EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000007172 (Gene tree)
Gene ID
-
Gene Symbol
rbms3
Alias
-
Full Name
RNA binding motif%2C single stranded interacting protein
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
155172 bases
Position
chrGL831158.1:2347898-2503069
Accession
ZDB-GENE-060929-244
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000009043RRM_1PF00076.223.1e-3212
ENSONIP00000009043RRM_1PF00076.223.1e-3222
ENSONIP00000009044RRM_1PF00076.223.4e-3212
ENSONIP00000009044RRM_1PF00076.223.4e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000009049-1239-ENSONIP00000009044412 (aa)-I3JJK0
ENSONIT00000009048-1493-ENSONIP00000009043398 (aa)-I3JJJ9
Gene Model
Click here to download ENSONIG00000007172's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007172's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000007172rbms38968.519ENSONIG00000012198rbms2b8567.989
ENSONIG00000007172rbms37081.100ENSONIG00000019676-9980.756
ENSONIG00000007172rbms37662.893ENSONIG00000003329rbms1a8361.350
ENSONIG00000007172rbms38971.159ENSONIG00000019162rbms2a8675.460
ENSONIG00000007172rbms38968.817ENSONIG00000008934RBMS18868.548
ENSONIG00000007172rbms35135.802ENSONIG00000019463celf46935.802
ENSONIG00000007172rbms35631.304ENSONIG00000003197-5533.862
ENSONIG00000007172rbms37833.750ENSONIG00000006421celf3b6034.615
ENSONIG00000007172rbms36433.750ENSONIG00000019703celf3a7333.750
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000007172rbms310075.236ENSG00000144642RBMS310085.606Homo_sapiens
ENSONIG00000007172rbms39977.197ENSAPOG00000003432-9976.960Acanthochromis_polyacanthus
ENSONIG00000007172rbms310087.472ENSAPOG00000007266rbms39887.472Acanthochromis_polyacanthus
ENSONIG00000007172rbms37075.244ENSAMEG00000005947RBMS310075.082Ailuropoda_melanoleuca
ENSONIG00000007172rbms38987.772ENSACIG00000021113RBMS39687.772Amphilophus_citrinellus
ENSONIG00000007172rbms37387.086ENSACIG00000006987-8187.542Amphilophus_citrinellus
ENSONIG00000007172rbms39084.140ENSAOCG00000024104-9971.330Amphiprion_ocellaris
ENSONIG00000007172rbms310094.245ENSAOCG00000021274rbms310091.335Amphiprion_ocellaris
ENSONIG00000007172rbms38496.581ENSAPEG00000016299rbms39396.581Amphiprion_percula
ENSONIG00000007172rbms39975.795ENSAPEG00000009481-9975.795Amphiprion_percula
ENSONIG00000007172rbms39977.197ENSATEG00000008433-9976.960Anabas_testudineus
ENSONIG00000007172rbms310093.735ENSATEG00000024295rbms310090.824Anabas_testudineus
ENSONIG00000007172rbms39975.822ENSAPLG00000012270RBMS310073.502Anas_platyrhynchos
ENSONIG00000007172rbms310075.472ENSACAG00000028664RBMS39975.472Anolis_carolinensis
ENSONIG00000007172rbms310075.177ENSANAG00000021899RBMS39975.059Aotus_nancymaae
ENSONIG00000007172rbms310096.860ENSACLG00000018506rbms310099.487Astatotilapia_calliptera
ENSONIG00000007172rbms39083.871ENSACLG00000008976-9469.977Astatotilapia_calliptera
ENSONIG00000007172rbms36681.749ENSAMXG00000043770-10081.749Astyanax_mexicanus
ENSONIG00000007172rbms310079.853ENSAMXG00000020388rbms310081.818Astyanax_mexicanus
