EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000006340 (Gene tree)
Gene ID: 100706038
Gene Symbol: rab13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 5741 bases
Position: chrGL831229.1:2010522-2016262
Accession: ZDB-GENE-030826-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000007992	MMR_HSR1	PF01926.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000007997	-	609	-	ENSONIP00000007992	202 (aa)	-	I3JGK1

Gene Model

Click here to download ENSONIG00000006340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000006340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000006340	rab13	95	40.000	ENSONIG00000006715	-	84	40.000
ENSONIG00000006340	rab13	95	37.879	ENSONIG00000020945	-	97	37.879
ENSONIG00000006340	rab13	76	36.364	ENSONIG00000018503	rheb	83	36.364
ENSONIG00000006340	rab13	93	45.745	ENSONIG00000015072	RAB11A	87	45.745
ENSONIG00000006340	rab13	96	38.424	ENSONIG00000000558	-	94	38.424
ENSONIG00000006340	rab13	90	46.154	ENSONIG00000005708	rab30	90	46.154
ENSONIG00000006340	rab13	81	47.561	ENSONIG00000018673	rab18b	80	47.561
ENSONIG00000006340	rab13	84	50.000	ENSONIG00000009443	si:dkey-16l2.16	81	50.000
ENSONIG00000006340	rab13	80	43.827	ENSONIG00000011542	-	100	43.827
ENSONIG00000006340	rab13	85	57.558	ENSONIG00000006819	-	84	57.558
ENSONIG00000006340	rab13	84	45.930	ENSONIG00000006997	-	81	45.930
ENSONIG00000006340	rab13	96	34.184	ENSONIG00000014560	hrasb	98	34.184
ENSONIG00000006340	rab13	78	38.750	ENSONIG00000005519	rab34b	63	38.750
ENSONIG00000006340	rab13	98	36.816	ENSONIG00000020336	RAB7A	97	36.816
ENSONIG00000006340	rab13	81	39.881	ENSONIG00000020675	rab9a	82	39.881
ENSONIG00000006340	rab13	80	42.169	ENSONIG00000006876	rab22a	83	42.169
ENSONIG00000006340	rab13	78	44.025	ENSONIG00000002774	RAB41	75	44.025
ENSONIG00000006340	rab13	57	30.769	ENSONIG00000015815	arl3	60	30.769
ENSONIG00000006340	rab13	99	48.020	ENSONIG00000015990	rab35b	100	48.020
ENSONIG00000006340	rab13	85	40.761	ENSONIG00000011559	rab33ba	75	40.761
ENSONIG00000006340	rab13	95	39.487	ENSONIG00000016279	-	88	39.487
ENSONIG00000006340	rab13	88	51.124	ENSONIG00000018469	rab12	80	48.223
ENSONIG00000006340	rab13	84	50.588	ENSONIG00000016851	-	78	50.588
ENSONIG00000006340	rab13	94	32.642	ENSONIG00000014885	rabl2	83	32.642
ENSONIG00000006340	rab13	97	42.029	ENSONIG00000002281	rab11al	96	42.029
ENSONIG00000006340	rab13	95	42.857	ENSONIG00000002284	rab25b	95	42.857
ENSONIG00000006340	rab13	81	36.970	ENSONIG00000014717	kras	88	36.905
ENSONIG00000006340	rab13	78	44.937	ENSONIG00000009886	rab6bb	76	44.937
ENSONIG00000006340	rab13	96	32.500	ENSONIG00000004448	si:ch73-116o1.2	82	35.632
ENSONIG00000006340	rab13	82	38.182	ENSONIG00000009749	rab23	80	35.979
ENSONIG00000006340	rab13	91	40.217	ENSONIG00000002410	rab25a	88	40.217
ENSONIG00000006340	rab13	93	38.974	ENSONIG00000014892	RAB29	93	38.579
ENSONIG00000006340	rab13	83	47.024	ENSONIG00000016622	rab2a	79	47.024
ENSONIG00000006340	rab13	88	44.382	ENSONIG00000003725	rab18a	87	44.382
