EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000007227 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 14887 bases
Position: chrGL831279.1:268742-283628
Accession: 100694091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009112	AARP2CN	PF08142.12	9.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009117	-	5015	-	ENSONIP00000009112	1200 (aa)	XP_005471289	I3JJR8

Gene Model

Click here to download ENSONIG00000007227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007227	bms1	99	61.253	ENSG00000165733	BMS1	89	68.949	Homo_sapiens
ENSONIG00000007227	bms1	88	82.237	ENSAPOG00000002296	bms1	100	82.092	Acanthochromis_polyacanthus
ENSONIG00000007227	bms1	99	61.783	ENSAMEG00000016834	BMS1	90	68.262	Ailuropoda_melanoleuca
ENSONIG00000007227	bms1	99	84.641	ENSACIG00000002588	bms1	100	84.405	Amphilophus_citrinellus
ENSONIG00000007227	bms1	100	82.801	ENSAOCG00000018088	bms1	100	83.005	Amphiprion_ocellaris
ENSONIG00000007227	bms1	100	83.019	ENSAPEG00000014673	bms1	100	83.388	Amphiprion_percula
ENSONIG00000007227	bms1	100	81.373	ENSATEG00000023465	bms1	100	81.127	Anabas_testudineus
ENSONIG00000007227	bms1	95	62.016	ENSAPLG00000003759	BMS1	88	71.378	Anas_platyrhynchos
ENSONIG00000007227	bms1	98	64.425	ENSACAG00000004537	-	89	68.710	Anolis_carolinensis
ENSONIG00000007227	bms1	96	68.000	ENSANAG00000023432	BMS1	89	67.840	Aotus_nancymaae
ENSONIG00000007227	bms1	100	96.924	ENSACLG00000001294	bms1	100	96.924	Astatotilapia_calliptera
ENSONIG00000007227	bms1	94	76.568	ENSAMXG00000011236	bms1	100	69.261	Astyanax_mexicanus
ENSONIG00000007227	bms1	53	68.088	ENSBTAG00000012878	BMS1	88	69.243	Bos_taurus
ENSONIG00000007227	bms1	85	55.025	WBGene00022021	Y61A9LA.10	93	57.692	Caenorhabditis_elegans
ENSONIG00000007227	bms1	99	66.157	ENSCJAG00000021705	BMS1	89	68.320	Callithrix_jacchus
ENSONIG00000007227	bms1	54	67.132	ENSCAFG00000007114	BMS1	89	68.109	Canis_familiaris
ENSONIG00000007227	bms1	54	67.132	ENSCAFG00020025282	BMS1	89	68.109	Canis_lupus_dingo
ENSONIG00000007227	bms1	99	61.989	ENSCHIG00000023251	BMS1	89	69.082	Capra_hircus
ENSONIG00000007227	bms1	99	58.057	ENSCAPG00000008652	BMS1	90	63.486	Cavia_aperea
ENSONIG00000007227	bms1	99	61.521	ENSCPOG00000000502	BMS1	90	67.685	Cavia_porcellus
ENSONIG00000007227	bms1	53	58.216	ENSCCAG00000024969	-	88	58.615	Cebus_capucinus
ENSONIG00000007227	bms1	53	68.868	ENSCATG00000030625	-	87	70.974	Cercocebus_atys
ENSONIG00000007227	bms1	89	47.323	ENSCATG00000008695	-	78	58.482	Cercocebus_atys
ENSONIG00000007227	bms1	99	62.160	ENSCLAG00000002446	BMS1	89	68.167	Chinchilla_lanigera
ENSONIG00000007227	bms1	96	68.868	ENSCSAG00000011118	BMS1	89	68.631	Chlorocebus_sabaeus
ENSONIG00000007227	bms1	99	59.969	ENSCHOG00000011055	BMS1	89	67.311	Choloepus_hoffmanni
ENSONIG00000007227	bms1	98	65.138	ENSCPBG00000025581	BMS1	88	70.000	Chrysemys_picta_bellii
ENSONIG00000007227	bms1	83	62.972	ENSCING00000003181	-	96	62.469	Ciona_intestinalis
ENSONIG00000007227	bms1	83	53.412	ENSCSAVG00000004113	-	92	50.933	Ciona_savignyi