ENSONIG00000007172rbms310075.887ENSBTAG00000044062RBMS310075.772Bos_taurus
ENSONIG00000007172rbms310075.414ENSCJAG00000004312RBMS39975.297Callithrix_jacchus
ENSONIG00000007172rbms310072.500ENSCAFG00000005464RBMS39775.234Canis_familiaris
ENSONIG00000007172rbms310072.500ENSCAFG00020024980RBMS310072.374Canis_lupus_dingo
ENSONIG00000007172rbms310075.414ENSCHIG00000009144RBMS39778.019Capra_hircus
ENSONIG00000007172rbms37777.844ENSTSYG00000002615RBMS310077.545Carlito_syrichta
ENSONIG00000007172rbms38978.474ENSCAPG00000017783RBMS39378.202Cavia_aperea
ENSONIG00000007172rbms310073.821ENSCPOG00000006457RBMS39778.261Cavia_porcellus
ENSONIG00000007172rbms310075.177ENSCCAG00000008671RBMS39975.059Cebus_capucinus
ENSONIG00000007172rbms310074.941ENSCATG00000013222RBMS39974.822Cercocebus_atys
ENSONIG00000007172rbms310075.472ENSCLAG00000005866RBMS39778.261Chinchilla_lanigera
ENSONIG00000007172rbms36678.102ENSCSAG00000009655RBMS39977.737Chlorocebus_sabaeus
ENSONIG00000007172rbms38584.000ENSCHOG00000000758RBMS38178.310Choloepus_hoffmanni
ENSONIG00000007172rbms310075.943ENSCPBG00000022678RBMS39975.943Chrysemys_picta_bellii
ENSONIG00000007172rbms310075.177ENSCANG00000032137RBMS39975.059Colobus_angolensis_palliatus
ENSONIG00000007172rbms310070.991ENSCGRG00001007243Rbms39973.585Cricetulus_griseus_chok1gshd
ENSONIG00000007172rbms310071.158ENSCGRG00000004599Rbms39974.048Cricetulus_griseus_crigri
ENSONIG00000007172rbms310087.793ENSCSEG00000010011RBMS310085.915Cynoglossus_semilaevis
ENSONIG00000007172rbms310077.123ENSCSEG00000014677-9487.500Cynoglossus_semilaevis
ENSONIG00000007172rbms39381.654ENSCVAG00000022814-9583.607Cyprinodon_variegatus
ENSONIG00000007172rbms310089.100ENSCVAG00000022354rbms310089.336Cyprinodon_variegatus
ENSONIG00000007172rbms310077.778ENSDARG00000044574rbms38998.438Danio_rerio
ENSONIG00000007172rbms310077.887ENSDNOG00000016645RBMS310077.641Dasypus_novemcinctus
ENSONIG00000007172rbms310075.236ENSDORG00000007220Rbms39777.778Dipodomys_ordii
ENSONIG00000007172rbms38264.407ENSETEG00000009485-8164.407Echinops_telfairi
ENSONIG00000007172rbms36255.769ENSEBUG00000005830rbms38355.769Eptatretus_burgeri
ENSONIG00000007172rbms310078.133ENSEASG00005006152RBMS39977.887Equus_asinus_asinus
ENSONIG00000007172rbms310075.177ENSECAG00000017871RBMS39777.778Equus_caballus
ENSONIG00000007172rbms38966.247ENSEEUG00000014337RBMS39769.091Erinaceus_europaeus
ENSONIG00000007172rbms39381.912ENSELUG00000006905-9887.097Esox_lucius
ENSONIG00000007172rbms310076.995ENSELUG00000002862rbms39484.011Esox_lucius
ENSONIG00000007172rbms310074.941ENSFCAG00000002130RBMS39777.536Felis_catus
ENSONIG00000007172rbms310075.943ENSFALG00000009165RBMS39975.943Ficedula_albicollis
ENSONIG00000007172rbms310075.000ENSFDAG00000008278RBMS39777.778Fukomys_damarensis
ENSONIG00000007172rbms39977.751ENSFHEG00000004787RBMS39584.824Fundulus_heteroclitus
ENSONIG00000007172rbms39078.228ENSGMOG00000002600-9378.149Gadus_morhua
ENSONIG00000007172rbms310075.943ENSGALG00000011439RBMS39975.943Gallus_gallus
