00000036570puf60a10083.272Astyanax_mexicanus
ENSONIG00000006247puf60b9984.848ENSBTAG00000037493PUF6010084.717Bos_taurus
ENSONIG00000006247puf60b8249.216WBGene00004389rnp-68950.774Caenorhabditis_elegans
ENSONIG00000006247puf60b9984.659ENSCJAG00000021485PUF609884.630Callithrix_jacchus
ENSONIG00000006247puf60b9984.280ENSCAFG00000001400PUF609384.280Canis_familiaris
ENSONIG00000006247puf60b9984.659ENSCAFG00020018754PUF609884.630Canis_lupus_dingo
ENSONIG00000006247puf60b9984.848ENSCHIG00000001618PUF608784.848Capra_hircus
ENSONIG00000006247puf60b9984.848ENSTSYG00000011912PUF6010085.413Carlito_syrichta
ENSONIG00000006247puf60b9980.075ENSCPOG00000014613PUF609480.075Cavia_porcellus
ENSONIG00000006247puf60b9984.848ENSCCAG00000007744PUF609884.820Cebus_capucinus
ENSONIG00000006247puf60b9984.659ENSCATG00000035405PUF609884.630Cercocebus_atys
ENSONIG00000006247puf60b9984.848ENSCLAG00000009154PUF609384.848Chinchilla_lanigera
ENSONIG00000006247puf60b9785.413ENSCSAG00000008878PUF6010085.413Chlorocebus_sabaeus
ENSONIG00000006247puf60b9884.571ENSCPBG00000005595PUF609884.630Chrysemys_picta_bellii
ENSONIG00000006247puf60b6258.944ENSCING00000002156-8858.944Ciona_intestinalis
ENSONIG00000006247puf60b9848.571ENSCING00000008436-9847.646Ciona_intestinalis
ENSONIG00000006247puf60b9548.600ENSCSAVG00000004765-9748.200Ciona_savignyi
ENSONIG00000006247puf60b9554.095ENSCSAVG00000001385-9953.743Ciona_savignyi
ENSONIG00000006247puf60b7984.834ENSCANG00000041843PUF6010084.834Colobus_angolensis_palliatus
ENSONIG00000006247puf60b9985.038ENSCGRG00001017442Puf609385.038Cricetulus_griseus_chok1gshd
ENSONIG00000006247puf60b9985.038ENSCGRG00000003717Puf609385.038Cricetulus_griseus_crigri
ENSONIG00000006247puf60b9876.190ENSCSEG00000014845-9077.333Cynoglossus_semilaevis
ENSONIG00000006247puf60b9897.688ENSCSEG00000019887puf60b9397.688Cynoglossus_semilaevis
ENSONIG00000006247puf60b9797.661ENSCVAG00000009386puf60b10097.661Cyprinodon_variegatus
ENSONIG00000006247puf60b8981.838ENSCVAG00000001560-9881.410Cyprinodon_variegatus
ENSONIG00000006247puf60b9787.476ENSDARG00000032175puf60a9992.340Danio_rerio
ENSONIG00000006247puf60b9782.163ENSDARG00000001241puf60b9998.413Danio_rerio
ENSONIG00000006247puf60b9671.012ENSDNOG00000043278PUF609071.012Dasypus_novemcinctus
ENSONIG00000006247puf60b9985.038ENSDORG00000004585Puf609585.038Dipodomys_ordii
ENSONIG00000006247puf60b8363.103FBgn0028577hfp9948.754Drosophila_melanogaster
ENSONIG00000006247puf60b9569.522ENSEBUG00000005470-9267.110Eptatretus_burgeri
ENSONIG00000006247puf60b9759.291ENSEBUG00000014291puf60b8461.630Eptatretus_burgeri
ENSONIG00000006247puf60b9984.659ENSEASG00005009695PUF609884.630Equus_asinus_asinus
ENSONIG00000006247puf60b9984.659ENSECAG00000024681PUF609784.630Equus_caballus
ENSONIG00000006247puf60b9888.314ENSELUG00000018443-9988.145Esox_lucius
ENSONIG00000006247puf60b10087.222ENSELUG00000006507puf60b9985.846Esox_lucius
ENSONIG00000006247puf60b9984.659ENSFCAG00000001045PUF6010085.413Felis_catus
ENSONIG00000006247puf60b9975.660ENSFALG00000001136PUF609976.038Ficedula_albicollis
ENSONIG00000006247puf60b9984.848ENSFDAG00000017177PUF609384.848Fukomys_damarensis
ENSONIG00000006247puf60b9382.485ENSFHEG00000021687PUF6010083.402Fundulus_heteroclitus
ENSONIG00000006247puf60b9898.073ENSFHEG00000020046puf60b10098.051Fundulus_heteroclitus
ENSONIG00000006247puf60b9882.443ENSGMOG00000006392puf60b10082.061Gadus_morhua
