EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000007084 (Gene tree)
Gene ID: 100699059
Gene Symbol: wdhd1
Alias: -
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 20463 bases
Position: chrGL831285.1:126437-146899
Accession: ZDB-GENE-030131-1665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000008940	eIF2A	PF08662.11	9.4e-06	1	1
ENSONIP00000008939	eIF2A	PF08662.11	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000008945	-	3744	-	ENSONIP00000008940	1115 (aa)	-	I3JJ96
ENSONIT00000008944	-	3777	-	ENSONIP00000008939	1126 (aa)	-	I3JJ95

Gene Model

Click here to download ENSONIG00000007084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007084	wdhd1	99	60.071	ENSG00000198554	WDHD1	100	79.167	Homo_sapiens
ENSONIG00000007084	wdhd1	99	84.322	ENSAPOG00000001560	wdhd1	98	87.411	Acanthochromis_polyacanthus
ENSONIG00000007084	wdhd1	99	59.334	ENSAMEG00000014356	WDHD1	100	58.835	Ailuropoda_melanoleuca
ENSONIG00000007084	wdhd1	95	91.676	ENSACIG00000021530	wdhd1	100	91.908	Amphilophus_citrinellus
ENSONIG00000007084	wdhd1	100	85.035	ENSAOCG00000018123	wdhd1	100	85.475	Amphiprion_ocellaris
ENSONIG00000007084	wdhd1	100	81.478	ENSAPEG00000000157	wdhd1	100	82.369	Amphiprion_percula
ENSONIG00000007084	wdhd1	100	84.224	ENSATEG00000021986	wdhd1	100	84.487	Anabas_testudineus
ENSONIG00000007084	wdhd1	98	58.902	ENSACAG00000016303	WDHD1	99	58.427	Anolis_carolinensis
ENSONIG00000007084	wdhd1	100	94.635	ENSACLG00000009036	wdhd1	100	94.723	Astatotilapia_calliptera
ENSONIG00000007084	wdhd1	74	73.373	ENSAMXG00000043712	wdhd1	96	72.109	Astyanax_mexicanus
ENSONIG00000007084	wdhd1	99	59.547	ENSBTAG00000019120	WDHD1	99	59.285	Bos_taurus
ENSONIG00000007084	wdhd1	99	59.402	ENSCJAG00000018208	WDHD1	99	59.682	Callithrix_jacchus
ENSONIG00000007084	wdhd1	89	57.297	ENSCAFG00000014989	WDHD1	99	56.807	Canis_familiaris
ENSONIG00000007084	wdhd1	99	59.312	ENSCHIG00000017956	WDHD1	99	58.916	Capra_hircus
ENSONIG00000007084	wdhd1	99	58.193	ENSTSYG00000000266	WDHD1	99	57.469	Carlito_syrichta
ENSONIG00000007084	wdhd1	61	67.492	ENSCCAG00000018389	WDHD1	92	73.704	Cebus_capucinus
ENSONIG00000007084	wdhd1	99	59.167	ENSCATG00000035221	WDHD1	99	59.227	Cercocebus_atys
ENSONIG00000007084	wdhd1	57	62.579	ENSCLAG00000013863	-	99	61.478	Chinchilla_lanigera
ENSONIG00000007084	wdhd1	98	58.348	ENSCSAG00000014757	WDHD1	99	58.534	Chlorocebus_sabaeus
ENSONIG00000007084	wdhd1	100	60.870	ENSCPBG00000020071	WDHD1	100	60.317	Chrysemys_picta_bellii
ENSONIG00000007084	wdhd1	93	65.086	ENSCANG00000037721	WDHD1	99	65.086	Colobus_angolensis_palliatus
ENSONIG00000007084	wdhd1	99	70.863	ENSDARG00000015998	wdhd1	96	79.592	Danio_rerio
ENSONIG00000007084	wdhd1	99	54.585	ENSDNOG00000006661	WDHD1	92	61.661	Dasypus_novemcinctus
ENSONIG00000007084	wdhd1	99	58.654	ENSECAG00000015412	WDHD1	97	58.983	Equus_caballus
ENSONIG00000007084	wdhd1	100	80.846	ENSELUG00000015575	wdhd1	100	80.846	Esox_lucius
