EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000007282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 185877 bases
Position: chrGL831279.1:1500477-1686353
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009184	Fox-1_C	PF12414.8	1.4e-44	1	1
ENSONIP00000009185	Fox-1_C	PF12414.8	2e-44	1	1
ENSONIP00000009184	RRM_1	PF00076.22	1e-18	1	1
ENSONIP00000009185	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009190	-	1101	-	ENSONIP00000009185	367 (aa)	-	I3JJZ1
ENSONIT00000009189	-	1552	-	ENSONIP00000009184	343 (aa)	-	I3JJZ0

Gene Model

Click here to download ENSONIG00000007282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000007282	-	99	80.826	ENSONIG00000009549	rbfox3b	92	79.941
ENSONIG00000007282	-	68	63.370	ENSONIG00000017998	rbfox2	92	52.273
ENSONIG00000007282	-	64	72.687	ENSONIG00000012754	rbfox1l	85	57.669
ENSONIG00000007282	-	69	62.319	ENSONIG00000008341	-	95	53.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007282	-	87	82.060	ENSG00000167281	RBFOX3	100	81.329	Homo_sapiens
ENSONIG00000007282	-	95	75.077	ENSAPOG00000015658	-	90	71.264	Acanthochromis_polyacanthus
ENSONIG00000007282	-	99	80.531	ENSAPOG00000021630	rbfox3b	88	82.154	Acanthochromis_polyacanthus
ENSONIG00000007282	-	99	73.784	ENSAMEG00000014170	RBFOX3	89	75.141	Ailuropoda_melanoleuca
ENSONIG00000007282	-	92	79.299	ENSACIG00000010817	rbfox3b	99	78.344	Amphilophus_citrinellus
ENSONIG00000007282	-	92	81.899	ENSACIG00000003768	-	90	83.742	Amphilophus_citrinellus
ENSONIG00000007282	-	95	88.308	ENSAOCG00000010786	-	86	88.308	Amphiprion_ocellaris
ENSONIG00000007282	-	99	80.531	ENSAOCG00000012358	rbfox3b	92	79.646	Amphiprion_ocellaris
ENSONIG00000007282	-	95	74.154	ENSAPEG00000019081	rbfox3b	87	72.923	Amphiprion_percula
ENSONIG00000007282	-	97	81.667	ENSAPEG00000015891	-	87	81.667	Amphiprion_percula
ENSONIG00000007282	-	87	85.000	ENSATEG00000023101	-	96	85.079	Anabas_testudineus
ENSONIG00000007282	-	92	74.128	ENSATEG00000019945	rbfox3b	99	75.000	Anabas_testudineus
ENSONIG00000007282	-	95	80.122	ENSACAG00000016093	RBFOX3	91	79.817	Anolis_carolinensis
ENSONIG00000007282	-	87	80.731	ENSANAG00000023457	RBFOX3	100	80.063	Aotus_nancymaae
ENSONIG00000007282	-	99	80.826	ENSACLG00000020011	rbfox3b	100	82.484	Astatotilapia_calliptera
ENSONIG00000007282	-	95	99.077	ENSACLG00000025552	-	89	99.077	Astatotilapia_calliptera
ENSONIG00000007282	-	97	78.507	ENSAMXG00000042841	rbfox3b	92	79.141	Astyanax_mexicanus
ENSONIG00000007282	-	98	82.006	ENSAMXG00000037246	rbfox3a	98	83.636	Astyanax_mexicanus
ENSONIG00000007282	-	74	81.176	ENSBTAG00000006280	RBFOX3	100	59.043	Bos_taurus
ENSONIG00000007282	-	87	71.096	ENSCJAG00000009563	RBFOX3	100	70.248	Callithrix_jacchus
ENSONIG00000007282	-	74	86.220	ENSCAFG00000005547	RBFOX3	85	88.333	Canis_familiaris
ENSONIG00000007282	-	87	70.690	ENSCAFG00020008126	RBFOX3	96	70.523	Canis_lupus_dingo