ENSONIG00000007227	bms1	99	62.423	ENSCANG00000011609	BMS1	89	68.949	Colobus_angolensis_palliatus
ENSONIG00000007227	bms1	98	62.539	ENSCGRG00001019461	Bms1	91	67.778	Cricetulus_griseus_chok1gshd
ENSONIG00000007227	bms1	98	62.539	ENSCGRG00000009016	Bms1	91	67.778	Cricetulus_griseus_crigri
ENSONIG00000007227	bms1	100	75.522	ENSCSEG00000002469	bms1	100	75.939	Cynoglossus_semilaevis
ENSONIG00000007227	bms1	100	79.851	ENSCVAG00000008371	bms1	100	79.950	Cyprinodon_variegatus
ENSONIG00000007227	bms1	99	71.716	ENSDARG00000054154	bms1	99	72.016	Danio_rerio
ENSONIG00000007227	bms1	99	61.273	ENSDNOG00000015761	BMS1	89	67.955	Dasypus_novemcinctus
ENSONIG00000007227	bms1	99	60.802	ENSDORG00000002982	Bms1	89	68.810	Dipodomys_ordii
ENSONIG00000007227	bms1	84	66.071	ENSETEG00000009554	BMS1	79	66.071	Echinops_telfairi
ENSONIG00000007227	bms1	99	61.586	ENSEASG00005006894	BMS1	89	69.082	Equus_asinus_asinus
ENSONIG00000007227	bms1	99	62.191	ENSECAG00000001358	BMS1	89	69.082	Equus_caballus
ENSONIG00000007227	bms1	100	71.867	ENSELUG00000001756	bms1	100	72.263	Esox_lucius
ENSONIG00000007227	bms1	99	61.568	ENSFCAG00000011220	BMS1	89	68.489	Felis_catus
ENSONIG00000007227	bms1	96	69.726	ENSFALG00000006882	BMS1	87	69.952	Ficedula_albicollis
ENSONIG00000007227	bms1	99	64.663	ENSFDAG00000001422	BMS1	95	65.688	Fukomys_damarensis
ENSONIG00000007227	bms1	100	80.795	ENSFHEG00000003367	bms1	100	80.297	Fundulus_heteroclitus
ENSONIG00000007227	bms1	99	70.504	ENSGMOG00000000718	bms1	99	69.869	Gadus_morhua
ENSONIG00000007227	bms1	99	65.255	ENSGALG00000002624	BMS1	88	69.565	Gallus_gallus
ENSONIG00000007227	bms1	99	80.257	ENSGACG00000015334	bms1	89	80.257	Gasterosteus_aculeatus
ENSONIG00000007227	bms1	97	69.417	ENSGAGG00000003467	BMS1	99	63.658	Gopherus_agassizii
ENSONIG00000007227	bms1	100	96.758	ENSHBUG00000022628	bms1	100	96.758	Haplochromis_burtoni
ENSONIG00000007227	bms1	99	61.298	ENSHGLG00000000477	BMS1	90	68.006	Heterocephalus_glaber_female
ENSONIG00000007227	bms1	99	61.258	ENSHGLG00100002176	BMS1	90	68.006	Heterocephalus_glaber_male
ENSONIG00000007227	bms1	99	78.392	ENSHCOG00000017604	bms1	99	78.326	Hippocampus_comes
ENSONIG00000007227	bms1	99	70.048	ENSIPUG00000017855	bms1	99	71.065	Ictalurus_punctatus
ENSONIG00000007227	bms1	99	61.432	ENSSTOG00000015063	BMS1	90	68.038	Ictidomys_tridecemlineatus
ENSONIG00000007227	bms1	97	66.311	ENSJJAG00000017328	Bms1	90	67.457	Jaculus_jaculus
ENSONIG00000007227	bms1	65	76.697	ENSKMAG00000021982	bms1	97	75.862	Kryptolebias_marmoratus
ENSONIG00000007227	bms1	100	77.878	ENSLBEG00000028208	bms1	100	79.125	Labrus_bergylta
ENSONIG00000007227	bms1	99	56.444	ENSLACG00000001600	BMS1	89	64.381	Latimeria_chalumnae
ENSONIG00000007227	bms1	97	70.290	ENSLOCG00000012914	bms1	99	70.897	Lepisosteus_oculatus
ENSONIG00000007227	bms1	99	66.418	ENSLAFG00000006250	BMS1	89	67.685	Loxodonta_africana
ENSONIG00000007227	bms1	88	66.729	ENSMFAG00000037771	BMS1	99	65.814	Macaca_fascicularis
ENSONIG00000007227	bms1	86	63.238	ENSMMUG00000007426	-	83	64.143	Macaca_mulatta