ENSONIG00000006340	rab13	98	36.318	ENSONIG00000019036	-	97	36.318
ENSONIG00000006340	rab13	83	41.317	ENSONIG00000001113	rab5c	80	39.773
ENSONIG00000006340	rab13	85	30.726	ENSONIG00000009008	dnajc27	67	30.726
ENSONIG00000006340	rab13	80	31.792	ENSONIG00000011866	rasl11a	67	31.792
ENSONIG00000006340	rab13	94	36.715	ENSONIG00000013175	rab34a	77	36.715
ENSONIG00000006340	rab13	87	55.429	ENSONIG00000005781	rab15	82	55.429
ENSONIG00000006340	rab13	85	45.665	ENSONIG00000008545	RAB39B	81	45.665
ENSONIG00000006340	rab13	86	40.984	ENSONIG00000003367	-	88	40.984
ENSONIG00000006340	rab13	83	43.713	ENSONIG00000014099	rab14	78	43.713
ENSONIG00000006340	rab13	96	34.518	ENSONIG00000007797	rras	93	34.518
ENSONIG00000006340	rab13	87	46.591	ENSONIG00000010435	rab11bb	81	46.591
ENSONIG00000006340	rab13	86	33.708	ENSONIG00000009978	si:cabz01085950.1	87	33.708
ENSONIG00000006340	rab13	97	35.821	ENSONIG00000020581	rab9b	98	35.821
ENSONIG00000006340	rab13	85	56.395	ENSONIG00000002065	rab1ba	84	56.395
ENSONIG00000006340	rab13	86	38.418	ENSONIG00000020296	si:dkey-13a21.4	86	38.418
ENSONIG00000006340	rab13	89	56.667	ENSONIG00000012069	RAB15	85	56.667
ENSONIG00000006340	rab13	87	46.591	ENSONIG00000002535	rab11ba	81	46.591
ENSONIG00000006340	rab13	83	44.186	ENSONIG00000015828	rab33a	62	44.186
ENSONIG00000006340	rab13	94	40.000	ENSONIG00000004394	rab6a	91	40.000
ENSONIG00000006340	rab13	83	34.320	ENSONIG00000019066	rhebl1	91	34.320
ENSONIG00000006340	rab13	81	33.140	ENSONIG00000003031	rasl11b	73	33.333
ENSONIG00000006340	rab13	80	38.650	ENSONIG00000016776	RAB17	83	40.789
ENSONIG00000006340	rab13	87	46.591	ENSONIG00000002544	-	81	46.591
ENSONIG00000006340	rab13	86	43.678	ENSONIG00000002425	rab5aa	80	43.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000006340	rab13	99	75.743	ENSG00000143545	RAB13	99	75.743	Homo_sapiens
ENSONIG00000006340	rab13	94	94.709	ENSACIG00000008584	rab13	91	94.709	Amphilophus_citrinellus
ENSONIG00000006340	rab13	99	76.238	ENSANAG00000030247	-	99	76.238	Aotus_nancymaae
ENSONIG00000006340	rab13	100	88.119	ENSAMXG00000030712	rab13	100	88.119	Astyanax_mexicanus
ENSONIG00000006340	rab13	99	76.238	ENSBTAG00000017604	RAB13	99	76.238	Bos_taurus
ENSONIG00000006340	rab13	80	48.148	WBGene00019317	K02E10.1	74	48.148	Caenorhabditis_elegans
ENSONIG00000006340	rab13	89	81.183	ENSCJAG00000009933	-	99	75.743	Callithrix_jacchus
ENSONIG00000006340	rab13	99	76.238	ENSCHIG00000022271	-	99	76.238	Capra_hircus
ENSONIG00000006340	rab13	99	76.733	ENSCPOG00000011491	-	99	76.733	Cavia_porcellus
ENSONIG00000006340	rab13	99	75.743	ENSCCAG00000028502	-	99	75.743	Cebus_capucinus
ENSONIG00000006340	rab13	99	75.743	ENSCATG00000041779	-	99	75.743	Cercocebus_atys
ENSONIG00000006340	rab13	99	76.238	ENSCLAG00000006603	-	99	76.238	Chinchilla_lanigera
ENSONIG00000006340	rab13	99	75.743	ENSCANG00000036573	-	99	75.743	Colobus_angolensis_palliatus
ENSONIG00000006340	rab13	99	76.238	ENSCGRG00001021505	Rab13	99	76.238	Cricetulus_griseus_chok1gshd
