EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000007659 (Gene tree)
Gene ID: 100706394
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 11694 bases
Position: chrGL831201.1:1858485-1870178
Accession: 100706394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009653	ResIII	PF04851.15	5e-10	1	1
ENSONIP00000009654	ResIII	PF04851.15	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009659	-	3302	XM_003448825	ENSONIP00000009653	739 (aa)	XP_003448873	I3JLA9
ENSONIT00000009660	-	2241	-	ENSONIP00000009654	746 (aa)	-	I3JLB0

Gene Model

Click here to download ENSONIG00000007659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000007659	rad54l	89	43.615	ENSONIG00000006067	rad54b	74	43.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007659	rad54l	99	77.614	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSONIG00000007659	rad54l	99	86.122	ENSAPOG00000011643	rad54l	99	86.122	Acanthochromis_polyacanthus
ENSONIG00000007659	rad54l	99	76.644	ENSAMEG00000013902	RAD54L	99	76.644	Ailuropoda_melanoleuca
ENSONIG00000007659	rad54l	100	90.214	ENSACIG00000001939	rad54l	99	91.057	Amphilophus_citrinellus
ENSONIG00000007659	rad54l	99	89.266	ENSAOCG00000017576	rad54l	99	89.266	Amphiprion_ocellaris
ENSONIG00000007659	rad54l	96	89.170	ENSAPEG00000020658	rad54l	99	88.178	Amphiprion_percula
ENSONIG00000007659	rad54l	95	89.744	ENSATEG00000006767	rad54l	100	89.744	Anabas_testudineus
ENSONIG00000007659	rad54l	95	81.688	ENSAPLG00000006389	RAD54L	99	81.688	Anas_platyrhynchos
ENSONIG00000007659	rad54l	99	80.081	ENSACAG00000002312	RAD54L	99	80.081	Anolis_carolinensis
ENSONIG00000007659	rad54l	99	77.212	ENSANAG00000035439	RAD54L	99	77.346	Aotus_nancymaae
ENSONIG00000007659	rad54l	100	99.188	ENSACLG00000018711	rad54l	100	99.188	Astatotilapia_calliptera
ENSONIG00000007659	rad54l	100	83.827	ENSAMXG00000012777	rad54l	100	83.827	Astyanax_mexicanus
ENSONIG00000007659	rad54l	99	76.975	ENSBTAG00000019901	RAD54L	99	76.975	Bos_taurus
ENSONIG00000007659	rad54l	93	58.934	WBGene00004298	rad-54	84	58.934	Caenorhabditis_elegans
ENSONIG00000007659	rad54l	97	77.147	ENSCJAG00000021080	RAD54L	91	77.469	Callithrix_jacchus
ENSONIG00000007659	rad54l	99	77.078	ENSCAFG00000004272	RAD54L	99	77.078	Canis_familiaris
ENSONIG00000007659	rad54l	99	77.047	ENSCAFG00020015066	RAD54L	99	77.047	Canis_lupus_dingo
ENSONIG00000007659	rad54l	99	76.810	ENSCHIG00000020118	RAD54L	99	76.810	Capra_hircus
ENSONIG00000007659	rad54l	99	76.439	ENSTSYG00000002032	RAD54L	99	76.439	Carlito_syrichta
ENSONIG00000007659	rad54l	99	77.480	ENSCPOG00000006768	RAD54L	99	77.480	Cavia_porcellus
ENSONIG00000007659	rad54l	99	77.748	ENSCCAG00000025783	RAD54L	99	77.748	Cebus_capucinus
ENSONIG00000007659	rad54l	99	77.212	ENSCATG00000030589	RAD54L	99	77.212	Cercocebus_atys
ENSONIG00000007659	rad54l	99	77.346	ENSCLAG00000004645	RAD54L	99	77.346	Chinchilla_lanigera
ENSONIG00000007659	rad54l	99	77.346	ENSCSAG00000001229	RAD54L	99	77.346	Chlorocebus_sabaeus
ENSONIG00000007659	rad54l	99	79.677	ENSCPBG00000005675	RAD54L	99	79.677	Chrysemys_picta_bellii
ENSONIG00000007659	rad54l	99	62.257	ENSCING00000024456	-	99	62.127	Ciona_intestinalis