ENSONIG00000007227	bms1	80	53.422	ENSMLEG00000029084	-	77	57.623	Mandrillus_leucophaeus
ENSONIG00000007227	bms1	100	80.279	ENSMAMG00000020855	bms1	100	80.595	Mastacembelus_armatus
ENSONIG00000007227	bms1	100	96.924	ENSMZEG00005005663	bms1	100	96.924	Maylandia_zebra
ENSONIG00000007227	bms1	91	69.082	ENSMGAG00000001170	BMS1	87	69.565	Meleagris_gallopavo
ENSONIG00000007227	bms1	98	62.028	ENSMAUG00000002195	Bms1	91	67.460	Mesocricetus_auratus
ENSONIG00000007227	bms1	99	65.745	ENSMICG00000009977	BMS1	89	67.576	Microcebus_murinus
ENSONIG00000007227	bms1	98	65.663	ENSMOCG00000002038	Bms1	90	68.006	Microtus_ochrogaster
ENSONIG00000007227	bms1	100	79.468	ENSMMOG00000000977	bms1	100	78.340	Mola_mola
ENSONIG00000007227	bms1	99	66.425	ENSMODG00000001177	BMS1	89	70.144	Monodelphis_domestica
ENSONIG00000007227	bms1	100	82.397	ENSMALG00000009680	bms1	100	82.066	Monopterus_albus
ENSONIG00000007227	bms1	68	81.197	MGP_CAROLIEiJ_G0028785	-	77	81.197	Mus_caroli
ENSONIG00000007227	bms1	98	61.581	ENSMUSG00000030138	Bms1	90	66.879	Mus_musculus
ENSONIG00000007227	bms1	98	61.622	MGP_PahariEiJ_G0022539	Bms1	96	66.296	Mus_pahari
ENSONIG00000007227	bms1	98	61.502	MGP_SPRETEiJ_G0029816	Bms1	90	66.879	Mus_spretus
ENSONIG00000007227	bms1	96	68.346	ENSMPUG00000017276	BMS1	90	68.421	Mustela_putorius_furo
ENSONIG00000007227	bms1	99	61.443	ENSMLUG00000003260	BMS1	89	68.065	Myotis_lucifugus
ENSONIG00000007227	bms1	99	56.672	ENSNGAG00000015258	Bms1	99	57.352	Nannospalax_galili
ENSONIG00000007227	bms1	99	60.402	ENSNLEG00000015791	BMS1	89	66.879	Nomascus_leucogenys
ENSONIG00000007227	bms1	85	77.586	ENSOPRG00000005195	BMS1	80	77.641	Ochotona_princeps
ENSONIG00000007227	bms1	99	65.478	ENSODEG00000005554	BMS1	90	68.167	Octodon_degus
ENSONIG00000007227	bms1	97	65.406	ENSOANG00000000662	-	89	67.147	Ornithorhynchus_anatinus
ENSONIG00000007227	bms1	95	68.971	ENSOCUG00000005354	BMS1	89	68.971	Oryctolagus_cuniculus
ENSONIG00000007227	bms1	99	80.017	ENSORLG00000014655	bms1	99	80.167	Oryzias_latipes
ENSONIG00000007227	bms1	52	81.965	ENSORLG00020016246	bms1	99	77.048	Oryzias_latipes_hni
ENSONIG00000007227	bms1	52	82.126	ENSORLG00015014183	bms1	99	77.325	Oryzias_latipes_hsok
ENSONIG00000007227	bms1	99	80.166	ENSOMEG00000015042	bms1	99	80.264	Oryzias_melastigma
ENSONIG00000007227	bms1	98	66.717	ENSOGAG00000006511	BMS1	89	68.960	Otolemur_garnettii
ENSONIG00000007227	bms1	99	61.875	ENSOARG00000003900	BMS1	89	69.243	Ovis_aries
ENSONIG00000007227	bms1	99	58.423	ENSPPAG00000027837	BMS1	89	65.129	Pan_paniscus
ENSONIG00000007227	bms1	99	61.355	ENSPPRG00000001311	BMS1	89	68.489	Panthera_pardus
ENSONIG00000007227	bms1	99	60.541	ENSPTIG00000009652	BMS1	89	66.667	Panthera_tigris_altaica
ENSONIG00000007227	bms1	99	61.485	ENSPTRG00000002441	BMS1	89	69.108	Pan_troglodytes
ENSONIG00000007227	bms1	97	75.279	ENSPKIG00000008165	bms1	88	77.352	Paramormyrops_kingsleyae
ENSONIG00000007227	bms1	97	66.929	ENSPSIG00000006481	BMS1	89	68.921	Pelodiscus_sinensis
ENSONIG00000007227	bms1	98	55.935	ENSPEMG00000022467	Bms1	89	63.339	Peromyscus_maniculatus_bairdii
