EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000006573 (Gene tree)
Gene ID: 100703921
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 25062 bases
Position: chrGL831308.1:371715-396776
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000008293	RRM_5	PF13893.6	3.9e-08	1	2
ENSONIP00000008293	RRM_5	PF13893.6	3.9e-08	2	2
ENSONIP00000008294	RRM_5	PF13893.6	6e-08	1	2
ENSONIP00000008294	RRM_5	PF13893.6	6e-08	2	2
ENSONIP00000008295	RRM_5	PF13893.6	2.6e-06	1	1
ENSONIP00000008294	RRM_1	PF00076.22	1.9e-41	1	3
ENSONIP00000008294	RRM_1	PF00076.22	1.9e-41	2	3
ENSONIP00000008294	RRM_1	PF00076.22	1.9e-41	3	3
ENSONIP00000008293	RRM_1	PF00076.22	1.9e-41	1	3
ENSONIP00000008293	RRM_1	PF00076.22	1.9e-41	2	3
ENSONIP00000008293	RRM_1	PF00076.22	1.9e-41	3	3
ENSONIP00000008295	RRM_1	PF00076.22	1.7e-38	1	3
ENSONIP00000008295	RRM_1	PF00076.22	1.7e-38	2	3
ENSONIP00000008295	RRM_1	PF00076.22	1.7e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000008299	-	12322	-	ENSONIP00000008294	3421 (aa)	-	I3JHF0
ENSONIT00000008298	-	12376	-	ENSONIP00000008293	3439 (aa)	-	I3JHE9
ENSONIT00000008300	-	1644	-	ENSONIP00000008295	548 (aa)	-	I3JHF1

Gene Model

Click here to download ENSONIG00000006573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000006573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000006573	-	99	81.273	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSONIG00000006573	-	99	88.591	ENSAPOG00000009853	-	90	93.870	Acanthochromis_polyacanthus
ENSONIG00000006573	-	98	78.919	ENSAPOG00000011411	si:ch1073-335m2.2	100	78.919	Acanthochromis_polyacanthus
ENSONIG00000006573	-	99	80.909	ENSAMEG00000011817	SPEN	93	67.742	Ailuropoda_melanoleuca
ENSONIG00000006573	-	85	74.144	ENSAOCG00000008077	si:ch1073-335m2.2	97	72.486	Amphiprion_ocellaris
ENSONIG00000006573	-	99	88.591	ENSAOCG00000014505	-	100	82.523	Amphiprion_ocellaris
ENSONIG00000006573	-	99	73.105	ENSAPEG00000013515	si:ch1073-335m2.2	98	76.562	Amphiprion_percula
ENSONIG00000006573	-	99	88.591	ENSAPEG00000010288	-	100	82.416	Amphiprion_percula
ENSONIG00000006573	-	99	88.087	ENSATEG00000005627	-	100	79.092	Anabas_testudineus
ENSONIG00000006573	-	98	78.919	ENSATEG00000007674	si:ch1073-335m2.2	100	78.919	Anabas_testudineus
ENSONIG00000006573	-	95	80.000	ENSAPLG00000012618	SPEN	100	48.014	Anas_platyrhynchos
ENSONIG00000006573	-	93	77.068	ENSACAG00000013761	SPEN	100	45.769	Anolis_carolinensis
ENSONIG00000006573	-	95	80.190	ENSANAG00000034428	SPEN	96	46.256	Aotus_nancymaae
ENSONIG00000006573	-	100	95.062	ENSACLG00000016922	-	100	95.062	Astatotilapia_calliptera
ENSONIG00000006573	-	97	84.024	ENSACLG00000021433	si:ch1073-335m2.2	99	84.024	Astatotilapia_calliptera
ENSONIG00000006573	-	98	88.705	ENSAMXG00000012485	spen	100	55.023	Astyanax_mexicanus
ENSONIG00000006573	-	99	81.273	ENSBTAG00000018729	SPEN	97	46.868	Bos_taurus