ENSONIG00000006340	rab13	99	76.238	ENSCGRG00000012126	Rab13	99	76.238	Cricetulus_griseus_crigri
ENSONIG00000006340	rab13	100	88.614	ENSCSEG00000002358	rab13	100	88.614	Cynoglossus_semilaevis
ENSONIG00000006340	rab13	100	88.614	ENSDARG00000034771	rab13	100	88.614	Danio_rerio
ENSONIG00000006340	rab13	99	77.723	ENSDORG00000001591	Rab13	99	77.723	Dipodomys_ordii
ENSONIG00000006340	rab13	99	76.238	ENSEASG00005000683	-	99	76.238	Equus_asinus_asinus
ENSONIG00000006340	rab13	99	76.238	ENSECAG00000016551	RAB13	99	76.238	Equus_caballus
ENSONIG00000006340	rab13	100	73.399	ENSEEUG00000001233	-	100	73.399	Erinaceus_europaeus
ENSONIG00000006340	rab13	100	87.129	ENSELUG00000012801	rab13	100	87.129	Esox_lucius
ENSONIG00000006340	rab13	99	75.248	ENSFCAG00000045269	-	99	75.248	Felis_catus
ENSONIG00000006340	rab13	65	89.313	ENSFDAG00000014469	-	99	89.313	Fukomys_damarensis
ENSONIG00000006340	rab13	100	87.129	ENSFHEG00000021221	rab13	99	93.407	Fundulus_heteroclitus
ENSONIG00000006340	rab13	100	89.604	ENSGACG00000011925	rab13	99	89.604	Gasterosteus_aculeatus
ENSONIG00000006340	rab13	87	84.091	ENSGAGG00000000742	-	100	76.238	Gopherus_agassizii
ENSONIG00000006340	rab13	99	75.743	ENSGGOG00000023693	RAB13	99	75.743	Gorilla_gorilla
ENSONIG00000006340	rab13	99	74.627	ENSHGLG00000008749	RAB13	99	74.627	Heterocephalus_glaber_female
ENSONIG00000006340	rab13	99	74.627	ENSHGLG00100013608	RAB13	99	74.627	Heterocephalus_glaber_male
ENSONIG00000006340	rab13	89	96.667	ENSHCOG00000007440	rab13	99	96.667	Hippocampus_comes
ENSONIG00000006340	rab13	100	88.614	ENSIPUG00000003199	rab13	100	88.614	Ictalurus_punctatus
ENSONIG00000006340	rab13	99	77.228	ENSSTOG00000011222	-	99	77.228	Ictidomys_tridecemlineatus
ENSONIG00000006340	rab13	99	75.248	ENSJJAG00000010575	Rab13	99	75.248	Jaculus_jaculus
ENSONIG00000006340	rab13	100	86.634	ENSKMAG00000001908	rab13	100	86.634	Kryptolebias_marmoratus
ENSONIG00000006340	rab13	100	89.109	ENSLBEG00000026779	rab13	100	89.109	Labrus_bergylta
ENSONIG00000006340	rab13	88	78.090	ENSLACG00000008103	-	100	78.090	Latimeria_chalumnae
ENSONIG00000006340	rab13	99	75.743	ENSMFAG00000041018	RAB13	99	75.743	Macaca_fascicularis
ENSONIG00000006340	rab13	99	75.743	ENSMNEG00000028951	-	99	75.743	Macaca_nemestrina
ENSONIG00000006340	rab13	99	75.743	ENSMLEG00000042247	-	99	75.743	Mandrillus_leucophaeus
ENSONIG00000006340	rab13	100	90.099	ENSMAMG00000014602	rab13	100	90.099	Mastacembelus_armatus
ENSONIG00000006340	rab13	99	76.733	ENSMAUG00000015713	Rab13	99	76.733	Mesocricetus_auratus
ENSONIG00000006340	rab13	99	77.723	ENSMICG00000010340	-	99	77.723	Microcebus_murinus
ENSONIG00000006340	rab13	99	76.733	ENSMOCG00000021448	Rab13	99	76.733	Microtus_ochrogaster
ENSONIG00000006340	rab13	99	78.000	ENSMODG00000017295	-	84	78.000	Monodelphis_domestica
ENSONIG00000006340	rab13	99	74.752	MGP_CAROLIEiJ_G0025227	Rab13	99	74.752	Mus_caroli
ENSONIG00000006340	rab13	99	75.124	ENSMUSG00000027935	Rab13	99	75.124	Mus_musculus