ENSONIG00000006247puf60b6489.213ENSGALG00000039901PUF609489.213Gallus_gallus
ENSONIG00000006247puf60b9780.583ENSGAFG00000004334-9981.109Gambusia_affinis
ENSONIG00000006247puf60b9897.881ENSGAFG00000021040puf60b10097.856Gambusia_affinis
ENSONIG00000006247puf60b9873.025ENSGACG00000001484-10071.984Gasterosteus_aculeatus
ENSONIG00000006247puf60b9884.778ENSGACG00000004717puf60b9884.778Gasterosteus_aculeatus
ENSONIG00000006247puf60b9884.571ENSGAGG00000013289PUF609284.630Gopherus_agassizii
ENSONIG00000006247puf60b9984.659ENSGGOG00000004646PUF609884.630Gorilla_gorilla
ENSONIG00000006247puf60b9883.462ENSHBUG00000009634-9983.462Haplochromis_burtoni
ENSONIG00000006247puf60b98100.000ENSHBUG00000015118puf60b100100.000Haplochromis_burtoni
ENSONIG00000006247puf60b9984.848ENSHGLG00000006111PUF609384.848Heterocephalus_glaber_female
ENSONIG00000006247puf60b9984.848ENSHGLG00100012362PUF609384.848Heterocephalus_glaber_male
ENSONIG00000006247puf60b9667.255ENSHCOG00000000378-9966.102Hippocampus_comes
ENSONIG00000006247puf60b9892.509ENSHCOG00000015541puf60b10093.258Hippocampus_comes
ENSONIG00000006247puf60b9782.576ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSONIG00000006247puf60b9785.221ENSIPUG00000002453puf60a9985.029Ictalurus_punctatus
ENSONIG00000006247puf60b9984.848ENSSTOG00000025037PUF609484.848Ictidomys_tridecemlineatus
ENSONIG00000006247puf60b9985.038ENSJJAG00000001076Puf609385.038Jaculus_jaculus
ENSONIG00000006247puf60b9798.246ENSKMAG00000016745puf60b10098.246Kryptolebias_marmoratus
ENSONIG00000006247puf60b9777.735ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSONIG00000006247puf60b9894.412ENSLBEG00000012505puf60b10094.412Labrus_bergylta
ENSONIG00000006247puf60b6878.804ENSLACG00000005456PUF609978.378Latimeria_chalumnae
ENSONIG00000006247puf60b9988.337ENSLOCG00000010106puf60b9988.484Lepisosteus_oculatus
ENSONIG00000006247puf60b9983.902ENSLAFG00000022929PUF609483.902Loxodonta_africana
ENSONIG00000006247puf60b9984.659ENSMFAG00000043373PUF609984.369Macaca_fascicularis
ENSONIG00000006247puf60b9984.659ENSMMUG00000013558PUF609884.630Macaca_mulatta
ENSONIG00000006247puf60b9984.659ENSMNEG00000031099PUF609884.630Macaca_nemestrina
ENSONIG00000006247puf60b9785.413ENSMLEG00000040009PUF6010085.413Mandrillus_leucophaeus
ENSONIG00000006247puf60b9883.301ENSMAMG00000019476-9983.685Mastacembelus_armatus
ENSONIG00000006247puf60b9896.532ENSMAMG00000010394puf60b10093.928Mastacembelus_armatus
ENSONIG00000006247puf60b9883.462ENSMZEG00005019425-9983.462Maylandia_zebra
ENSONIG00000006247puf60b97100.000ENSMZEG00005018515puf60b100100.000Maylandia_zebra
ENSONIG00000006247puf60b9885.389ENSMGAG00000013070PUF609589.535Meleagris_gallopavo
ENSONIG00000006247puf60b6888.011ENSMAUG00000014267-9088.011Mesocricetus_auratus
ENSONIG00000006247puf60b9368.254ENSMAUG00000018549-9568.515Mesocricetus_auratus
ENSONIG00000006247puf60b9984.659ENSMICG00000012226PUF609984.630Microcebus_murinus
ENSONIG00000006247puf60b9985.038ENSMOCG00000018780Puf609485.038Microtus_ochrogaster
ENSONIG00000006247puf60b9973.106ENSMMOG00000018059-9976.147Mola_mola
ENSONIG00000006247puf60b9798.051ENSMMOG00000004217puf60b10098.051Mola_mola
ENSONIG00000006247puf60b9984.470ENSMODG00000009161PUF609584.470Monodelphis_domestica
ENSONIG00000006247puf60b9882.115ENSMALG00000000200-9982.115Monopterus_albus
ENSONIG00000006247puf60b9990.403ENSMALG00000006797puf60b9990.403Monopterus_albus
ENSONIG00000006247puf60b9985.417MGP_CAROLIEiJ_G0019910Puf609385.417Mus_caroli