ENSONIG00000007172rbms39976.960ENSGAFG00000003329-9976.485Gambusia_affinis
ENSONIG00000007172rbms310090.284ENSGAFG00000000168rbms39596.206Gambusia_affinis
ENSONIG00000007172rbms36678.545ENSGAGG00000004039RBMS310078.182Gopherus_agassizii
ENSONIG00000007172rbms310075.177ENSGGOG00000007228RBMS39975.059Gorilla_gorilla
ENSONIG00000007172rbms310074.091ENSHBUG00000019785-9673.636Haplochromis_burtoni
ENSONIG00000007172rbms37192.308ENSHBUG00000021196rbms310092.308Haplochromis_burtoni
ENSONIG00000007172rbms310075.000ENSHGLG00000002170RBMS39777.778Heterocephalus_glaber_female
ENSONIG00000007172rbms310075.000ENSHGLG00100014278RBMS39777.778Heterocephalus_glaber_male
ENSONIG00000007172rbms39975.829ENSHCOG00000007894-9975.355Hippocampus_comes
ENSONIG00000007172rbms310077.358ENSIPUG00000017680rbms310079.245Ictalurus_punctatus
ENSONIG00000007172rbms310075.236ENSSTOG00000006324RBMS39778.019Ictidomys_tridecemlineatus
ENSONIG00000007172rbms39877.228ENSJJAG00000014708Rbms39971.698Jaculus_jaculus
ENSONIG00000007172rbms310089.044ENSKMAG00000020500rbms310089.044Kryptolebias_marmoratus
ENSONIG00000007172rbms39976.960ENSKMAG00000012586-9976.722Kryptolebias_marmoratus
ENSONIG00000007172rbms39976.190ENSLBEG00000027388-9976.429Labrus_bergylta
ENSONIG00000007172rbms36185.171ENSLBEG00000006677rbms39785.171Labrus_bergylta
ENSONIG00000007172rbms310077.830ENSLACG00000010581RBMS310077.594Latimeria_chalumnae
ENSONIG00000007172rbms37182.653ENSLOCG00000002328rbms310082.313Lepisosteus_oculatus
ENSONIG00000007172rbms310072.500ENSLAFG00000000354RBMS310072.374Loxodonta_africana
ENSONIG00000007172rbms310075.236ENSMFAG00000033300RBMS39778.019Macaca_fascicularis
ENSONIG00000007172rbms310075.236ENSMMUG00000004404RBMS39778.019Macaca_mulatta
ENSONIG00000007172rbms310075.177ENSMNEG00000035839RBMS39579.634Macaca_nemestrina
ENSONIG00000007172rbms310074.941ENSMLEG00000029464RBMS39974.822Mandrillus_leucophaeus
ENSONIG00000007172rbms38885.246ENSMAMG00000002176-8184.973Mastacembelus_armatus
ENSONIG00000007172rbms310094.377ENSMAMG00000024043rbms310094.377Mastacembelus_armatus
ENSONIG00000007172rbms310096.860ENSMZEG00005006308rbms310093.868Maylandia_zebra
ENSONIG00000007172rbms310074.654ENSMZEG00005026469-9674.654Maylandia_zebra
ENSONIG00000007172rbms310070.991ENSMAUG00000016436Rbms39973.585Mesocricetus_auratus
ENSONIG00000007172rbms310075.650ENSMICG00000049249RBMS39975.534Microcebus_murinus
ENSONIG00000007172rbms310072.642ENSMOCG00000006997Rbms39973.585Microtus_ochrogaster
ENSONIG00000007172rbms39976.190ENSMMOG00000015071-9976.190Mola_mola
ENSONIG00000007172rbms38496.562ENSMMOG00000008471RBMS39596.562Mola_mola
ENSONIG00000007172rbms310066.886ENSMODG00000015125RBMS38777.749Monodelphis_domestica
ENSONIG00000007172rbms310093.269ENSMALG00000019536RBMS310090.610Monopterus_albus
ENSONIG00000007172rbms39980.535ENSMALG00000009155-9977.435Monopterus_albus
ENSONIG00000007172rbms310072.642MGP_CAROLIEiJ_G0032783Rbms39973.571Mus_caroli
ENSONIG00000007172rbms310071.158ENSMUSG00000039607Rbms39981.517Mus_musculus
