EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000007474 (Gene tree)
Gene ID: 100706393
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3928 bases
Position: chrGL831201.1:382271-386198
Accession: 100706393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009422	RtcB	PF01139.17	1.2e-146	1	1
ENSONIP00000009423	RtcB	PF01139.17	9.4e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009429	-	1883	-	ENSONIP00000009423	504 (aa)	-	I3JKM9
ENSONIT00000009428	-	1518	-	ENSONIP00000009422	505 (aa)	XP_003448790	I3JKM8

Gene Model

Click here to download ENSONIG00000007474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007474	rtcb	100	94.455	ENSG00000100220	RTCB	100	94.455	Homo_sapiens
ENSONIG00000007474	rtcb	100	97.228	ENSAPOG00000006040	rtcb	100	97.228	Acanthochromis_polyacanthus
ENSONIG00000007474	rtcb	100	94.455	ENSAMEG00000016152	RTCB	100	94.455	Ailuropoda_melanoleuca
ENSONIG00000007474	rtcb	100	92.277	ENSACIG00000009083	rtcb	100	92.277	Amphilophus_citrinellus
ENSONIG00000007474	rtcb	100	97.228	ENSAOCG00000005662	rtcb	100	98.261	Amphiprion_ocellaris
ENSONIG00000007474	rtcb	96	92.402	ENSAPEG00000024653	rtcb	100	92.402	Amphiprion_percula
ENSONIG00000007474	rtcb	100	97.228	ENSAPEG00000024701	rtcb	100	97.228	Amphiprion_percula
ENSONIG00000007474	rtcb	100	96.634	ENSATEG00000000618	rtcb	100	96.634	Anabas_testudineus
ENSONIG00000007474	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSONIG00000007474	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSONIG00000007474	rtcb	100	80.198	ENSANAG00000018191	-	91	80.198	Aotus_nancymaae
ENSONIG00000007474	rtcb	100	98.218	ENSACLG00000008367	rtcb	100	98.478	Astatotilapia_calliptera
ENSONIG00000007474	rtcb	100	95.644	ENSAMXG00000042320	rtcb	100	95.644	Astyanax_mexicanus
ENSONIG00000007474	rtcb	100	94.257	ENSBTAG00000011070	RTCB	100	94.257	Bos_taurus
ENSONIG00000007474	rtcb	100	74.257	WBGene00008877	rtcb-1	100	74.257	Caenorhabditis_elegans
ENSONIG00000007474	rtcb	100	94.257	ENSCJAG00000006128	RTCB	100	94.257	Callithrix_jacchus
ENSONIG00000007474	rtcb	100	90.297	ENSCAFG00000010789	-	100	90.297	Canis_familiaris
ENSONIG00000007474	rtcb	100	94.455	ENSCAFG00000001785	RTCB	100	94.455	Canis_familiaris
ENSONIG00000007474	rtcb	100	94.455	ENSCAFG00020004890	-	100	94.455	Canis_lupus_dingo
ENSONIG00000007474	rtcb	87	90.455	ENSCAFG00020018953	-	99	90.455	Canis_lupus_dingo
ENSONIG00000007474	rtcb	100	94.455	ENSCHIG00000027009	-	100	94.455	Capra_hircus
ENSONIG00000007474	rtcb	100	94.257	ENSTSYG00000012320	RTCB	100	94.257	Carlito_syrichta
ENSONIG00000007474	rtcb	94	94.340	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSONIG00000007474	rtcb	100	94.257	ENSCCAG00000000618	RTCB	100	94.257	Cebus_capucinus