ENSONIG00000007084	wdhd1	99	59.825	ENSFCAG00000023408	-	99	59.597	Felis_catus
ENSONIG00000007084	wdhd1	100	60.157	ENSGALG00000012199	WDHD1	100	59.178	Gallus_gallus
ENSONIG00000007084	wdhd1	100	63.715	ENSGACG00000017321	wdhd1	100	64.918	Gasterosteus_aculeatus
ENSONIG00000007084	wdhd1	74	68.453	ENSGAGG00000010665	-	94	68.337	Gopherus_agassizii
ENSONIG00000007084	wdhd1	99	60.000	ENSGGOG00000007744	WDHD1	99	59.649	Gorilla_gorilla
ENSONIG00000007084	wdhd1	99	58.070	ENSHGLG00000015105	WDHD1	99	58.880	Heterocephalus_glaber_female
ENSONIG00000007084	wdhd1	99	57.493	ENSHGLG00100001967	WDHD1	99	58.524	Heterocephalus_glaber_male
ENSONIG00000007084	wdhd1	100	74.889	ENSHCOG00000007286	wdhd1	100	73.179	Hippocampus_comes
ENSONIG00000007084	wdhd1	99	59.095	ENSSTOG00000020300	WDHD1	99	58.699	Ictidomys_tridecemlineatus
ENSONIG00000007084	wdhd1	99	53.351	ENSJJAG00000001164	Wdhd1	99	52.982	Jaculus_jaculus
ENSONIG00000007084	wdhd1	100	82.632	ENSLBEG00000024847	wdhd1	100	83.333	Labrus_bergylta
ENSONIG00000007084	wdhd1	99	59.035	ENSLACG00000019053	WDHD1	99	59.509	Latimeria_chalumnae
ENSONIG00000007084	wdhd1	100	67.969	ENSLOCG00000012086	wdhd1	100	68.293	Lepisosteus_oculatus
ENSONIG00000007084	wdhd1	99	60.069	ENSLAFG00000005385	WDHD1	100	60.017	Loxodonta_africana
ENSONIG00000007084	wdhd1	99	59.027	ENSMFAG00000032915	WDHD1	99	59.087	Macaca_fascicularis
ENSONIG00000007084	wdhd1	99	59.256	ENSMMUG00000000302	WDHD1	99	59.315	Macaca_mulatta
ENSONIG00000007084	wdhd1	99	59.027	ENSMNEG00000032489	WDHD1	99	59.087	Macaca_nemestrina
ENSONIG00000007084	wdhd1	99	59.027	ENSMLEG00000035661	WDHD1	99	59.087	Mandrillus_leucophaeus
ENSONIG00000007084	wdhd1	100	83.084	ENSMAMG00000016742	wdhd1	100	82.792	Mastacembelus_armatus
ENSONIG00000007084	wdhd1	100	94.635	ENSMZEG00005015228	wdhd1	100	94.723	Maylandia_zebra
ENSONIG00000007084	wdhd1	100	59.549	ENSMGAG00000013676	WDHD1	100	58.660	Meleagris_gallopavo
ENSONIG00000007084	wdhd1	99	58.694	ENSMICG00000016239	WDHD1	99	58.844	Microcebus_murinus
ENSONIG00000007084	wdhd1	100	75.066	ENSMMOG00000007869	wdhd1	100	74.541	Mola_mola
ENSONIG00000007084	wdhd1	100	57.031	ENSMODG00000011703	WDHD1	100	56.522	Monodelphis_domestica
ENSONIG00000007084	wdhd1	57	61.538	MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.381	Mus_caroli
ENSONIG00000007084	wdhd1	57	61.321	MGP_PahariEiJ_G0030180	Wdhd1	98	61.006	Mus_pahari
ENSONIG00000007084	wdhd1	99	55.517	ENSMPUG00000005542	WDHD1	99	56.080	Mustela_putorius_furo
ENSONIG00000007084	wdhd1	99	59.634	ENSMLUG00000010353	WDHD1	99	59.756	Myotis_lucifugus
ENSONIG00000007084	wdhd1	100	91.166	ENSNBRG00000010071	wdhd1	100	91.166	Neolamprologus_brichardi
ENSONIG00000007084	wdhd1	99	58.970	ENSNLEG00000012760	WDHD1	99	59.151	Nomascus_leucogenys
ENSONIG00000007084	wdhd1	83	52.822	ENSMEUG00000006706	WDHD1	79	55.665	Notamacropus_eugenii
ENSONIG00000007084	wdhd1	99	59.159	ENSOCUG00000004987	WDHD1	99	58.730	Oryctolagus_cuniculus