ENSONIG00000007282	-	87	69.828	ENSCHIG00000009124	RBFOX3	96	70.523	Capra_hircus
ENSONIG00000007282	-	87	70.690	ENSTSYG00000029617	RBFOX3	100	71.901	Carlito_syrichta
ENSONIG00000007282	-	87	69.429	ENSCPOG00000021703	RBFOX3	100	70.137	Cavia_porcellus
ENSONIG00000007282	-	87	80.731	ENSCCAG00000028450	RBFOX3	100	80.063	Cebus_capucinus
ENSONIG00000007282	-	87	82.060	ENSCATG00000018349	RBFOX3	100	81.329	Cercocebus_atys
ENSONIG00000007282	-	87	70.115	ENSCLAG00000006449	RBFOX3	100	71.350	Chinchilla_lanigera
ENSONIG00000007282	-	87	82.060	ENSCSAG00000002355	RBFOX3	100	81.329	Chlorocebus_sabaeus
ENSONIG00000007282	-	96	79.758	ENSCPBG00000010904	RBFOX3	100	81.587	Chrysemys_picta_bellii
ENSONIG00000007282	-	87	82.060	ENSCANG00000043120	RBFOX3	100	81.329	Colobus_angolensis_palliatus
ENSONIG00000007282	-	87	67.908	ENSCGRG00001019476	Rbfox3	100	70.330	Cricetulus_griseus_chok1gshd
ENSONIG00000007282	-	87	67.908	ENSCGRG00000003268	Rbfox3	100	70.330	Cricetulus_griseus_crigri
ENSONIG00000007282	-	98	84.478	ENSCSEG00000015567	RBFOX3	88	85.846	Cynoglossus_semilaevis
ENSONIG00000007282	-	94	68.196	ENSCSEG00000020606	RBFOX3	92	66.562	Cynoglossus_semilaevis
ENSONIG00000007282	-	99	80.531	ENSCVAG00000006882	rbfox3b	92	79.646	Cyprinodon_variegatus
ENSONIG00000007282	-	92	72.698	ENSDARG00000074310	rbfox3b	96	75.000	Danio_rerio
ENSONIG00000007282	-	98	82.596	ENSDARG00000010083	rbfox3a	99	84.498	Danio_rerio
ENSONIG00000007282	-	73	69.697	ENSDNOG00000039391	RBFOX3	96	63.014	Dasypus_novemcinctus
ENSONIG00000007282	-	87	61.383	ENSDORG00000005352	Rbfox3	100	60.665	Dipodomys_ordii
ENSONIG00000007282	-	81	58.333	ENSEBUG00000013559	RBFOX3	80	58.276	Eptatretus_burgeri
ENSONIG00000007282	-	95	67.155	ENSEBUG00000002129	RBFOX3	95	68.328	Eptatretus_burgeri
ENSONIG00000007282	-	87	79.801	ENSEASG00005005059	RBFOX3	100	81.703	Equus_asinus_asinus
ENSONIG00000007282	-	87	79.470	ENSECAG00000023811	RBFOX3	100	81.388	Equus_caballus
ENSONIG00000007282	-	77	81.690	ENSEEUG00000013974	RBFOX3	72	90.164	Erinaceus_europaeus
ENSONIG00000007282	-	98	81.194	ENSELUG00000017963	rbfox3b	100	73.248	Esox_lucius
ENSONIG00000007282	-	95	80.428	ENSFCAG00000002555	RBFOX3	100	80.063	Felis_catus
ENSONIG00000007282	-	99	65.684	ENSFALG00000012288	RBFOX3	91	65.416	Ficedula_albicollis
ENSONIG00000007282	-	87	64.286	ENSFDAG00000007489	RBFOX3	100	65.205	Fukomys_damarensis
ENSONIG00000007282	-	92	74.204	ENSFHEG00000008550	rbfox3b	100	73.248	Fundulus_heteroclitus
ENSONIG00000007282	-	92	62.983	ENSGMOG00000019304	-	96	62.707	Gadus_morhua
ENSONIG00000007282	-	95	82.209	ENSGALG00000032889	RBFOX3	90	81.595	Gallus_gallus
ENSONIG00000007282	-	89	82.353	ENSGAFG00000005025	rbfox3b	88	81.373	Gambusia_affinis
ENSONIG00000007282	-	87	74.785	ENSGACG00000002138	-	96	76.099	Gasterosteus_aculeatus
ENSONIG00000007282	-	96	80.060	ENSGAGG00000020025	RBFOX3	100	81.905	Gopherus_agassizii
ENSONIG00000007282	-	87	82.060	ENSGGOG00000012546	RBFOX3	100	81.329	Gorilla_gorilla