ENSONIG00000006247puf60b9985.417ENSMUSG00000002524Puf609385.417Mus_musculus
ENSONIG00000006247puf60b9985.417MGP_PahariEiJ_G0019920Puf609385.417Mus_pahari
ENSONIG00000006247puf60b9985.417MGP_SPRETEiJ_G0020812Puf609385.417Mus_spretus
ENSONIG00000006247puf60b9984.470ENSMPUG00000008137PUF609384.470Mustela_putorius_furo
ENSONIG00000006247puf60b9878.368ENSMLUG00000013032-9878.368Myotis_lucifugus
ENSONIG00000006247puf60b9984.280ENSMLUG00000000238-9484.280Myotis_lucifugus
ENSONIG00000006247puf60b9985.038ENSNGAG00000000712Puf6010085.797Nannospalax_galili
ENSONIG00000006247puf60b9883.462ENSNBRG00000017223-9983.462Neolamprologus_brichardi
ENSONIG00000006247puf60b8297.285ENSNBRG00000013047puf60b9799.281Neolamprologus_brichardi
ENSONIG00000006247puf60b9984.659ENSNLEG00000002156PUF609884.630Nomascus_leucogenys
ENSONIG00000006247puf60b7094.224ENSOPRG00000002147PUF607294.224Ochotona_princeps
ENSONIG00000006247puf60b7188.761ENSODEG00000014024-9088.761Octodon_degus
ENSONIG00000006247puf60b9563.492ENSODEG00000015513-9762.089Octodon_degus
ENSONIG00000006247puf60b9671.006ENSOANG00000006962PUF609970.809Ornithorhynchus_anatinus
ENSONIG00000006247puf60b9896.917ENSORLG00000012279puf60b10097.076Oryzias_latipes
ENSONIG00000006247puf60b9781.923ENSORLG00000028655-9982.081Oryzias_latipes
ENSONIG00000006247puf60b9896.917ENSORLG00020007333puf6010097.076Oryzias_latipes_hni
ENSONIG00000006247puf60b9882.534ENSORLG00020018144-9882.534Oryzias_latipes_hni
ENSONIG00000006247puf60b9896.545ENSORLG00015007718puf60b10096.699Oryzias_latipes_hsok
ENSONIG00000006247puf60b9882.500ENSORLG00015016833-9882.500Oryzias_latipes_hsok
ENSONIG00000006247puf60b9894.528ENSOMEG00000001643puf60b9994.528Oryzias_melastigma
ENSONIG00000006247puf60b9982.567ENSOMEG00000022185-9882.500Oryzias_melastigma
ENSONIG00000006247puf60b9984.848ENSOGAG00000006259PUF609484.848Otolemur_garnettii
ENSONIG00000006247puf60b9983.144ENSOARG00000016235PUF609983.144Ovis_aries
ENSONIG00000006247puf60b9984.659ENSPPAG00000029933PUF609984.181Pan_paniscus
ENSONIG00000006247puf60b9984.659ENSPPRG00000003257PUF6010085.413Panthera_pardus
ENSONIG00000006247puf60b9981.439ENSPTIG00000009795PUF609982.353Panthera_tigris_altaica
ENSONIG00000006247puf60b9984.659ENSPTRG00000020670PUF609984.181Pan_troglodytes
ENSONIG00000006247puf60b9984.659ENSPTRG00000043963-9884.630Pan_troglodytes
ENSONIG00000006247puf60b9984.659ENSPANG00000021936PUF609884.630Papio_anubis
ENSONIG00000006247puf60b9889.101ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSONIG00000006247puf60b9889.981ENSPKIG00000012204puf60b10090.838Paramormyrops_kingsleyae
ENSONIG00000006247puf60b9984.398ENSPSIG00000004679PUF6010084.398Pelodiscus_sinensis
ENSONIG00000006247puf60b9895.367ENSPMGG00000013444puf60b10095.367Periophthalmus_magnuspinnatus
ENSONIG00000006247puf60b9985.038ENSPEMG00000008820Puf609385.038Peromyscus_maniculatus_bairdii
ENSONIG00000006247puf60b9984.848ENSPCIG00000020270PUF609984.952Phascolarctos_cinereus
ENSONIG00000006247puf60b9898.073ENSPFOG00000019217puf60b9994.626Poecilia_formosa
ENSONIG00000006247puf60b9881.574ENSPFOG00000011118-9981.958Poecilia_formosa
ENSONIG00000006247puf60b9798.051ENSPLAG00000010754puf60b10098.051Poecilia_latipinna
ENSONIG00000006247puf60b9881.958ENSPLAG00000017025-9181.958Poecilia_latipinna
ENSONIG00000006247puf60b9898.073ENSPMEG00000000838puf60b10098.051Poecilia_mexicana
