EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000007816 (Gene tree)
Gene ID: 100693260
Gene Symbol: prpf38a
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9903 bases
Position: chrGL831201.1:2652947-2662849
Accession: 100693260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000009847	PRP38	PF03371.15	3.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000009853	-	1599	-	ENSONIP00000009847	309 (aa)	XP_003448827	I3JLV3

Gene Model

Click here to download ENSONIG00000007816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000007816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000007816	prpf38a	100	80.511	ENSG00000134748	PRPF38A	71	86.878	Homo_sapiens
ENSONIG00000007816	prpf38a	100	96.117	ENSAPOG00000011652	prpf38a	100	96.117	Acanthochromis_polyacanthus
ENSONIG00000007816	prpf38a	100	80.511	ENSAMEG00000009319	PRPF38A	71	86.878	Ailuropoda_melanoleuca
ENSONIG00000007816	prpf38a	72	93.213	ENSACIG00000012292	prpf38a	72	93.213	Amphilophus_citrinellus
ENSONIG00000007816	prpf38a	100	96.117	ENSAOCG00000018004	prpf38a	100	96.117	Amphiprion_ocellaris
ENSONIG00000007816	prpf38a	100	96.117	ENSAPEG00000021414	prpf38a	100	96.117	Amphiprion_percula
ENSONIG00000007816	prpf38a	72	94.118	ENSATEG00000004608	prpf38a	100	95.146	Anabas_testudineus
ENSONIG00000007816	prpf38a	79	76.613	ENSAPLG00000005827	PRPF38A	63	83.333	Anas_platyrhynchos
ENSONIG00000007816	prpf38a	100	80.192	ENSACAG00000008249	PRPF38A	71	86.425	Anolis_carolinensis
ENSONIG00000007816	prpf38a	100	80.511	ENSANAG00000027839	PRPF38A	71	86.878	Aotus_nancymaae
ENSONIG00000007816	prpf38a	100	56.230	ENSANAG00000029204	-	70	55.111	Aotus_nancymaae
ENSONIG00000007816	prpf38a	100	99.029	ENSACLG00000021595	prpf38a	100	99.029	Astatotilapia_calliptera
ENSONIG00000007816	prpf38a	100	84.026	ENSAMXG00000029274	prpf38a	71	93.213	Astyanax_mexicanus
ENSONIG00000007816	prpf38a	100	80.511	ENSBTAG00000002720	PRPF38A	75	86.878	Bos_taurus
ENSONIG00000007816	prpf38a	63	62.564	WBGene00008380	prp-38	59	64.362	Caenorhabditis_elegans
ENSONIG00000007816	prpf38a	100	80.511	ENSCJAG00000021594	PRPF38A	74	86.878	Callithrix_jacchus
ENSONIG00000007816	prpf38a	100	80.511	ENSCAFG00000003740	PRPF38A	71	86.878	Canis_familiaris
ENSONIG00000007816	prpf38a	100	80.511	ENSCAFG00020010939	PRPF38A	71	86.878	Canis_lupus_dingo
ENSONIG00000007816	prpf38a	100	80.511	ENSCHIG00000024730	PRPF38A	71	86.878	Capra_hircus
ENSONIG00000007816	prpf38a	86	76.667	ENSTSYG00000031994	-	63	83.146	Carlito_syrichta
ENSONIG00000007816	prpf38a	100	80.511	ENSTSYG00000009868	-	71	86.878	Carlito_syrichta
ENSONIG00000007816	prpf38a	100	81.994	ENSCPOG00000005079	PRPF38A	71	86.878	Cavia_porcellus
ENSONIG00000007816	prpf38a	100	78.205	ENSCCAG00000026502	PRPF38A	71	86.878	Cebus_capucinus
ENSONIG00000007816	prpf38a	93	53.633	ENSCATG00000044190	-	57	55.851	Cercocebus_atys
ENSONIG00000007816	prpf38a	100	80.511	ENSCATG00000032296	PRPF38A	71	86.878	Cercocebus_atys
ENSONIG00000007816	prpf38a	100	80.511	ENSCLAG00000005816	PRPF38A	71	86.878	Chinchilla_lanigera
ENSONIG00000007816	prpf38a	100	80.192	ENSCPBG00000014791	PRPF38A	71	86.425	Chrysemys_picta_bellii
ENSONIG00000007816	prpf38a	75	69.231	ENSCSAVG00000009580	-	71	71.429	Ciona_savignyi
ENSONIG00000007816	prpf38a	75	86.147	ENSCANG00000032608	PRPF38A	74	86.878	Colobus_angolensis_palliatus