ENSONIG00000007474	rtcb	100	94.059	ENSCATG00000033424	RTCB	100	94.059	Cercocebus_atys
ENSONIG00000007474	rtcb	100	93.861	ENSCLAG00000007997	RTCB	100	93.861	Chinchilla_lanigera
ENSONIG00000007474	rtcb	100	93.861	ENSCSAG00000008351	RTCB	100	93.861	Chlorocebus_sabaeus
ENSONIG00000007474	rtcb	100	80.594	ENSCHOG00000009123	RTCB	100	80.594	Choloepus_hoffmanni
ENSONIG00000007474	rtcb	100	94.059	ENSCPBG00000023184	RTCB	100	94.059	Chrysemys_picta_bellii
ENSONIG00000007474	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSONIG00000007474	rtcb	100	82.970	ENSCSAVG00000008124	-	99	82.970	Ciona_savignyi
ENSONIG00000007474	rtcb	100	90.495	ENSCANG00000001891	RTCB	98	92.842	Colobus_angolensis_palliatus
ENSONIG00000007474	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSONIG00000007474	rtcb	99	89.463	ENSCGRG00000009587	-	99	89.463	Cricetulus_griseus_crigri
ENSONIG00000007474	rtcb	100	95.446	ENSCSEG00000003986	rtcb	100	95.446	Cynoglossus_semilaevis
ENSONIG00000007474	rtcb	87	92.534	ENSCVAG00000000569	rtcb	100	92.534	Cyprinodon_variegatus
ENSONIG00000007474	rtcb	100	96.040	ENSDARG00000101047	rtcb	100	96.040	Danio_rerio
ENSONIG00000007474	rtcb	80	90.418	ENSDNOG00000012425	RTCB	99	90.418	Dasypus_novemcinctus
ENSONIG00000007474	rtcb	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSONIG00000007474	rtcb	99	84.692	FBgn0032781	RtcB	99	84.692	Drosophila_melanogaster
ENSONIG00000007474	rtcb	100	88.119	ENSETEG00000001988	RTCB	100	88.119	Echinops_telfairi
ENSONIG00000007474	rtcb	100	85.941	ENSEBUG00000014235	rtcb	100	85.941	Eptatretus_burgeri
ENSONIG00000007474	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSONIG00000007474	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSONIG00000007474	rtcb	89	85.906	ENSEEUG00000006251	RTCB	100	85.906	Erinaceus_europaeus
ENSONIG00000007474	rtcb	100	83.554	ENSELUG00000009275	rtcb	100	83.554	Esox_lucius
ENSONIG00000007474	rtcb	100	94.455	ENSFCAG00000026480	RTCB	100	94.455	Felis_catus
ENSONIG00000007474	rtcb	100	94.653	ENSFALG00000013334	RTCB	100	94.653	Ficedula_albicollis
ENSONIG00000007474	rtcb	100	94.257	ENSFDAG00000018150	RTCB	100	94.257	Fukomys_damarensis
ENSONIG00000007474	rtcb	100	96.634	ENSFHEG00000009595	rtcb	100	96.634	Fundulus_heteroclitus
ENSONIG00000007474	rtcb	100	93.069	ENSGMOG00000018882	rtcb	100	93.069	Gadus_morhua
ENSONIG00000007474	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSONIG00000007474	rtcb	100	96.832	ENSGAFG00000004198	rtcb	100	96.832	Gambusia_affinis
ENSONIG00000007474	rtcb	100	95.446	ENSGACG00000000586	rtcb	100	95.446	Gasterosteus_aculeatus
ENSONIG00000007474	rtcb	97	91.376	ENSGAGG00000019133	RTCB	98	93.830	Gopherus_agassizii
ENSONIG00000007474	rtcb	100	94.455	ENSGGOG00000011402	RTCB	100	94.455	Gorilla_gorilla