ENSONIG00000006573	-	99	81.273	ENSCJAG00000008527	SPEN	96	46.919	Callithrix_jacchus
ENSONIG00000006573	-	99	81.307	ENSCAFG00000016132	-	92	53.924	Canis_familiaris
ENSONIG00000006573	-	99	81.455	ENSCHIG00000025070	SPEN	96	47.399	Capra_hircus
ENSONIG00000006573	-	91	43.768	ENSTSYG00000036016	SPEN	96	43.927	Carlito_syrichta
ENSONIG00000006573	-	95	79.771	ENSCAPG00000013803	SPEN	97	47.017	Cavia_aperea
ENSONIG00000006573	-	94	79.732	ENSCPOG00000014036	SPEN	96	47.277	Cavia_porcellus
ENSONIG00000006573	-	95	67.339	ENSCCAG00000020258	SPEN	85	44.046	Cebus_capucinus
ENSONIG00000006573	-	94	79.924	ENSCLAG00000002018	SPEN	93	67.206	Chinchilla_lanigera
ENSONIG00000006573	-	99	81.636	ENSCPBG00000010477	SPEN	100	47.787	Chrysemys_picta_bellii
ENSONIG00000006573	-	99	77.778	ENSCANG00000034547	SPEN	90	48.774	Colobus_angolensis_palliatus
ENSONIG00000006573	-	99	81.273	ENSCGRG00001007725	Spen	97	46.662	Cricetulus_griseus_chok1gshd
ENSONIG00000006573	-	94	76.789	ENSCGRG00000010581	Spen	97	45.455	Cricetulus_griseus_crigri
ENSONIG00000006573	-	99	86.935	ENSCSEG00000003915	-	100	73.509	Cynoglossus_semilaevis
ENSONIG00000006573	-	99	85.906	ENSCVAG00000016346	-	100	73.791	Cyprinodon_variegatus
ENSONIG00000006573	-	98	78.919	ENSCVAG00000009075	si:ch1073-335m2.2	100	78.919	Cyprinodon_variegatus
ENSONIG00000006573	-	99	69.912	ENSDARG00000074332	si:ch1073-335m2.2	100	69.907	Danio_rerio
ENSONIG00000006573	-	99	79.097	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSONIG00000006573	-	99	80.651	ENSDNOG00000041948	SPEN	96	46.719	Dasypus_novemcinctus
ENSONIG00000006573	-	95	79.924	ENSDORG00000023909	Spen	97	44.778	Dipodomys_ordii
ENSONIG00000006573	-	95	87.500	ENSEASG00005015911	SPEN	96	80.263	Equus_asinus_asinus
ENSONIG00000006573	-	95	87.500	ENSECAG00000008833	SPEN	96	80.263	Equus_caballus
ENSONIG00000006573	-	91	80.159	ENSEEUG00000010255	SPEN	63	88.372	Erinaceus_europaeus
ENSONIG00000006573	-	97	82.778	ENSELUG00000007726	si:ch1073-335m2.2	99	82.778	Esox_lucius
ENSONIG00000006573	-	88	45.502	ENSFALG00000003551	SPEN	100	45.248	Ficedula_albicollis
ENSONIG00000006573	-	93	79.537	ENSFDAG00000010212	SPEN	88	48.333	Fukomys_damarensis
ENSONIG00000006573	-	99	69.439	ENSFHEG00000004544	si:ch1073-335m2.2	100	73.913	Fundulus_heteroclitus
ENSONIG00000006573	-	99	79.855	ENSGMOG00000008397	-	98	88.525	Gadus_morhua
ENSONIG00000006573	-	99	74.775	ENSGMOG00000008156	si:ch1073-335m2.2	98	73.301	Gadus_morhua
ENSONIG00000006573	-	99	81.636	ENSGALG00000036932	SPEN	99	48.850	Gallus_gallus
ENSONIG00000006573	-	99	87.205	ENSGAFG00000015819	-	90	90.805	Gambusia_affinis
ENSONIG00000006573	-	98	77.838	ENSGAFG00000021570	si:ch1073-335m2.2	100	77.838	Gambusia_affinis
ENSONIG00000006573	-	99	92.532	ENSGACG00000005341	-	100	75.948	Gasterosteus_aculeatus
ENSONIG00000006573	-	99	73.599	ENSGACG00000001176	si:ch1073-335m2.2	97	79.651	Gasterosteus_aculeatus