ENSONIG00000007172rbms310070.991MGP_PahariEiJ_G0015650Rbms39981.517Mus_pahari
ENSONIG00000007172rbms310071.158MGP_SPRETEiJ_G0033930Rbms39981.517Mus_spretus
ENSONIG00000007172rbms310072.500ENSMPUG00000011956RBMS310072.374Mustela_putorius_furo
ENSONIG00000007172rbms310075.236ENSMLUG00000000659RBMS39778.019Myotis_lucifugus
ENSONIG00000007172rbms310073.286ENSNGAG00000014039Rbms39974.645Nannospalax_galili
ENSONIG00000007172rbms39977.381ENSNBRG00000018065-9977.143Neolamprologus_brichardi
ENSONIG00000007172rbms310075.177ENSNLEG00000004129RBMS39975.059Nomascus_leucogenys
ENSONIG00000007172rbms39965.909ENSMEUG00000004772RBMS310066.895Notamacropus_eugenii
ENSONIG00000007172rbms39972.893ENSOPRG00000006808RBMS38375.644Ochotona_princeps
ENSONIG00000007172rbms310075.177ENSODEG00000003651RBMS39975.059Octodon_degus
ENSONIG00000007172rbms310074.201ENSOANG00000010529RBMS39775.701Ornithorhynchus_anatinus
ENSONIG00000007172rbms310072.045ENSOCUG00000004840RBMS39775.000Oryctolagus_cuniculus
ENSONIG00000007172rbms39977.435ENSORLG00000002306-9977.197Oryzias_latipes
ENSONIG00000007172rbms310087.678ENSORLG00000005370RBMS310087.441Oryzias_latipes
ENSONIG00000007172rbms310091.358ENSORLG00020022674RBMS310091.111Oryzias_latipes_hni
ENSONIG00000007172rbms39977.435ENSORLG00020008496-9977.197Oryzias_latipes_hni
ENSONIG00000007172rbms39977.435ENSORLG00015015719-9977.197Oryzias_latipes_hsok
ENSONIG00000007172rbms310091.605ENSORLG00015005509rbms310091.358Oryzias_latipes_hsok
ENSONIG00000007172rbms310088.626ENSOMEG00000014805RBMS39594.038Oryzias_melastigma
ENSONIG00000007172rbms39382.171ENSOMEG00000007677-9584.426Oryzias_melastigma
ENSONIG00000007172rbms310072.045ENSOARG00000014684RBMS39774.766Ovis_aries
ENSONIG00000007172rbms310075.177ENSPPAG00000036519RBMS39975.059Pan_paniscus
ENSONIG00000007172rbms310075.176ENSPPRG00000002761RBMS39974.347Panthera_pardus
ENSONIG00000007172rbms310077.536ENSPTIG00000011568RBMS310074.584Panthera_tigris_altaica
ENSONIG00000007172rbms310075.236ENSPTRG00000014709RBMS39778.019Pan_troglodytes
ENSONIG00000007172rbms310075.177ENSPANG00000010234RBMS310072.540Papio_anubis
ENSONIG00000007172rbms36685.932ENSPKIG00000007989-10085.932Paramormyrops_kingsleyae
ENSONIG00000007172rbms310075.708ENSPSIG00000005269RBMS39975.708Pelodiscus_sinensis
ENSONIG00000007172rbms38493.948ENSPMGG00000021544rbms38594.801Periophthalmus_magnuspinnatus
ENSONIG00000007172rbms39382.383ENSPMGG00000021683-9584.658Periophthalmus_magnuspinnatus
ENSONIG00000007172rbms39969.398ENSPEMG00000001117Rbms310072.048Peromyscus_maniculatus_bairdii
ENSONIG00000007172rbms38280.655ENSPCIG00000006106RBMS38885.849Phascolarctos_cinereus
ENSONIG00000007172rbms310090.284ENSPFOG00000017887rbms310090.284Poecilia_formosa
ENSONIG00000007172rbms37893.478ENSPLAG00000016866-8393.478Poecilia_latipinna
ENSONIG00000007172rbms39976.722ENSPMEG00000002993-9976.247Poecilia_mexicana
ENSONIG00000007172rbms39083.871ENSPREG00000018221-9785.214Poecilia_reticulata
ENSONIG00000007172rbms39988.783ENSPREG00000011880rbms39791.687Poecilia_reticulata