ENSONIG00000007816	prpf38a	100	80.511	ENSCGRG00001018502	-	71	86.878	Cricetulus_griseus_chok1gshd
ENSONIG00000007816	prpf38a	84	70.115	ENSCGRG00001002557	-	74	73.303	Cricetulus_griseus_chok1gshd
ENSONIG00000007816	prpf38a	100	80.511	ENSCGRG00000014868	Prpf38a	71	86.878	Cricetulus_griseus_crigri
ENSONIG00000007816	prpf38a	72	92.793	ENSCSEG00000001269	prpf38a	76	92.793	Cynoglossus_semilaevis
ENSONIG00000007816	prpf38a	72	93.665	ENSCVAG00000012305	prpf38a	72	93.665	Cyprinodon_variegatus
ENSONIG00000007816	prpf38a	100	83.067	ENSDARG00000039213	prpf38a	71	91.403	Danio_rerio
ENSONIG00000007816	prpf38a	100	80.511	ENSDNOG00000042326	PRPF38A	72	86.878	Dasypus_novemcinctus
ENSONIG00000007816	prpf38a	84	73.004	ENSDORG00000025371	-	75	79.358	Dipodomys_ordii
ENSONIG00000007816	prpf38a	84	73.004	ENSDORG00000023691	-	75	79.358	Dipodomys_ordii
ENSONIG00000007816	prpf38a	85	96.875	ENSDORG00000023857	-	64	96.875	Dipodomys_ordii
ENSONIG00000007816	prpf38a	77	79.498	ENSEBUG00000012588	prpf38a	71	79.372	Eptatretus_burgeri
ENSONIG00000007816	prpf38a	100	80.511	ENSEASG00005014427	PRPF38A	71	86.878	Equus_asinus_asinus
ENSONIG00000007816	prpf38a	100	80.511	ENSECAG00000022628	PRPF38A	71	86.878	Equus_caballus
ENSONIG00000007816	prpf38a	100	94.498	ENSELUG00000021094	prpf38a	100	94.498	Esox_lucius
ENSONIG00000007816	prpf38a	100	80.511	ENSFCAG00000002518	PRPF38A	71	86.878	Felis_catus
ENSONIG00000007816	prpf38a	87	77.941	ENSFALG00000005598	-	66	84.444	Ficedula_albicollis
ENSONIG00000007816	prpf38a	99	74.839	ENSFALG00000003612	-	73	82.110	Ficedula_albicollis
ENSONIG00000007816	prpf38a	100	81.672	ENSFDAG00000011287	PRPF38A	72	86.878	Fukomys_damarensis
ENSONIG00000007816	prpf38a	90	82.079	ENSFHEG00000014317	prpf38a	75	93.213	Fundulus_heteroclitus
ENSONIG00000007816	prpf38a	54	96.386	ENSGMOG00000011384	prpf38a	54	96.386	Gadus_morhua
ENSONIG00000007816	prpf38a	100	80.511	ENSGALG00000010627	PRPF38A	71	86.878	Gallus_gallus
ENSONIG00000007816	prpf38a	72	93.665	ENSGAFG00000012422	prpf38a	72	93.665	Gambusia_affinis
ENSONIG00000007816	prpf38a	72	92.377	ENSGACG00000005423	prpf38a	100	93.569	Gasterosteus_aculeatus
ENSONIG00000007816	prpf38a	54	91.176	ENSGACG00000000182	-	100	91.176	Gasterosteus_aculeatus
ENSONIG00000007816	prpf38a	100	80.192	ENSGAGG00000020547	PRPF38A	71	86.425	Gopherus_agassizii
ENSONIG00000007816	prpf38a	100	80.511	ENSGGOG00000003940	PRPF38A	71	86.878	Gorilla_gorilla
ENSONIG00000007816	prpf38a	66	98.039	ENSHBUG00000020572	prpf38a	87	98.039	Haplochromis_burtoni
ENSONIG00000007816	prpf38a	100	80.511	ENSHGLG00000000475	PRPF38A	71	86.878	Heterocephalus_glaber_female
ENSONIG00000007816	prpf38a	100	72.990	ENSHGLG00000007918	-	71	74.661	Heterocephalus_glaber_female
ENSONIG00000007816	prpf38a	100	72.990	ENSHGLG00100003928	-	71	74.661	Heterocephalus_glaber_male
ENSONIG00000007816	prpf38a	100	80.511	ENSHGLG00100008935	PRPF38A	71	86.878	Heterocephalus_glaber_male
ENSONIG00000007816	prpf38a	59	93.407	ENSHCOG00000020781	prpf38a	59	93.617	Hippocampus_comes
ENSONIG00000007816	prpf38a	90	78.445	ENSIPUG00000005757	prpf38a	71	90.090	Ictalurus_punctatus
ENSONIG00000007816	prpf38a	100	80.511	ENSSTOG00000015610	PRPF38A	71	86.878	Ictidomys_tridecemlineatus
ENSONIG00000007816	prpf38a	100	80.192	ENSJJAG00000015811	Prpf38a	71	86.425	Jaculus_jaculus