ENSONIG00000006573	-	99	81.636	ENSGAGG00000020785	SPEN	100	48.817	Gopherus_agassizii
ENSONIG00000006573	-	94	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	99	84.024	Haplochromis_burtoni
ENSONIG00000006573	-	100	95.061	ENSHBUG00000020626	-	100	95.061	Haplochromis_burtoni
ENSONIG00000006573	-	99	80.762	ENSHGLG00000019259	SPEN	81	67.611	Heterocephalus_glaber_female
ENSONIG00000006573	-	93	79.151	ENSHGLG00100019294	SPEN	77	67.611	Heterocephalus_glaber_male
ENSONIG00000006573	-	94	76.812	ENSHCOG00000006004	si:ch1073-335m2.2	99	76.812	Hippocampus_comes
ENSONIG00000006573	-	99	76.167	ENSIPUG00000021668	spen	100	52.664	Ictalurus_punctatus
ENSONIG00000006573	-	94	67.117	ENSIPUG00000018212	si:ch1073-335m2.2	99	67.117	Ictalurus_punctatus
ENSONIG00000006573	-	93	80.271	ENSSTOG00000021428	SPEN	94	67.339	Ictidomys_tridecemlineatus
ENSONIG00000006573	-	99	81.091	ENSJJAG00000010882	Spen	100	44.976	Jaculus_jaculus
ENSONIG00000006573	-	94	77.838	ENSKMAG00000021725	si:ch1073-335m2.2	100	77.838	Kryptolebias_marmoratus
ENSONIG00000006573	-	99	87.081	ENSKMAG00000003882	-	100	76.388	Kryptolebias_marmoratus
ENSONIG00000006573	-	85	74.344	ENSLBEG00000019129	-	100	74.211	Labrus_bergylta
ENSONIG00000006573	-	99	73.105	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	Labrus_bergylta
ENSONIG00000006573	-	99	83.122	ENSLACG00000003258	SPEN	76	85.185	Latimeria_chalumnae
ENSONIG00000006573	-	99	76.588	ENSLOCG00000007896	si:ch1073-335m2.2	100	54.700	Lepisosteus_oculatus
ENSONIG00000006573	-	99	77.574	ENSLAFG00000004524	SPEN	94	66.532	Loxodonta_africana
ENSONIG00000006573	-	99	81.273	ENSMNEG00000042402	SPEN	86	50.365	Macaca_nemestrina
ENSONIG00000006573	-	97	78.919	ENSMAMG00000023870	si:ch1073-335m2.2	99	78.919	Mastacembelus_armatus
ENSONIG00000006573	-	97	84.024	ENSMZEG00005011762	si:ch1073-335m2.2	99	84.024	Maylandia_zebra
ENSONIG00000006573	-	90	96.139	ENSMZEG00005021491	-	99	96.139	Maylandia_zebra
ENSONIG00000006573	-	99	82.514	ENSMGAG00000005180	-	99	81.967	Meleagris_gallopavo
ENSONIG00000006573	-	99	81.273	ENSMAUG00000008318	Spen	96	52.655	Mesocricetus_auratus
ENSONIG00000006573	-	99	81.273	ENSMICG00000030994	SPEN	94	67.871	Microcebus_murinus
ENSONIG00000006573	-	99	80.727	ENSMOCG00000016083	Spen	97	46.053	Microtus_ochrogaster
ENSONIG00000006573	-	98	68.610	ENSMMOG00000021742	si:ch1073-335m2.2	99	68.610	Mola_mola
ENSONIG00000006573	-	99	80.399	ENSMODG00000003411	SPEN	100	46.564	Monodelphis_domestica
ENSONIG00000006573	-	99	87.248	ENSMALG00000008625	-	100	79.541	Monopterus_albus
ENSONIG00000006573	-	99	80.727	MGP_PahariEiJ_G0029076	Spen	97	46.545	Mus_pahari
ENSONIG00000006573	-	99	81.091	MGP_SPRETEiJ_G0027724	Spen	97	46.207	Mus_spretus
ENSONIG00000006573	-	95	77.778	ENSMPUG00000016317	SPEN	93	68.016	Mustela_putorius_furo
ENSONIG00000006573	-	94	87.097	ENSMLUG00000010144	SPEN	93	87.097	Myotis_lucifugus