ENSONIG00000006247puf60b9881.766ENSPMEG00000009767-9182.150Poecilia_mexicana
ENSONIG00000006247puf60b9895.497ENSPREG00000005440puf60b9995.497Poecilia_reticulata
ENSONIG00000006247puf60b7983.175ENSPPYG00000018951-9583.175Pongo_abelii
ENSONIG00000006247puf60b7984.597ENSPCAG00000014837PUF6010084.597Procavia_capensis
ENSONIG00000006247puf60b9984.470ENSPCOG00000027981PUF609984.440Propithecus_coquereli
ENSONIG00000006247puf60b9796.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSONIG00000006247puf60b9883.462ENSPNYG00000004273-9983.462Pundamilia_nyererei
ENSONIG00000006247puf60b97100.000ENSPNYG00000002556puf60b100100.000Pundamilia_nyererei
ENSONIG00000006247puf60b9880.116ENSPNAG00000019415puf60b9079.730Pygocentrus_nattereri
ENSONIG00000006247puf60b9885.029ENSPNAG00000019909puf60a9985.249Pygocentrus_nattereri
ENSONIG00000006247puf60b9985.417ENSRNOG00000009960Puf609385.417Rattus_norvegicus
ENSONIG00000006247puf60b9984.659ENSRBIG00000035274PUF609884.630Rhinopithecus_bieti
ENSONIG00000006247puf60b9984.659ENSRROG00000029360PUF609984.630Rhinopithecus_roxellana
ENSONIG00000006247puf60b9983.333ENSSBOG00000027089PUF609883.302Saimiri_boliviensis_boliviensis
ENSONIG00000006247puf60b8984.034ENSSHAG00000006668PUF609084.034Sarcophilus_harrisii
ENSONIG00000006247puf60b9782.659ENSSFOG00015019619puf60b9985.366Scleropages_formosus
ENSONIG00000006247puf60b9389.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSONIG00000006247puf60b76100.000ENSSMAG00000016381puf60b76100.000Scophthalmus_maximus
ENSONIG00000006247puf60b9896.604ENSSDUG00000009935puf60b9996.604Seriola_dumerili
ENSONIG00000006247puf60b9583.730ENSSDUG00000007048-9684.752Seriola_dumerili
ENSONIG00000006247puf60b9781.731ENSSLDG00000007366-9982.150Seriola_lalandi_dorsalis
ENSONIG00000006247puf60b9898.450ENSSLDG00000024011puf60b10096.015Seriola_lalandi_dorsalis
ENSONIG00000006247puf60b6378.466ENSSPUG00000013518PUF609278.466Sphenodon_punctatus
ENSONIG00000006247puf60b9895.497ENSSPAG00000012144puf60b10095.636Stegastes_partitus
ENSONIG00000006247puf60b9783.333ENSSPAG00000020285-10083.915Stegastes_partitus
ENSONIG00000006247puf60b9984.659ENSSSCG00000038800PUF609881.594Sus_scrofa
ENSONIG00000006247puf60b9882.890ENSTGUG00000012797-10082.890Taeniopygia_guttata
ENSONIG00000006247puf60b10095.636ENSTRUG00000005420puf60b10093.928Takifugu_rubripes
ENSONIG00000006247puf60b9778.988ENSTRUG00000008843-10078.599Takifugu_rubripes
ENSONIG00000006247puf60b9979.231ENSTNIG00000003069-10079.615Tetraodon_nigroviridis
ENSONIG00000006247puf60b9996.346ENSTNIG00000013675puf60b10096.346Tetraodon_nigroviridis
ENSONIG00000006247puf60b5485.223ENSTBEG00000002751-9785.223Tupaia_belangeri
ENSONIG00000006247puf60b7565.242ENSTBEG00000001899-10066.097Tupaia_belangeri
ENSONIG00000006247puf60b9784.261ENSTTRG00000017088PUF6010084.453Tursiops_truncatus
ENSONIG00000006247puf60b9984.659ENSUAMG00000024917PUF609884.630Ursus_americanus
ENSONIG00000006247puf60b9979.735ENSUMAG00000000272PUF609479.545Ursus_maritimus
ENSONIG00000006247puf60b9984.659ENSVVUG00000022527PUF6010085.413Vulpes_vulpes
ENSONIG00000006247puf60b9882.667ENSXETG00000012469puf609882.857Xenopus_tropicalis
ENSONIG00000006247puf60b9794.737ENSXCOG00000012355puf60b10094.737Xiphophorus_couchianus
ENSONIG00000006247puf60b9898.073ENSXMAG00000001862puf60b10098.051Xiphophorus_maculatus
ENSONIG00000006247puf60b9978.626ENSXMAG00000010507-9978.626Xiphophorus_maculatus

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