ENSONIG00000007084	wdhd1	94	75.189	ENSORLG00000019721	wdhd1	98	83.412	Oryzias_latipes
ENSONIG00000007084	wdhd1	100	77.241	ENSORLG00020007040	wdhd1	100	76.795	Oryzias_latipes_hni
ENSONIG00000007084	wdhd1	100	77.485	ENSORLG00015008848	wdhd1	100	77.045	Oryzias_latipes_hsok
ENSONIG00000007084	wdhd1	99	57.280	ENSOGAG00000003465	WDHD1	99	57.343	Otolemur_garnettii
ENSONIG00000007084	wdhd1	99	59.807	ENSOARG00000021081	WDHD1	99	59.143	Ovis_aries
ENSONIG00000007084	wdhd1	99	59.663	ENSPPAG00000035486	WDHD1	99	59.315	Pan_paniscus
ENSONIG00000007084	wdhd1	99	60.088	ENSPPRG00000007679	WDHD1	99	60.070	Panthera_pardus
ENSONIG00000007084	wdhd1	99	60.228	ENSPTIG00000013608	WDHD1	99	60.035	Panthera_tigris_altaica
ENSONIG00000007084	wdhd1	99	60.265	ENSPTRG00000006366	WDHD1	99	59.912	Pan_troglodytes
ENSONIG00000007084	wdhd1	99	59.027	ENSPANG00000017506	WDHD1	99	59.227	Papio_anubis
ENSONIG00000007084	wdhd1	100	63.996	ENSPKIG00000004863	wdhd1	100	63.144	Paramormyrops_kingsleyae
ENSONIG00000007084	wdhd1	100	58.905	ENSPSIG00000011635	WDHD1	99	59.921	Pelodiscus_sinensis
ENSONIG00000007084	wdhd1	99	60.035	ENSPPYG00000005834	WDHD1	99	59.649	Pongo_abelii
ENSONIG00000007084	wdhd1	99	54.960	ENSPVAG00000016064	WDHD1	99	54.825	Pteropus_vampyrus
ENSONIG00000007084	wdhd1	100	92.000	ENSPNYG00000019115	wdhd1	100	92.205	Pundamilia_nyererei
ENSONIG00000007084	wdhd1	100	70.976	ENSPNAG00000013823	wdhd1	100	69.077	Pygocentrus_nattereri
ENSONIG00000007084	wdhd1	99	57.867	ENSRNOG00000011167	Wdhd1	99	57.876	Rattus_norvegicus
ENSONIG00000007084	wdhd1	99	59.079	ENSRROG00000006993	WDHD1	99	59.312	Rhinopithecus_roxellana
ENSONIG00000007084	wdhd1	99	56.526	ENSSBOG00000034847	WDHD1	99	56.579	Saimiri_boliviensis_boliviensis
ENSONIG00000007084	wdhd1	98	56.122	ENSSHAG00000013551	WDHD1	100	55.506	Sarcophilus_harrisii
ENSONIG00000007084	wdhd1	99	66.192	ENSSFOG00015009950	wdhd1	99	66.252	Scleropages_formosus
ENSONIG00000007084	wdhd1	100	80.840	ENSSMAG00000007346	wdhd1	100	81.102	Scophthalmus_maximus
ENSONIG00000007084	wdhd1	100	77.974	ENSSDUG00000016996	wdhd1	100	77.641	Seriola_dumerili
ENSONIG00000007084	wdhd1	93	86.223	ENSSLDG00000021689	wdhd1	100	90.966	Seriola_lalandi_dorsalis
ENSONIG00000007084	wdhd1	99	58.844	ENSSSCG00000005052	WDHD1	99	58.896	Sus_scrofa
ENSONIG00000007084	wdhd1	100	77.709	ENSTNIG00000018803	wdhd1	100	77.362	Tetraodon_nigroviridis
ENSONIG00000007084	wdhd1	99	56.918	ENSTTRG00000003314	WDHD1	99	56.518	Tursiops_truncatus
ENSONIG00000007084	wdhd1	61	64.783	ENSUAMG00000015360	-	96	65.072	Ursus_americanus
ENSONIG00000007084	wdhd1	99	59.353	ENSUMAG00000015946	WDHD1	99	59.162	Ursus_maritimus
ENSONIG00000007084	wdhd1	99	58.896	ENSVPAG00000008394	WDHD1	99	58.509	Vicugna_pacos
ENSONIG00000007084	wdhd1	99	59.381	ENSVVUG00000029613	WDHD1	96	70.068	Vulpes_vulpes
ENSONIG00000007084	wdhd1	100	57.890	ENSXETG00000012210	wdhd1	100	57.491	Xenopus_tropicalis