ENSONIG00000007659	rad54l	100	62.092	ENSCSAVG00000010859	-	100	62.222	Ciona_savignyi
ENSONIG00000007659	rad54l	99	77.078	ENSCANG00000034891	RAD54L	99	77.078	Colobus_angolensis_palliatus
ENSONIG00000007659	rad54l	99	76.644	ENSCGRG00001014807	Rad54l	99	76.644	Cricetulus_griseus_chok1gshd
ENSONIG00000007659	rad54l	99	76.644	ENSCGRG00000016038	Rad54l	99	76.644	Cricetulus_griseus_crigri
ENSONIG00000007659	rad54l	99	85.366	ENSCSEG00000001983	rad54l	99	85.366	Cynoglossus_semilaevis
ENSONIG00000007659	rad54l	81	84.211	ENSCVAG00000019561	rad54l	100	84.211	Cyprinodon_variegatus
ENSONIG00000007659	rad54l	100	82.815	ENSDARG00000018623	rad54l	100	82.815	Danio_rerio
ENSONIG00000007659	rad54l	99	76.542	ENSDNOG00000003395	RAD54L	99	76.542	Dasypus_novemcinctus
ENSONIG00000007659	rad54l	99	70.133	ENSDORG00000002632	Rad54l	99	70.133	Dipodomys_ordii
ENSONIG00000007659	rad54l	99	54.339	FBgn0002989	okr	95	54.339	Drosophila_melanogaster
ENSONIG00000007659	rad54l	78	76.035	ENSETEG00000000550	RAD54L	78	76.035	Echinops_telfairi
ENSONIG00000007659	rad54l	99	76.779	ENSEASG00005004511	RAD54L	98	78.686	Equus_asinus_asinus
ENSONIG00000007659	rad54l	99	76.944	ENSECAG00000008760	RAD54L	99	77.078	Equus_caballus
ENSONIG00000007659	rad54l	99	74.263	ENSEEUG00000008113	RAD54L	99	74.263	Erinaceus_europaeus
ENSONIG00000007659	rad54l	100	84.987	ENSELUG00000002295	rad54l	100	84.987	Esox_lucius
ENSONIG00000007659	rad54l	99	76.273	ENSFCAG00000003444	RAD54L	99	76.273	Felis_catus
ENSONIG00000007659	rad54l	99	79.139	ENSFALG00000009480	RAD54L	99	79.542	Ficedula_albicollis
ENSONIG00000007659	rad54l	99	77.212	ENSFDAG00000007806	RAD54L	99	77.212	Fukomys_damarensis
ENSONIG00000007659	rad54l	63	82.112	ENSFHEG00000009824	rad54l	80	82.112	Fundulus_heteroclitus
ENSONIG00000007659	rad54l	99	83.491	ENSGMOG00000014568	rad54l	100	83.491	Gadus_morhua
ENSONIG00000007659	rad54l	99	78.947	ENSGALG00000010356	RAD54L	92	78.947	Gallus_gallus
ENSONIG00000007659	rad54l	91	85.163	ENSGAFG00000011110	rad54l	100	85.163	Gambusia_affinis
ENSONIG00000007659	rad54l	100	87.179	ENSGACG00000003111	rad54l	98	87.179	Gasterosteus_aculeatus
ENSONIG00000007659	rad54l	99	78.976	ENSGAGG00000014089	RAD54L	96	78.976	Gopherus_agassizii
ENSONIG00000007659	rad54l	99	77.212	ENSGGOG00000010602	RAD54L	99	77.212	Gorilla_gorilla
ENSONIG00000007659	rad54l	100	99.188	ENSHBUG00000007793	rad54l	100	99.188	Haplochromis_burtoni
ENSONIG00000007659	rad54l	99	77.212	ENSHGLG00000000753	RAD54L	99	77.212	Heterocephalus_glaber_female
ENSONIG00000007659	rad54l	99	76.810	ENSHGLG00100016987	RAD54L	99	76.810	Heterocephalus_glaber_male
ENSONIG00000007659	rad54l	100	81.830	ENSIPUG00000015999	rad54l	100	84.648	Ictalurus_punctatus
ENSONIG00000007659	rad54l	99	76.872	ENSSTOG00000029125	RAD54L	99	76.872	Ictidomys_tridecemlineatus
ENSONIG00000007659	rad54l	99	63.673	ENSJJAG00000000235	-	99	63.539	Jaculus_jaculus
ENSONIG00000007659	rad54l	100	86.486	ENSKMAG00000009944	rad54l	100	86.486	Kryptolebias_marmoratus
ENSONIG00000007659	rad54l	99	88.179	ENSLBEG00000014617	rad54l	97	90.313	Labrus_bergylta
ENSONIG00000007659	rad54l	100	83.042	ENSLOCG00000004144	rad54l	100	84.250	Lepisosteus_oculatus