ENSONIG00000007474	rtcb	100	98.218	ENSHBUG00000020571	rtcb	100	98.218	Haplochromis_burtoni
ENSONIG00000007474	rtcb	100	94.257	ENSHGLG00000004492	RTCB	100	94.257	Heterocephalus_glaber_female
ENSONIG00000007474	rtcb	93	67.585	ENSHGLG00000001066	-	99	67.585	Heterocephalus_glaber_female
ENSONIG00000007474	rtcb	100	94.257	ENSHGLG00100008965	RTCB	100	94.257	Heterocephalus_glaber_male
ENSONIG00000007474	rtcb	100	93.886	ENSHCOG00000006450	rtcb	100	93.886	Hippocampus_comes
ENSONIG00000007474	rtcb	100	95.446	ENSIPUG00000015443	rtcb	100	95.446	Ictalurus_punctatus
ENSONIG00000007474	rtcb	100	94.059	ENSSTOG00000003878	RTCB	100	94.059	Ictidomys_tridecemlineatus
ENSONIG00000007474	rtcb	100	94.455	ENSJJAG00000010667	Rtcb	100	94.455	Jaculus_jaculus
ENSONIG00000007474	rtcb	100	95.842	ENSKMAG00000013178	rtcb	100	95.842	Kryptolebias_marmoratus
ENSONIG00000007474	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSONIG00000007474	rtcb	100	95.248	ENSLBEG00000000214	rtcb	100	95.248	Labrus_bergylta
ENSONIG00000007474	rtcb	100	94.059	ENSLACG00000013033	RTCB	100	94.059	Latimeria_chalumnae
ENSONIG00000007474	rtcb	100	95.446	ENSLOCG00000016515	rtcb	99	95.446	Lepisosteus_oculatus
ENSONIG00000007474	rtcb	100	93.861	ENSLAFG00000002082	RTCB	100	93.861	Loxodonta_africana
ENSONIG00000007474	rtcb	100	93.861	ENSMFAG00000034419	RTCB	100	93.861	Macaca_fascicularis
ENSONIG00000007474	rtcb	100	93.861	ENSMMUG00000006720	RTCB	100	93.861	Macaca_mulatta
ENSONIG00000007474	rtcb	100	93.861	ENSMNEG00000040669	RTCB	100	93.861	Macaca_nemestrina
ENSONIG00000007474	rtcb	100	94.059	ENSMLEG00000040505	RTCB	100	94.059	Mandrillus_leucophaeus
ENSONIG00000007474	rtcb	100	96.436	ENSMAMG00000020676	rtcb	100	96.436	Mastacembelus_armatus
ENSONIG00000007474	rtcb	100	98.218	ENSMZEG00005018942	rtcb	100	98.218	Maylandia_zebra
ENSONIG00000007474	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSONIG00000007474	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSONIG00000007474	rtcb	100	75.050	ENSMICG00000036677	-	100	75.050	Microcebus_murinus
ENSONIG00000007474	rtcb	100	94.257	ENSMICG00000013303	-	100	94.257	Microcebus_murinus
ENSONIG00000007474	rtcb	100	94.851	ENSMOCG00000002440	Rtcb	100	94.851	Microtus_ochrogaster
ENSONIG00000007474	rtcb	100	96.634	ENSMMOG00000005987	rtcb	100	96.634	Mola_mola
ENSONIG00000007474	rtcb	100	94.455	ENSMODG00000001414	RTCB	100	94.455	Monodelphis_domestica
ENSONIG00000007474	rtcb	100	95.842	ENSMALG00000007603	rtcb	100	95.842	Monopterus_albus
ENSONIG00000007474	rtcb	100	94.455	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.455	Mus_caroli
ENSONIG00000007474	rtcb	100	94.455	ENSMUSG00000001783	Rtcb	100	94.455	Mus_musculus
ENSONIG00000007474	rtcb	100	94.455	MGP_PahariEiJ_G0031396	Rtcb	100	94.455	Mus_pahari