ENSONIG00000006340	rab13	100	74.752	MGP_PahariEiJ_G0026671	Rab13	100	74.752	Mus_pahari
ENSONIG00000006340	rab13	99	76.119	ENSNGAG00000010309	Rab13	99	76.119	Nannospalax_galili
ENSONIG00000006340	rab13	100	91.584	ENSNBRG00000004124	rab13	100	91.584	Neolamprologus_brichardi
ENSONIG00000006340	rab13	99	75.743	ENSNLEG00000028944	-	99	75.743	Nomascus_leucogenys
ENSONIG00000006340	rab13	99	77.723	ENSMEUG00000009667	-	99	77.723	Notamacropus_eugenii
ENSONIG00000006340	rab13	63	88.976	ENSODEG00000012634	-	100	88.976	Octodon_degus
ENSONIG00000006340	rab13	99	75.248	ENSODEG00000010443	-	99	75.248	Octodon_degus
ENSONIG00000006340	rab13	87	83.523	ENSOCUG00000006286	-	99	83.523	Oryctolagus_cuniculus
ENSONIG00000006340	rab13	100	91.089	ENSOMEG00000008210	rab13	100	91.089	Oryzias_melastigma
ENSONIG00000006340	rab13	99	74.627	ENSOGAG00000016969	-	99	74.627	Otolemur_garnettii
ENSONIG00000006340	rab13	99	75.743	ENSPPAG00000028435	-	99	75.743	Pan_paniscus
ENSONIG00000006340	rab13	99	75.248	ENSPPRG00000008865	-	99	75.248	Panthera_pardus
ENSONIG00000006340	rab13	99	75.743	ENSPTRG00000001370	RAB13	99	75.743	Pan_troglodytes
ENSONIG00000006340	rab13	99	75.743	ENSPANG00000004479	-	99	75.743	Papio_anubis
ENSONIG00000006340	rab13	100	88.614	ENSPMGG00000007680	rab13	100	88.614	Periophthalmus_magnuspinnatus
ENSONIG00000006340	rab13	57	86.957	ENSPEMG00000017353	-	86	86.957	Peromyscus_maniculatus_bairdii
ENSONIG00000006340	rab13	99	77.723	ENSPCIG00000029350	-	99	77.723	Phascolarctos_cinereus
ENSONIG00000006340	rab13	88	96.629	ENSPLAG00000005832	RAB13	95	96.629	Poecilia_latipinna
ENSONIG00000006340	rab13	89	96.089	ENSPREG00000017567	rab13	100	89.109	Poecilia_reticulata
ENSONIG00000006340	rab13	99	75.743	ENSPPYG00000000790	-	99	75.743	Pongo_abelii
ENSONIG00000006340	rab13	99	76.617	ENSPCOG00000012189	-	99	76.617	Propithecus_coquereli
ENSONIG00000006340	rab13	99	75.124	ENSPVAG00000011095	-	99	75.124	Pteropus_vampyrus
ENSONIG00000006340	rab13	89	97.765	ENSPNAG00000004189	rab13	95	97.765	Pygocentrus_nattereri
ENSONIG00000006340	rab13	99	75.743	ENSRNOG00000016733	Rab13	99	75.743	Rattus_norvegicus
ENSONIG00000006340	rab13	99	75.743	ENSRBIG00000008552	-	99	75.743	Rhinopithecus_bieti
ENSONIG00000006340	rab13	99	75.743	ENSRROG00000036885	-	99	75.743	Rhinopithecus_roxellana
ENSONIG00000006340	rab13	99	76.119	ENSSBOG00000020342	-	99	76.119	Saimiri_boliviensis_boliviensis
ENSONIG00000006340	rab13	99	78.713	ENSSHAG00000011866	-	99	78.713	Sarcophilus_harrisii
ENSONIG00000006340	rab13	99	75.743	ENSSSCG00000006564	-	99	75.743	Sus_scrofa
ENSONIG00000006340	rab13	100	90.594	ENSTRUG00000024177	rab13	100	90.594	Takifugu_rubripes
ENSONIG00000006340	rab13	99	76.733	ENSTBEG00000012734	-	99	76.733	Tupaia_belangeri
ENSONIG00000006340	rab13	99	75.743	ENSTTRG00000011183	-	99	75.743	Tursiops_truncatus
ENSONIG00000006340	rab13	67	80.741	ENSXETG00000020729	rab13	100	71.429	Xenopus_tropicalis
ENSONIG00000006340	rab13	88	95.506	ENSXCOG00000019533	rab13	95	95.506	Xiphophorus_couchianus