ENSONIG00000007227	bms1	96	68.167	ENSPCIG00000001339	BMS1	88	74.085	Phascolarctos_cinereus
ENSONIG00000007227	bms1	97	81.481	ENSPFOG00000015180	bms1	99	77.716	Poecilia_formosa
ENSONIG00000007227	bms1	99	78.304	ENSPMEG00000023176	bms1	94	79.385	Poecilia_mexicana
ENSONIG00000007227	bms1	99	78.554	ENSPREG00000002695	bms1	99	79.402	Poecilia_reticulata
ENSONIG00000007227	bms1	57	55.063	ENSPPYG00000002836	-	83	65.448	Pongo_abelii
ENSONIG00000007227	bms1	73	76.190	ENSPCAG00000014528	BMS1	76	64.684	Procavia_capensis
ENSONIG00000007227	bms1	94	65.063	ENSPCOG00000023834	-	87	64.476	Propithecus_coquereli
ENSONIG00000007227	bms1	99	61.376	ENSPVAG00000000725	BMS1	90	68.226	Pteropus_vampyrus
ENSONIG00000007227	bms1	100	91.918	ENSPNYG00000018866	bms1	100	93.388	Pundamilia_nyererei
ENSONIG00000007227	bms1	53	76.361	ENSPNAG00000000676	bms1	100	70.408	Pygocentrus_nattereri
ENSONIG00000007227	bms1	80	61.180	ENSRNOG00000006576	Bms1	88	68.861	Rattus_norvegicus
ENSONIG00000007227	bms1	99	60.277	ENSRROG00000040101	BMS1	88	70.495	Rhinopithecus_roxellana
ENSONIG00000007227	bms1	77	46.809	YPL217C	-	73	55.301	Saccharomyces_cerevisiae
ENSONIG00000007227	bms1	52	68.800	ENSSBOG00000035778	BMS1	90	68.640	Saimiri_boliviensis_boliviensis
ENSONIG00000007227	bms1	99	64.632	ENSSHAG00000005062	BMS1	89	68.810	Sarcophilus_harrisii
ENSONIG00000007227	bms1	54	75.883	ENSSFOG00015022313	bms1	99	69.414	Scleropages_formosus
ENSONIG00000007227	bms1	100	79.113	ENSSMAG00000019966	bms1	100	79.694	Scophthalmus_maximus
ENSONIG00000007227	bms1	100	81.286	ENSSDUG00000016875	bms1	100	82.262	Seriola_dumerili
ENSONIG00000007227	bms1	100	80.972	ENSSLDG00000015199	bms1	100	82.429	Seriola_lalandi_dorsalis
ENSONIG00000007227	bms1	52	73.000	ENSSARG00000014407	BMS1	66	73.000	Sorex_araneus
ENSONIG00000007227	bms1	99	69.132	ENSSPUG00000014454	BMS1	89	68.982	Sphenodon_punctatus
ENSONIG00000007227	bms1	99	61.598	ENSSSCG00000010198	BMS1	89	68.489	Sus_scrofa
ENSONIG00000007227	bms1	95	70.275	ENSTGUG00000006302	-	87	70.275	Taeniopygia_guttata
ENSONIG00000007227	bms1	99	71.333	ENSTRUG00000008028	bms1	99	71.595	Takifugu_rubripes
ENSONIG00000007227	bms1	99	73.312	ENSTNIG00000006216	bms1	90	74.437	Tetraodon_nigroviridis
ENSONIG00000007227	bms1	65	70.805	ENSTBEG00000001673	-	63	70.847	Tupaia_belangeri
ENSONIG00000007227	bms1	99	61.622	ENSTTRG00000007983	BMS1	89	68.599	Tursiops_truncatus
ENSONIG00000007227	bms1	99	62.026	ENSUAMG00000023996	BMS1	89	68.760	Ursus_americanus
ENSONIG00000007227	bms1	99	61.949	ENSUMAG00000016523	BMS1	90	68.102	Ursus_maritimus
ENSONIG00000007227	bms1	71	73.815	ENSVPAG00000007477	BMS1	82	71.789	Vicugna_pacos
ENSONIG00000007227	bms1	97	67.985	ENSVVUG00000021305	BMS1	91	68.109	Vulpes_vulpes
ENSONIG00000007227	bms1	98	62.066	ENSXETG00000008158	bms1	99	62.600	Xenopus_tropicalis
ENSONIG00000007227	bms1	99	75.990	ENSXCOG00000000506	bms1	98	87.351	Xiphophorus_couchianus
ENSONIG00000007227	bms1	99	77.907	ENSXMAG00000014236	bms1	99	78.387	Xiphophorus_maculatus