ENSONIG00000007282	-	99	80.826	ENSHBUG00000018099	rbfox3b	92	79.941	Haplochromis_burtoni
ENSONIG00000007282	-	100	94.752	ENSHBUG00000023098	-	96	94.752	Haplochromis_burtoni
ENSONIG00000007282	-	87	69.034	ENSHGLG00000008679	RBFOX3	100	70.300	Heterocephalus_glaber_female
ENSONIG00000007282	-	87	65.341	ENSHGLG00100014739	RBFOX3	96	67.302	Heterocephalus_glaber_male
ENSONIG00000007282	-	87	74.086	ENSHCOG00000007444	RBFOX3	82	72.188	Hippocampus_comes
ENSONIG00000007282	-	92	79.618	ENSHCOG00000001863	RBFOX3	92	79.618	Hippocampus_comes
ENSONIG00000007282	-	92	67.052	ENSIPUG00000021966	rbfox3b	94	75.889	Ictalurus_punctatus
ENSONIG00000007282	-	98	80.236	ENSIPUG00000012010	rbfox3a	98	81.818	Ictalurus_punctatus
ENSONIG00000007282	-	87	67.442	ENSSTOG00000026817	RBFOX3	100	66.250	Ictidomys_tridecemlineatus
ENSONIG00000007282	-	87	69.253	ENSJJAG00000014167	Rbfox3	100	70.799	Jaculus_jaculus
ENSONIG00000007282	-	99	80.531	ENSKMAG00000006726	rbfox3b	92	79.646	Kryptolebias_marmoratus
ENSONIG00000007282	-	95	83.385	ENSLBEG00000004030	rbfox3b	99	78.344	Labrus_bergylta
ENSONIG00000007282	-	98	89.851	ENSLBEG00000022508	-	89	91.692	Labrus_bergylta
ENSONIG00000007282	-	98	73.204	ENSLACG00000018409	-	92	73.204	Latimeria_chalumnae
ENSONIG00000007282	-	50	58.602	ENSLACG00000000021	-	95	58.602	Latimeria_chalumnae
ENSONIG00000007282	-	96	86.405	ENSLOCG00000012267	rbfox3a	99	86.405	Lepisosteus_oculatus
ENSONIG00000007282	-	97	75.346	ENSLAFG00000016623	RBFOX3	96	71.547	Loxodonta_africana
ENSONIG00000007282	-	87	70.115	ENSMFAG00000002247	RBFOX3	100	70.799	Macaca_fascicularis
ENSONIG00000007282	-	87	82.060	ENSMMUG00000023028	RBFOX3	100	81.329	Macaca_mulatta
ENSONIG00000007282	-	87	81.728	ENSMNEG00000041147	RBFOX3	100	81.013	Macaca_nemestrina
ENSONIG00000007282	-	87	82.060	ENSMLEG00000025686	RBFOX3	100	81.329	Mandrillus_leucophaeus
ENSONIG00000007282	-	92	75.796	ENSMAMG00000019810	rbfox3b	99	74.841	Mastacembelus_armatus
ENSONIG00000007282	-	95	85.846	ENSMAMG00000020600	-	93	85.846	Mastacembelus_armatus
ENSONIG00000007282	-	99	80.826	ENSMZEG00005000781	rbfox3b	88	82.462	Maylandia_zebra
ENSONIG00000007282	-	91	78.994	ENSMZEG00005003055	-	81	78.994	Maylandia_zebra
ENSONIG00000007282	-	64	77.727	ENSMGAG00000005600	RBFOX3	96	71.373	Meleagris_gallopavo
ENSONIG00000007282	-	87	69.253	ENSMAUG00000013543	Rbfox3	100	69.697	Mesocricetus_auratus
ENSONIG00000007282	-	96	79.456	ENSMICG00000014898	RBFOX3	100	80.380	Microcebus_murinus
ENSONIG00000007282	-	87	70.977	ENSMOCG00000015373	Rbfox3	100	71.350	Microtus_ochrogaster
ENSONIG00000007282	-	99	79.179	ENSMMOG00000020193	rbfox3b	92	78.299	Mola_mola
ENSONIG00000007282	-	95	80.982	ENSMODG00000002089	RBFOX3	90	80.368	Monodelphis_domestica
ENSONIG00000007282	-	98	88.358	ENSMALG00000018270	-	96	85.079	Monopterus_albus
ENSONIG00000007282	-	99	80.531	ENSMALG00000020407	rbfox3b	92	79.646	Monopterus_albus