ENSONIG00000007659	rad54l	99	76.376	ENSLAFG00000007583	RAD54L	100	76.235	Loxodonta_africana
ENSONIG00000007659	rad54l	99	77.078	ENSMFAG00000031241	RAD54L	99	77.078	Macaca_fascicularis
ENSONIG00000007659	rad54l	99	77.078	ENSMMUG00000011568	RAD54L	99	77.078	Macaca_mulatta
ENSONIG00000007659	rad54l	99	77.078	ENSMNEG00000038562	RAD54L	99	77.078	Macaca_nemestrina
ENSONIG00000007659	rad54l	99	77.212	ENSMLEG00000038145	RAD54L	99	77.212	Mandrillus_leucophaeus
ENSONIG00000007659	rad54l	99	85.889	ENSMAMG00000022180	rad54l	99	88.018	Mastacembelus_armatus
ENSONIG00000007659	rad54l	100	99.053	ENSMZEG00005018081	rad54l	100	99.053	Maylandia_zebra
ENSONIG00000007659	rad54l	99	79.189	ENSMGAG00000010634	RAD54L	99	79.189	Meleagris_gallopavo
ENSONIG00000007659	rad54l	99	76.882	ENSMAUG00000020076	Rad54l	99	76.882	Mesocricetus_auratus
ENSONIG00000007659	rad54l	99	77.078	ENSMICG00000003266	RAD54L	99	77.078	Microcebus_murinus
ENSONIG00000007659	rad54l	99	77.078	ENSMOCG00000001778	Rad54l	99	77.078	Microtus_ochrogaster
ENSONIG00000007659	rad54l	100	84.718	ENSMALG00000021148	rad54l	100	84.718	Monopterus_albus
ENSONIG00000007659	rad54l	99	72.751	MGP_CAROLIEiJ_G0026325	Rad54l	99	72.751	Mus_caroli
ENSONIG00000007659	rad54l	99	76.542	ENSMUSG00000028702	Rad54l	99	76.542	Mus_musculus
ENSONIG00000007659	rad54l	99	76.644	MGP_PahariEiJ_G0028657	Rad54l	99	76.644	Mus_pahari
ENSONIG00000007659	rad54l	99	76.676	MGP_SPRETEiJ_G0027297	Rad54l	99	76.676	Mus_spretus
ENSONIG00000007659	rad54l	99	76.676	ENSMPUG00000012883	RAD54L	99	76.676	Mustela_putorius_furo
ENSONIG00000007659	rad54l	99	77.644	ENSMLUG00000003763	RAD54L	99	77.644	Myotis_lucifugus
ENSONIG00000007659	rad54l	99	76.779	ENSNGAG00000024213	Rad54l	99	76.779	Nannospalax_galili
ENSONIG00000007659	rad54l	99	77.212	ENSNLEG00000016548	RAD54L	99	77.212	Nomascus_leucogenys
ENSONIG00000007659	rad54l	91	78.338	ENSMEUG00000006793	RAD54L	100	78.338	Notamacropus_eugenii
ENSONIG00000007659	rad54l	90	80.139	ENSOPRG00000016016	RAD54L	90	80.139	Ochotona_princeps
ENSONIG00000007659	rad54l	99	77.346	ENSODEG00000008519	RAD54L	99	77.346	Octodon_degus
ENSONIG00000007659	rad54l	99	77.108	ENSOCUG00000005229	RAD54L	99	77.108	Oryctolagus_cuniculus
ENSONIG00000007659	rad54l	100	82.679	ENSORLG00000002958	rad54l	100	82.432	Oryzias_latipes
ENSONIG00000007659	rad54l	99	82.679	ENSORLG00020006554	rad54l	99	85.735	Oryzias_latipes_hni
ENSONIG00000007659	rad54l	100	82.432	ENSORLG00015002907	rad54l	100	82.568	Oryzias_latipes_hsok
ENSONIG00000007659	rad54l	99	83.333	ENSOMEG00000007770	rad54l	99	83.333	Oryzias_melastigma
ENSONIG00000007659	rad54l	99	76.738	ENSOARG00000002264	RAD54L	99	76.738	Ovis_aries
ENSONIG00000007659	rad54l	99	77.346	ENSPPAG00000031222	RAD54L	99	77.346	Pan_paniscus
ENSONIG00000007659	rad54l	99	76.273	ENSPPRG00000010317	RAD54L	99	76.273	Panthera_pardus
ENSONIG00000007659	rad54l	99	76.273	ENSPTIG00000012200	RAD54L	99	76.273	Panthera_tigris_altaica
ENSONIG00000007659	rad54l	99	77.346	ENSPTRG00000000689	RAD54L	99	77.346	Pan_troglodytes
ENSONIG00000007659	rad54l	99	77.212	ENSPANG00000016295	RAD54L	99	77.212	Papio_anubis
ENSONIG00000007659	rad54l	99	77.069	ENSPKIG00000016172	rad54l	99	77.069	Paramormyrops_kingsleyae