ENSONIG00000007474	rtcb	100	94.455	MGP_SPRETEiJ_G0016507	Rtcb	100	94.455	Mus_spretus
ENSONIG00000007474	rtcb	100	94.455	ENSMPUG00000012285	RTCB	100	94.455	Mustela_putorius_furo
ENSONIG00000007474	rtcb	100	91.519	ENSMLUG00000007803	RTCB	100	91.519	Myotis_lucifugus
ENSONIG00000007474	rtcb	68	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSONIG00000007474	rtcb	100	98.416	ENSNBRG00000017202	rtcb	100	98.416	Neolamprologus_brichardi
ENSONIG00000007474	rtcb	100	94.455	ENSNLEG00000004960	RTCB	100	94.455	Nomascus_leucogenys
ENSONIG00000007474	rtcb	100	70.891	ENSMEUG00000007809	-	100	70.891	Notamacropus_eugenii
ENSONIG00000007474	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSONIG00000007474	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSONIG00000007474	rtcb	100	62.574	ENSODEG00000005042	-	100	62.574	Octodon_degus
ENSONIG00000007474	rtcb	100	94.059	ENSOANG00000005524	RTCB	100	94.059	Ornithorhynchus_anatinus
ENSONIG00000007474	rtcb	94	93.869	ENSOCUG00000008270	RTCB	97	93.869	Oryctolagus_cuniculus
ENSONIG00000007474	rtcb	100	97.030	ENSORLG00000020093	rtcb	100	97.030	Oryzias_latipes
ENSONIG00000007474	rtcb	100	96.634	ENSORLG00020003706	rtcb	100	96.634	Oryzias_latipes_hni
ENSONIG00000007474	rtcb	100	96.832	ENSORLG00015002968	rtcb	100	96.832	Oryzias_latipes_hsok
ENSONIG00000007474	rtcb	100	96.238	ENSOMEG00000021278	rtcb	100	96.238	Oryzias_melastigma
ENSONIG00000007474	rtcb	100	93.663	ENSOGAG00000001425	RTCB	100	93.663	Otolemur_garnettii
ENSONIG00000007474	rtcb	100	94.455	ENSOARG00000018008	RTCB	100	94.455	Ovis_aries
ENSONIG00000007474	rtcb	100	94.455	ENSPPAG00000028667	RTCB	100	94.455	Pan_paniscus
ENSONIG00000007474	rtcb	100	94.455	ENSPPRG00000004038	RTCB	100	94.455	Panthera_pardus
ENSONIG00000007474	rtcb	94	90.316	ENSPTIG00000020499	RTCB	97	91.368	Panthera_tigris_altaica
ENSONIG00000007474	rtcb	100	94.455	ENSPTRG00000014287	RTCB	100	94.455	Pan_troglodytes
ENSONIG00000007474	rtcb	100	93.861	ENSPANG00000016035	RTCB	100	93.861	Papio_anubis
ENSONIG00000007474	rtcb	100	95.050	ENSPKIG00000001881	rtcb	100	95.050	Paramormyrops_kingsleyae
ENSONIG00000007474	rtcb	91	94.565	ENSPSIG00000011690	RTCB	100	94.565	Pelodiscus_sinensis
ENSONIG00000007474	rtcb	100	95.644	ENSPMGG00000016672	rtcb	100	95.644	Periophthalmus_magnuspinnatus
ENSONIG00000007474	rtcb	100	94.455	ENSPEMG00000019548	Rtcb	100	94.455	Peromyscus_maniculatus_bairdii
ENSONIG00000007474	rtcb	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSONIG00000007474	rtcb	100	94.455	ENSPCIG00000009467	RTCB	100	94.455	Phascolarctos_cinereus
ENSONIG00000007474	rtcb	100	97.228	ENSPFOG00000003058	rtcb	100	97.228	Poecilia_formosa
ENSONIG00000007474	rtcb	100	97.030	ENSPLAG00000017663	rtcb	100	97.030	Poecilia_latipinna
ENSONIG00000007474	rtcb	100	97.228	ENSPMEG00000006227	rtcb	100	97.228	Poecilia_mexicana