ENSONIG00000007282	-	87	81.395	MGP_CAROLIEiJ_G0017487	Rbfox3	96	88.489	Mus_caroli
ENSONIG00000007282	-	87	81.063	ENSMUSG00000025576	Rbfox3	96	88.489	Mus_musculus
ENSONIG00000007282	-	87	79.139	MGP_PahariEiJ_G0018614	Rbfox3	96	89.209	Mus_pahari
ENSONIG00000007282	-	87	81.728	MGP_SPRETEiJ_G0018331	Rbfox3	96	88.489	Mus_spretus
ENSONIG00000007282	-	99	72.800	ENSMPUG00000012319	RBFOX3	97	73.333	Mustela_putorius_furo
ENSONIG00000007282	-	87	71.264	ENSNGAG00000018006	Rbfox3	100	71.625	Nannospalax_galili
ENSONIG00000007282	-	100	86.006	ENSNBRG00000022885	-	91	86.006	Neolamprologus_brichardi
ENSONIG00000007282	-	99	79.941	ENSNBRG00000010102	rbfox3b	92	79.056	Neolamprologus_brichardi
ENSONIG00000007282	-	60	92.857	ENSNLEG00000000153	-	82	92.857	Nomascus_leucogenys
ENSONIG00000007282	-	87	50.144	ENSMEUG00000004218	-	100	51.381	Notamacropus_eugenii
ENSONIG00000007282	-	73	83.607	ENSOPRG00000016279	-	71	85.246	Ochotona_princeps
ENSONIG00000007282	-	87	82.060	ENSODEG00000009433	RBFOX3	100	81.962	Octodon_degus
ENSONIG00000007282	-	77	61.386	ENSOCUG00000014217	RBFOX3	82	60.333	Oryctolagus_cuniculus
ENSONIG00000007282	-	99	80.826	ENSORLG00000000905	rbfox3b	70	81.846	Oryzias_latipes
ENSONIG00000007282	-	99	80.826	ENSORLG00020018030	rbfox3b	99	72.121	Oryzias_latipes_hni
ENSONIG00000007282	-	99	80.531	ENSORLG00015009200	rbfox3b	99	72.930	Oryzias_latipes_hsok
ENSONIG00000007282	-	77	74.823	ENSOMEG00000014677	rbfox3b	77	74.237	Oryzias_melastigma
ENSONIG00000007282	-	94	80.061	ENSOGAG00000029595	RBFOX3	86	79.448	Otolemur_garnettii
ENSONIG00000007282	-	95	62.079	ENSOARG00000002908	RBFOX3	90	60.224	Ovis_aries
ENSONIG00000007282	-	74	81.176	ENSPPAG00000025383	RBFOX3	95	81.522	Pan_paniscus
ENSONIG00000007282	-	87	68.915	ENSPPRG00000007819	RBFOX3	100	71.148	Panthera_pardus
ENSONIG00000007282	-	87	82.060	ENSPTRG00000009727	RBFOX3	100	81.329	Pan_troglodytes
ENSONIG00000007282	-	87	82.060	ENSPANG00000019837	RBFOX3	100	81.329	Papio_anubis
ENSONIG00000007282	-	95	67.890	ENSPKIG00000022633	-	88	68.196	Paramormyrops_kingsleyae
ENSONIG00000007282	-	98	84.226	ENSPKIG00000010299	rbfox3a	89	82.848	Paramormyrops_kingsleyae
ENSONIG00000007282	-	81	80.144	ENSPMGG00000008000	rbfox3b	87	80.851	Periophthalmus_magnuspinnatus
ENSONIG00000007282	-	87	70.690	ENSPEMG00000010500	Rbfox3	100	71.074	Peromyscus_maniculatus_bairdii
ENSONIG00000007282	-	51	74.737	ENSPMAG00000008689	rbfox3b	93	76.842	Petromyzon_marinus
ENSONIG00000007282	-	99	67.876	ENSPCIG00000005766	RBFOX3	100	71.429	Phascolarctos_cinereus
ENSONIG00000007282	-	99	80.531	ENSPFOG00000018294	rbfox3b	88	79.646	Poecilia_formosa
ENSONIG00000007282	-	71	83.673	ENSPLAG00000000481	rbfox3b	75	82.449	Poecilia_latipinna
ENSONIG00000007282	-	92	73.885	ENSPMEG00000022997	rbfox3b	100	72.930	Poecilia_mexicana
ENSONIG00000007282	-	99	80.588	ENSPREG00000012886	rbfox3b	95	81.325	Poecilia_reticulata
ENSONIG00000007282	-	81	73.929	ENSPPYG00000008704	RBFOX3	84	74.476	Pongo_abelii