ENSONIG00000007659	rad54l	99	79.564	ENSPSIG00000003258	RAD54L	99	79.564	Pelodiscus_sinensis
ENSONIG00000007659	rad54l	99	80.217	ENSPMGG00000016335	rad54l	99	80.217	Periophthalmus_magnuspinnatus
ENSONIG00000007659	rad54l	99	76.944	ENSPEMG00000011422	Rad54l	99	76.944	Peromyscus_maniculatus_bairdii
ENSONIG00000007659	rad54l	99	68.775	ENSPMAG00000007719	rad54l	99	68.775	Petromyzon_marinus
ENSONIG00000007659	rad54l	100	78.658	ENSPCIG00000029032	RAD54L	100	78.658	Phascolarctos_cinereus
ENSONIG00000007659	rad54l	86	87.264	ENSPFOG00000013732	rad54l	100	87.264	Poecilia_formosa
ENSONIG00000007659	rad54l	82	85.227	ENSPLAG00000023416	rad54l	99	85.227	Poecilia_latipinna
ENSONIG00000007659	rad54l	91	85.460	ENSPMEG00000008299	rad54l	100	85.460	Poecilia_mexicana
ENSONIG00000007659	rad54l	100	84.595	ENSPREG00000019955	rad54l	100	84.595	Poecilia_reticulata
ENSONIG00000007659	rad54l	99	65.060	ENSPPYG00000001398	RAD54L	99	65.060	Pongo_abelii
ENSONIG00000007659	rad54l	80	77.778	ENSPCAG00000005323	RAD54L	80	77.778	Procavia_capensis
ENSONIG00000007659	rad54l	99	76.542	ENSPCOG00000015423	RAD54L	99	76.542	Propithecus_coquereli
ENSONIG00000007659	rad54l	100	91.788	ENSPNYG00000002942	rad54l	99	92.637	Pundamilia_nyererei
ENSONIG00000007659	rad54l	100	83.941	ENSPNAG00000012483	rad54l	100	83.941	Pygocentrus_nattereri
ENSONIG00000007659	rad54l	99	76.676	ENSRNOG00000013148	Rad54l	99	76.676	Rattus_norvegicus
ENSONIG00000007659	rad54l	99	77.346	ENSRBIG00000043495	RAD54L	99	77.346	Rhinopithecus_bieti
ENSONIG00000007659	rad54l	99	77.212	ENSRROG00000020844	RAD54L	99	77.212	Rhinopithecus_roxellana
ENSONIG00000007659	rad54l	81	49.300	YGL163C	RAD54	71	49.767	Saccharomyces_cerevisiae
ENSONIG00000007659	rad54l	99	77.480	ENSSBOG00000024672	RAD54L	99	77.480	Saimiri_boliviensis_boliviensis
ENSONIG00000007659	rad54l	100	78.016	ENSSHAG00000000110	RAD54L	100	78.016	Sarcophilus_harrisii
ENSONIG00000007659	rad54l	100	88.919	ENSSDUG00000019147	rad54l	100	88.919	Seriola_dumerili
ENSONIG00000007659	rad54l	100	88.649	ENSSLDG00000012330	rad54l	100	88.649	Seriola_lalandi_dorsalis
ENSONIG00000007659	rad54l	84	76.726	ENSSARG00000006689	RAD54L	100	76.726	Sorex_araneus
ENSONIG00000007659	rad54l	99	88.179	ENSSPAG00000011016	rad54l	99	88.179	Stegastes_partitus
ENSONIG00000007659	rad54l	99	77.078	ENSSSCG00000003905	RAD54L	99	77.078	Sus_scrofa
ENSONIG00000007659	rad54l	99	78.735	ENSTGUG00000008233	RAD54L	99	79.139	Taeniopygia_guttata
ENSONIG00000007659	rad54l	100	80.214	ENSTRUG00000008410	rad54l	100	80.214	Takifugu_rubripes
ENSONIG00000007659	rad54l	100	79.357	ENSTNIG00000004716	rad54l	100	79.357	Tetraodon_nigroviridis
ENSONIG00000007659	rad54l	99	72.630	ENSTTRG00000006315	RAD54L	99	72.630	Tursiops_truncatus
ENSONIG00000007659	rad54l	99	76.518	ENSUAMG00000011824	RAD54L	99	76.518	Ursus_americanus
ENSONIG00000007659	rad54l	99	75.304	ENSUMAG00000023603	RAD54L	99	75.304	Ursus_maritimus
ENSONIG00000007659	rad54l	99	77.212	ENSVVUG00000007201	RAD54L	99	77.212	Vulpes_vulpes
ENSONIG00000007659	rad54l	96	75.000	ENSXETG00000004369	rad54l	99	75.175	Xenopus_tropicalis
ENSONIG00000007659	rad54l	55	81.818	ENSXCOG00000016028	rad54l	83	84.031	Xiphophorus_couchianus