ENSONIG00000007474	rtcb	100	96.832	ENSPREG00000018467	rtcb	100	96.832	Poecilia_reticulata
ENSONIG00000007474	rtcb	100	94.455	ENSPPYG00000011752	RTCB	100	94.455	Pongo_abelii
ENSONIG00000007474	rtcb	93	77.754	ENSPCAG00000013641	RTCB	100	77.754	Procavia_capensis
ENSONIG00000007474	rtcb	100	94.059	ENSPCOG00000017243	RTCB	100	94.059	Propithecus_coquereli
ENSONIG00000007474	rtcb	93	93.617	ENSPVAG00000002380	RTCB	100	93.617	Pteropus_vampyrus
ENSONIG00000007474	rtcb	100	98.218	ENSPNYG00000022760	rtcb	100	98.218	Pundamilia_nyererei
ENSONIG00000007474	rtcb	100	96.040	ENSPNAG00000009209	rtcb	100	96.040	Pygocentrus_nattereri
ENSONIG00000007474	rtcb	100	94.455	ENSRNOG00000004813	Rtcb	100	94.455	Rattus_norvegicus
ENSONIG00000007474	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSONIG00000007474	rtcb	100	89.505	ENSSBOG00000020085	-	100	89.505	Saimiri_boliviensis_boliviensis
ENSONIG00000007474	rtcb	94	95.148	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSONIG00000007474	rtcb	100	95.842	ENSSFOG00015000763	rtcb	100	95.842	Scleropages_formosus
ENSONIG00000007474	rtcb	100	94.257	ENSSFOG00015011572	RTCB	100	94.257	Scleropages_formosus
ENSONIG00000007474	rtcb	100	92.673	ENSSMAG00000005096	rtcb	100	92.673	Scophthalmus_maximus
ENSONIG00000007474	rtcb	100	95.050	ENSSDUG00000012605	rtcb	100	95.050	Seriola_dumerili
ENSONIG00000007474	rtcb	100	95.050	ENSSLDG00000019458	rtcb	100	95.050	Seriola_lalandi_dorsalis
ENSONIG00000007474	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSONIG00000007474	rtcb	100	93.465	ENSSPUG00000012814	RTCB	100	93.465	Sphenodon_punctatus
ENSONIG00000007474	rtcb	100	97.228	ENSSPAG00000004623	rtcb	100	97.228	Stegastes_partitus
ENSONIG00000007474	rtcb	100	94.455	ENSSSCG00000000158	RTCB	100	94.455	Sus_scrofa
ENSONIG00000007474	rtcb	100	94.653	ENSTGUG00000010947	RTCB	99	94.653	Taeniopygia_guttata
ENSONIG00000007474	rtcb	91	98.043	ENSTRUG00000009880	rtcb	100	98.043	Takifugu_rubripes
ENSONIG00000007474	rtcb	100	95.842	ENSTNIG00000002484	rtcb	100	95.842	Tetraodon_nigroviridis
ENSONIG00000007474	rtcb	100	81.386	ENSTBEG00000004418	RTCB	100	81.386	Tupaia_belangeri
ENSONIG00000007474	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSONIG00000007474	rtcb	100	94.455	ENSUAMG00000022792	RTCB	100	94.455	Ursus_americanus
ENSONIG00000007474	rtcb	100	94.455	ENSUMAG00000017225	RTCB	100	94.455	Ursus_maritimus
ENSONIG00000007474	rtcb	100	94.257	ENSVPAG00000005375	RTCB	100	94.257	Vicugna_pacos
ENSONIG00000007474	rtcb	100	94.455	ENSVVUG00000023408	RTCB	100	95.086	Vulpes_vulpes
ENSONIG00000007474	rtcb	100	93.267	ENSXETG00000011523	rtcb	100	93.267	Xenopus_tropicalis
ENSONIG00000007474	rtcb	100	96.832	ENSXMAG00000002855	rtcb	100	96.832	Xiphophorus_maculatus