ENSONIG00000007282	-	87	67.919	ENSPCAG00000001401	RBFOX3	100	70.083	Procavia_capensis
ENSONIG00000007282	-	92	69.697	ENSPCOG00000012689	RBFOX3	100	69.972	Propithecus_coquereli
ENSONIG00000007282	-	87	59.483	ENSPVAG00000015243	RBFOX3	100	63.636	Pteropus_vampyrus
ENSONIG00000007282	-	98	90.149	ENSPNYG00000009079	-	86	90.149	Pundamilia_nyererei
ENSONIG00000007282	-	95	72.000	ENSPNYG00000010414	rbfox3b	87	72.000	Pundamilia_nyererei
ENSONIG00000007282	-	98	82.301	ENSPNAG00000002889	rbfox3a	90	82.596	Pygocentrus_nattereri
ENSONIG00000007282	-	92	66.879	ENSPNAG00000018173	rbfox3b	90	65.605	Pygocentrus_nattereri
ENSONIG00000007282	-	87	79.139	ENSRNOG00000003386	Rbfox3	100	81.388	Rattus_norvegicus
ENSONIG00000007282	-	94	81.288	ENSRBIG00000040449	RBFOX3	90	80.675	Rhinopithecus_bieti
ENSONIG00000007282	-	87	82.060	ENSRROG00000000766	RBFOX3	100	81.329	Rhinopithecus_roxellana
ENSONIG00000007282	-	87	80.731	ENSSBOG00000031591	RBFOX3	100	80.063	Saimiri_boliviensis_boliviensis
ENSONIG00000007282	-	98	75.410	ENSSHAG00000016076	RBFOX3	100	71.429	Sarcophilus_harrisii
ENSONIG00000007282	-	98	85.714	ENSSFOG00015023260	rbfox3a	91	85.714	Scleropages_formosus
ENSONIG00000007282	-	95	69.184	ENSSFOG00015004716	RBFOX3	92	72.171	Scleropages_formosus
ENSONIG00000007282	-	95	87.077	ENSSMAG00000019052	-	100	87.261	Scophthalmus_maximus
ENSONIG00000007282	-	99	76.124	ENSSMAG00000012618	rbfox3b	80	75.843	Scophthalmus_maximus
ENSONIG00000007282	-	92	74.204	ENSSDUG00000023183	rbfox3b	100	73.248	Seriola_dumerili
ENSONIG00000007282	-	98	82.090	ENSSDUG00000015801	-	93	80.588	Seriola_dumerili
ENSONIG00000007282	-	99	80.826	ENSSLDG00000000149	rbfox3b	92	79.941	Seriola_lalandi_dorsalis
ENSONIG00000007282	-	98	85.373	ENSSLDG00000016098	-	90	87.385	Seriola_lalandi_dorsalis
ENSONIG00000007282	-	87	81.063	ENSSPUG00000011733	RBFOX3	99	81.646	Sphenodon_punctatus
ENSONIG00000007282	-	95	74.154	ENSSPAG00000017571	rbfox3b	87	73.231	Stegastes_partitus
ENSONIG00000007282	-	79	84.191	ENSSPAG00000004898	-	85	84.321	Stegastes_partitus
ENSONIG00000007282	-	79	84.926	ENSSSCG00000039498	RBFOX3	96	72.414	Sus_scrofa
ENSONIG00000007282	-	97	76.540	ENSTRUG00000004894	rbfox3b	95	76.540	Takifugu_rubripes
ENSONIG00000007282	-	98	74.451	ENSTNIG00000011278	rbfox3b	91	73.626	Tetraodon_nigroviridis
ENSONIG00000007282	-	55	59.746	ENSTBEG00000004296	-	86	50.625	Tupaia_belangeri
ENSONIG00000007282	-	87	64.265	ENSTTRG00000003676	RBFOX3	100	65.193	Tursiops_truncatus
ENSONIG00000007282	-	87	81.395	ENSUAMG00000004668	RBFOX3	100	80.696	Ursus_americanus
ENSONIG00000007282	-	95	81.346	ENSVVUG00000017864	RBFOX3	100	81.013	Vulpes_vulpes
ENSONIG00000007282	-	99	65.193	ENSXETG00000020236	rbfox3	90	65.746	Xenopus_tropicalis
ENSONIG00000007282	-	99	80.000	ENSXCOG00000018262	rbfox3b	100	77.636	Xiphophorus_couchianus
ENSONIG00000007282	-	99	80.826	ENSXMAG00000012939	rbfox3b	92	79.941	Xiphophorus_maculatus