ENSONIG00000007172rbms310060.455ENSPPYG00000014050RBMS38062.850Pongo_abelii
ENSONIG00000007172rbms310058.636ENSPCAG00000006307RBMS39958.447Procavia_capensis
ENSONIG00000007172rbms39975.355ENSPCOG00000017136RBMS310075.238Propithecus_coquereli
ENSONIG00000007172rbms310065.000ENSPVAG00000014037RBMS38378.297Pteropus_vampyrus
ENSONIG00000007172rbms310096.618ENSPNYG00000010546rbms310093.632Pundamilia_nyererei
ENSONIG00000007172rbms39977.381ENSPNYG00000012624-9977.143Pundamilia_nyererei
ENSONIG00000007172rbms310076.651ENSPNAG00000001800rbms310078.538Pygocentrus_nattereri
ENSONIG00000007172rbms310070.991ENSRNOG00000025881Rbms310073.585Rattus_norvegicus
ENSONIG00000007172rbms310075.414ENSRBIG00000035863RBMS39975.297Rhinopithecus_bieti
ENSONIG00000007172rbms38980.628ENSRROG00000027512RBMS39380.366Rhinopithecus_roxellana
ENSONIG00000007172rbms310075.177ENSSBOG00000020232RBMS39975.059Saimiri_boliviensis_boliviensis
ENSONIG00000007172rbms38976.694ENSSHAG00000002411RBMS39477.778Sarcophilus_harrisii
ENSONIG00000007172rbms39978.043ENSSFOG00015008578rbms39585.165Scleropages_formosus
ENSONIG00000007172rbms310086.183ENSSMAG00000004997rbms310093.750Scophthalmus_maximus
ENSONIG00000007172rbms38484.150ENSSMAG00000020065-8886.810Scophthalmus_maximus
ENSONIG00000007172rbms39993.510ENSSDUG00000013656RBMS310093.510Seriola_dumerili
ENSONIG00000007172rbms39977.197ENSSDUG00000019287-9976.960Seriola_dumerili
ENSONIG00000007172rbms310090.210ENSSLDG00000020276RBMS310090.210Seriola_lalandi_dorsalis
ENSONIG00000007172rbms39977.197ENSSLDG00000013224-9976.960Seriola_lalandi_dorsalis
ENSONIG00000007172rbms37968.421ENSSARG00000000695RBMS39268.235Sorex_araneus
ENSONIG00000007172rbms37177.076ENSSPUG00000017197RBMS39876.923Sphenodon_punctatus
ENSONIG00000007172rbms310094.245ENSSPAG00000020693rbms39896.056Stegastes_partitus
ENSONIG00000007172rbms39977.069ENSSPAG00000003983-9976.596Stegastes_partitus
ENSONIG00000007172rbms310078.133ENSSSCG00000036381RBMS39977.887Sus_scrofa
ENSONIG00000007172rbms37877.745ENSTGUG00000003572RBMS310077.612Taeniopygia_guttata
ENSONIG00000007172rbms39966.051ENSTRUG00000007482-8979.224Takifugu_rubripes
ENSONIG00000007172rbms310087.793ENSTRUG00000021719RBMS310087.793Takifugu_rubripes
ENSONIG00000007172rbms37981.579ENSTBEG00000005362RBMS39281.471Tupaia_belangeri
ENSONIG00000007172rbms39971.982ENSTTRG00000006202RBMS310071.854Tursiops_truncatus
ENSONIG00000007172rbms310072.500ENSUMAG00000000263RBMS39775.234Ursus_maritimus
ENSONIG00000007172rbms38970.052ENSVPAG00000003842RBMS39269.895Vicugna_pacos
ENSONIG00000007172rbms38979.740ENSVVUG00000004660RBMS39191.429Vulpes_vulpes
ENSONIG00000007172rbms37174.598ENSXETG00000032055RBMS39974.434Xenopus_tropicalis
ENSONIG00000007172rbms39367.939ENSXCOG00000019600-9569.086Xiphophorus_couchianus
ENSONIG00000007172rbms39976.960ENSXMAG00000014382-9976.485Xiphophorus_maculatus
ENSONIG00000007172rbms310091.872ENSXMAG00000021783rbms310092.611Xiphophorus_maculatus

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