ENSONIG00000006573	-	99	80.909	ENSNGAG00000000641	Spen	96	66.532	Nannospalax_galili
ENSONIG00000006573	-	94	84.024	ENSNBRG00000005733	si:ch1073-335m2.2	99	84.024	Neolamprologus_brichardi
ENSONIG00000006573	-	86	96.336	ENSNBRG00000022090	-	100	96.336	Neolamprologus_brichardi
ENSONIG00000006573	-	90	83.333	ENSMEUG00000002422	SPEN	90	83.333	Notamacropus_eugenii
ENSONIG00000006573	-	94	80.268	ENSOPRG00000015800	SPEN	82	69.694	Ochotona_princeps
ENSONIG00000006573	-	99	74.047	ENSODEG00000016644	SPEN	100	44.296	Octodon_degus
ENSONIG00000006573	-	94	80.268	ENSOANG00000004165	-	100	79.119	Ornithorhynchus_anatinus
ENSONIG00000006573	-	98	74.725	ENSOCUG00000010840	SPEN	97	44.345	Oryctolagus_cuniculus
ENSONIG00000006573	-	99	71.920	ENSORLG00000018414	si:ch1073-335m2.2	100	74.874	Oryzias_latipes
ENSONIG00000006573	-	88	65.558	ENSORLG00000028894	-	100	65.430	Oryzias_latipes
ENSONIG00000006573	-	88	66.024	ENSORLG00020007735	-	100	65.799	Oryzias_latipes_hni
ENSONIG00000006573	-	97	74.874	ENSORLG00020009351	si:ch1073-335m2.2	100	74.874	Oryzias_latipes_hni
ENSONIG00000006573	-	99	84.264	ENSORLG00015022085	-	100	67.426	Oryzias_latipes_hsok
ENSONIG00000006573	-	93	82.716	ENSORLG00015005537	si:ch1073-335m2.2	100	74.866	Oryzias_latipes_hsok
ENSONIG00000006573	-	99	83.080	ENSOMEG00000007639	-	100	67.454	Oryzias_melastigma
ENSONIG00000006573	-	96	83.436	ENSOMEG00000004509	si:ch1073-335m2.2	99	83.436	Oryzias_melastigma
ENSONIG00000006573	-	99	81.455	ENSOGAG00000025110	SPEN	93	68.145	Otolemur_garnettii
ENSONIG00000006573	-	98	78.388	ENSOARG00000008477	SPEN	96	46.480	Ovis_aries
ENSONIG00000006573	-	99	80.101	ENSPKIG00000002617	SPEN	90	82.443	Paramormyrops_kingsleyae
ENSONIG00000006573	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSONIG00000006573	-	94	76.008	ENSPSIG00000008026	SPEN	100	47.313	Pelodiscus_sinensis
ENSONIG00000006573	-	94	80.077	ENSPEMG00000022997	Spen	97	45.882	Peromyscus_maniculatus_bairdii
ENSONIG00000006573	-	99	95.238	ENSPFOG00000024806	-	99	95.238	Poecilia_formosa
ENSONIG00000006573	-	99	71.790	ENSPFOG00000017986	si:ch1073-335m2.2	100	78.378	Poecilia_formosa
ENSONIG00000006573	-	98	78.378	ENSPLAG00000016625	si:ch1073-335m2.2	100	78.378	Poecilia_latipinna
ENSONIG00000006573	-	99	87.037	ENSPMEG00000006764	-	90	90.421	Poecilia_mexicana
ENSONIG00000006573	-	99	71.790	ENSPMEG00000002674	si:ch1073-335m2.2	100	78.378	Poecilia_mexicana
ENSONIG00000006573	-	99	69.856	ENSPREG00000005357	si:ch1073-335m2.2	100	78.378	Poecilia_reticulata
ENSONIG00000006573	-	99	86.745	ENSPREG00000010399	-	90	90.421	Poecilia_reticulata
ENSONIG00000006573	-	76	78.385	ENSPCAG00000009543	SPEN	87	65.323	Procavia_capensis
ENSONIG00000006573	-	99	81.091	ENSPCOG00000021735	SPEN	96	46.212	Propithecus_coquereli
ENSONIG00000006573	-	99	81.273	ENSPVAG00000013794	SPEN	70	68.519	Pteropus_vampyrus
