EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000007645 (Gene tree)
Gene ID: 100711210
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2982 bases
Position: chrGL831201.1:1825417-1828398
Accession: 100711210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009634	Mitoc_L55	PF09776.9	8.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009640	-	1916	-	ENSONIP00000009634	135 (aa)	XP_003448808	I3JL90

Gene Model

Click here to download ENSONIG00000007645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007645	zgc:171480	100	63.889	ENSAPOG00000002881	zgc:171480	100	63.889	Acanthochromis_polyacanthus
ENSONIG00000007645	zgc:171480	100	82.963	ENSACIG00000001646	zgc:171480	97	82.963	Amphilophus_citrinellus
ENSONIG00000007645	zgc:171480	100	66.667	ENSAOCG00000016155	zgc:171480	100	66.667	Amphiprion_ocellaris
ENSONIG00000007645	zgc:171480	100	66.667	ENSAPEG00000022327	zgc:171480	100	66.667	Amphiprion_percula
ENSONIG00000007645	zgc:171480	99	62.937	ENSATEG00000005625	zgc:171480	97	62.937	Anabas_testudineus
ENSONIG00000007645	zgc:171480	88	52.500	ENSACAG00000006897	-	90	52.500	Anolis_carolinensis
ENSONIG00000007645	zgc:171480	100	95.556	ENSACLG00000005172	zgc:171480	98	95.556	Astatotilapia_calliptera
ENSONIG00000007645	zgc:171480	76	63.725	ENSAMXG00000043839	zgc:171480	78	63.725	Astyanax_mexicanus
ENSONIG00000007645	zgc:171480	74	57.426	ENSCPBG00000001771	-	80	57.426	Chrysemys_picta_bellii
ENSONIG00000007645	zgc:171480	100	52.482	ENSCSEG00000019533	zgc:171480	97	52.482	Cynoglossus_semilaevis
ENSONIG00000007645	zgc:171480	87	55.085	ENSDARG00000043402	zgc:171480	87	55.085	Danio_rerio
ENSONIG00000007645	zgc:171480	76	57.282	ENSELUG00000007716	zgc:171480	79	57.282	Esox_lucius
ENSONIG00000007645	zgc:171480	67	48.352	ENSFALG00000001083	-	94	48.352	Ficedula_albicollis
ENSONIG00000007645	zgc:171480	76	69.903	ENSFHEG00000000203	zgc:171480	76	68.571	Fundulus_heteroclitus
ENSONIG00000007645	zgc:171480	75	70.297	ENSGMOG00000019009	zgc:171480	99	70.297	Gadus_morhua
ENSONIG00000007645	zgc:171480	76	45.631	ENSGALG00000038820	-	90	47.619	Gallus_gallus
ENSONIG00000007645	zgc:171480	91	60.156	ENSGAFG00000004832	-	89	60.156	Gambusia_affinis
ENSONIG00000007645	zgc:171480	68	77.174	ENSGACG00000002136	zgc:171480	100	77.174	Gasterosteus_aculeatus
ENSONIG00000007645	zgc:171480	74	53.000	ENSGAGG00000001806	-	81	53.000	Gopherus_agassizii
ENSONIG00000007645	zgc:171480	100	95.556	ENSHBUG00000007895	zgc:171480	98	95.556	Haplochromis_burtoni
ENSONIG00000007645	zgc:171480	99	61.940	ENSHCOG00000003526	zgc:171480	71	61.940	Hippocampus_comes
ENSONIG00000007645	zgc:171480	73	62.000	ENSIPUG00000001273	mrpl55	76	62.000	Ictalurus_punctatus
ENSONIG00000007645	zgc:171480	91	61.111	ENSKMAG00000002011	zgc:171480	99	61.111	Kryptolebias_marmoratus