ENSONIG00000006573	-	97	84.024	ENSPNYG00000009042	si:ch1073-335m2.2	99	84.024	Pundamilia_nyererei
ENSONIG00000006573	-	100	95.117	ENSPNYG00000012379	-	100	95.117	Pundamilia_nyererei
ENSONIG00000006573	-	99	74.414	ENSPNAG00000011452	si:ch1073-335m2.2	100	69.811	Pygocentrus_nattereri
ENSONIG00000006573	-	98	88.430	ENSPNAG00000020795	spen	87	83.588	Pygocentrus_nattereri
ENSONIG00000006573	-	95	80.306	ENSRNOG00000033556	Spen	97	45.561	Rattus_norvegicus
ENSONIG00000006573	-	99	78.245	ENSRBIG00000039654	SPEN	85	50.282	Rhinopithecus_bieti
ENSONIG00000006573	-	95	80.190	ENSRROG00000035686	SPEN	85	50.304	Rhinopithecus_roxellana
ENSONIG00000006573	-	95	80.381	ENSSBOG00000028770	SPEN	85	50.454	Saimiri_boliviensis_boliviensis
ENSONIG00000006573	-	95	79.735	ENSSHAG00000004960	SPEN	99	79.167	Sarcophilus_harrisii
ENSONIG00000006573	-	99	81.293	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.392	Scleropages_formosus
ENSONIG00000006573	-	87	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	Scleropages_formosus
ENSONIG00000006573	-	99	73.561	ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	Scophthalmus_maximus
ENSONIG00000006573	-	99	87.416	ENSSMAG00000008996	-	100	79.327	Scophthalmus_maximus
ENSONIG00000006573	-	99	88.758	ENSSDUG00000003476	-	90	92.830	Seriola_dumerili
ENSONIG00000006573	-	99	74.007	ENSSDUG00000008416	si:ch1073-335m2.2	100	70.136	Seriola_dumerili
ENSONIG00000006573	-	99	88.758	ENSSLDG00000012950	-	90	92.830	Seriola_lalandi_dorsalis
ENSONIG00000006573	-	99	74.007	ENSSLDG00000023347	si:ch1073-335m2.2	100	69.683	Seriola_lalandi_dorsalis
ENSONIG00000006573	-	88	44.139	ENSSPUG00000001866	-	100	44.259	Sphenodon_punctatus
ENSONIG00000006573	-	95	79.459	ENSSPAG00000012454	si:ch1073-335m2.2	100	79.459	Stegastes_partitus
ENSONIG00000006573	-	99	88.758	ENSSPAG00000006014	-	90	93.870	Stegastes_partitus
ENSONIG00000006573	-	99	88.235	ENSTRUG00000024350	-	100	73.021	Takifugu_rubripes
ENSONIG00000006573	-	86	74.000	ENSTRUG00000021008	si:ch1073-335m2.2	100	74.000	Takifugu_rubripes
ENSONIG00000006573	-	99	93.590	ENSTNIG00000010907	-	100	92.133	Tetraodon_nigroviridis
ENSONIG00000006573	-	68	92.035	ENSTBEG00000003628	SPEN	69	80.423	Tupaia_belangeri
ENSONIG00000006573	-	94	79.693	ENSTTRG00000015704	SPEN	68	80.423	Tursiops_truncatus
ENSONIG00000006573	-	99	81.273	ENSUAMG00000009600	SPEN	93	68.145	Ursus_americanus
ENSONIG00000006573	-	96	79.584	ENSUMAG00000021641	SPEN	93	68.145	Ursus_maritimus
ENSONIG00000006573	-	89	100.000	ENSVVUG00000028951	SPEN	92	100.000	Vulpes_vulpes
ENSONIG00000006573	-	99	63.702	ENSXETG00000023114	SPEN	68	44.642	Xenopus_tropicalis
ENSONIG00000006573	-	98	75.500	ENSXCOG00000004516	si:ch1073-335m2.2	100	75.500	Xiphophorus_couchianus
ENSONIG00000006573	-	99	86.409	ENSXMAG00000021384	-	90	88.123	Xiphophorus_maculatus
ENSONIG00000006573	-	98	78.378	ENSXMAG00000029887	si:ch1073-335m2.2	100	78.378	Xiphophorus_maculatus