ENSONIG00000007645	zgc:171480	100	67.407	ENSLBEG00000010915	zgc:171480	100	67.407	Labrus_bergylta
ENSONIG00000007645	zgc:171480	100	67.407	ENSLBEG00000016107	-	100	67.407	Labrus_bergylta
ENSONIG00000007645	zgc:171480	74	58.416	ENSLACG00000016281	zgc:171480	77	58.416	Latimeria_chalumnae
ENSONIG00000007645	zgc:171480	100	61.905	ENSMAMG00000022250	zgc:171480	98	61.905	Mastacembelus_armatus
ENSONIG00000007645	zgc:171480	100	94.815	ENSMZEG00005015585	zgc:171480	98	94.815	Maylandia_zebra
ENSONIG00000007645	zgc:171480	76	47.619	ENSMGAG00000002612	-	90	47.619	Meleagris_gallopavo
ENSONIG00000007645	zgc:171480	84	49.123	ENSMMOG00000008740	-	87	49.123	Mola_mola
ENSONIG00000007645	zgc:171480	79	70.093	ENSMALG00000019823	zgc:171480	85	70.093	Monopterus_albus
ENSONIG00000007645	zgc:171480	100	94.815	ENSNBRG00000019447	zgc:171480	98	94.815	Neolamprologus_brichardi
ENSONIG00000007645	zgc:171480	77	64.423	ENSORLG00020006963	zgc:171480	78	64.423	Oryzias_latipes_hni
ENSONIG00000007645	zgc:171480	77	65.385	ENSORLG00015003266	zgc:171480	78	65.385	Oryzias_latipes_hsok
ENSONIG00000007645	zgc:171480	77	66.346	ENSOMEG00000008184	zgc:171480	76	66.346	Oryzias_melastigma
ENSONIG00000007645	zgc:171480	73	61.616	ENSPKIG00000006753	zgc:171480	77	61.616	Paramormyrops_kingsleyae
ENSONIG00000007645	zgc:171480	74	54.000	ENSPSIG00000010893	-	80	54.000	Pelodiscus_sinensis
ENSONIG00000007645	zgc:171480	78	62.264	ENSPMGG00000012657	-	82	62.264	Periophthalmus_magnuspinnatus
ENSONIG00000007645	zgc:171480	69	47.368	ENSPMAG00000000867	zgc:171480	89	45.192	Petromyzon_marinus
ENSONIG00000007645	zgc:171480	73	54.808	ENSPCIG00000021848	-	79	54.808	Phascolarctos_cinereus
ENSONIG00000007645	zgc:171480	90	59.843	ENSPFOG00000012703	zgc:171480	91	59.843	Poecilia_formosa
ENSONIG00000007645	zgc:171480	90	60.630	ENSPREG00000020328	zgc:171480	91	60.630	Poecilia_reticulata
ENSONIG00000007645	zgc:171480	73	62.000	ENSPNAG00000017309	zgc:171480	76	62.000	Pygocentrus_nattereri
ENSONIG00000007645	zgc:171480	99	52.206	ENSSFOG00015015668	mrpl55	100	52.206	Scleropages_formosus
ENSONIG00000007645	zgc:171480	100	64.493	ENSSMAG00000005429	zgc:171480	97	64.493	Scophthalmus_maximus
ENSONIG00000007645	zgc:171480	100	61.268	ENSSDUG00000022556	zgc:171480	95	61.268	Seriola_dumerili
ENSONIG00000007645	zgc:171480	100	60.563	ENSSLDG00000019598	zgc:171480	95	60.563	Seriola_lalandi_dorsalis
ENSONIG00000007645	zgc:171480	76	49.515	ENSSPUG00000000735	-	82	49.515	Sphenodon_punctatus
ENSONIG00000007645	zgc:171480	100	65.278	ENSSPAG00000011598	zgc:171480	100	65.278	Stegastes_partitus
ENSONIG00000007645	zgc:171480	75	70.297	ENSTRUG00000003082	zgc:171480	71	70.297	Takifugu_rubripes
ENSONIG00000007645	zgc:171480	69	73.118	ENSXCOG00000005887	zgc:171480	76	73.118	Xiphophorus_couchianus
ENSONIG00000007645	zgc:171480	90	59.055	ENSXMAG00000007937	zgc:171480	91	59.055	Xiphophorus_maculatus