ENSONIG00000007816	prpf38a	72	93.665	ENSKMAG00000006588	prpf38a	72	93.665	Kryptolebias_marmoratus
ENSONIG00000007816	prpf38a	100	93.528	ENSLBEG00000020585	prpf38a	100	93.528	Labrus_bergylta
ENSONIG00000007816	prpf38a	100	80.831	ENSLACG00000011495	PRPF38A	71	86.425	Latimeria_chalumnae
ENSONIG00000007816	prpf38a	100	90.645	ENSLOCG00000006262	prpf38a	72	88.288	Lepisosteus_oculatus
ENSONIG00000007816	prpf38a	100	80.511	ENSLAFG00000025862	PRPF38A	71	86.878	Loxodonta_africana
ENSONIG00000007816	prpf38a	100	80.511	ENSMFAG00000039449	PRPF38A	74	86.878	Macaca_fascicularis
ENSONIG00000007816	prpf38a	87	77.574	ENSMMUG00000014333	PRPF38A	65	83.425	Macaca_mulatta
ENSONIG00000007816	prpf38a	100	80.511	ENSMNEG00000031221	PRPF38A	71	86.878	Macaca_nemestrina
ENSONIG00000007816	prpf38a	93	52.941	ENSMNEG00000040242	-	65	57.488	Macaca_nemestrina
ENSONIG00000007816	prpf38a	100	80.511	ENSMLEG00000041105	PRPF38A	71	86.878	Mandrillus_leucophaeus
ENSONIG00000007816	prpf38a	100	96.117	ENSMAMG00000015431	prpf38a	100	96.117	Mastacembelus_armatus
ENSONIG00000007816	prpf38a	100	99.029	ENSMZEG00005017838	prpf38a	100	99.029	Maylandia_zebra
ENSONIG00000007816	prpf38a	75	86.147	ENSMGAG00000011176	PRPF38A	74	86.878	Meleagris_gallopavo
ENSONIG00000007816	prpf38a	85	81.439	ENSMAUG00000018029	-	84	82.353	Mesocricetus_auratus
ENSONIG00000007816	prpf38a	100	80.511	ENSMICG00000014193	PRPF38A	71	86.878	Microcebus_murinus
ENSONIG00000007816	prpf38a	100	80.511	ENSMOCG00000013080	Prpf38a	71	86.878	Microtus_ochrogaster
ENSONIG00000007816	prpf38a	100	88.746	ENSMMOG00000016972	prpf38a	78	95.023	Mola_mola
ENSONIG00000007816	prpf38a	100	78.981	ENSMODG00000000644	PRPF38A	71	84.685	Monodelphis_domestica
ENSONIG00000007816	prpf38a	100	95.469	ENSMALG00000019363	prpf38a	97	95.469	Monopterus_albus
ENSONIG00000007816	prpf38a	100	80.192	MGP_CAROLIEiJ_G0026269	Prpf38a	71	86.425	Mus_caroli
ENSONIG00000007816	prpf38a	100	80.192	ENSMUSG00000063800	Prpf38a	71	86.425	Mus_musculus
ENSONIG00000007816	prpf38a	100	80.192	MGP_PahariEiJ_G0028602	Prpf38a	71	86.425	Mus_pahari
ENSONIG00000007816	prpf38a	100	79.872	MGP_SPRETEiJ_G0027238	Prpf38a	93	90.957	Mus_spretus
ENSONIG00000007816	prpf38a	100	80.511	ENSMPUG00000006896	PRPF38A	71	86.878	Mustela_putorius_furo
ENSONIG00000007816	prpf38a	100	81.029	ENSNGAG00000011884	Prpf38a	72	86.878	Nannospalax_galili
ENSONIG00000007816	prpf38a	100	96.764	ENSNBRG00000004013	prpf38a	98	96.764	Neolamprologus_brichardi
ENSONIG00000007816	prpf38a	97	61.842	ENSNLEG00000012592	-	67	57.466	Nomascus_leucogenys
ENSONIG00000007816	prpf38a	93	79.310	ENSNLEG00000017999	PRPF38A	63	85.859	Nomascus_leucogenys
ENSONIG00000007816	prpf38a	93	54.983	ENSNLEG00000033398	-	60	50.228	Nomascus_leucogenys
ENSONIG00000007816	prpf38a	100	77.955	ENSMEUG00000003860	PRPF38A	71	83.258	Notamacropus_eugenii
ENSONIG00000007816	prpf38a	74	86.404	ENSOPRG00000008985	PRPF38A	92	86.878	Ochotona_princeps
ENSONIG00000007816	prpf38a	100	80.511	ENSODEG00000005869	PRPF38A	71	86.878	Octodon_degus
ENSONIG00000007816	prpf38a	75	44.206	ENSOANG00000009541	-	71	42.857	Ornithorhynchus_anatinus
ENSONIG00000007816	prpf38a	100	80.511	ENSOCUG00000000963	PRPF38A	71	86.878	Oryctolagus_cuniculus
ENSONIG00000007816	prpf38a	99	93.506	ENSORLG00000013485	prpf38a	79	92.308	Oryzias_latipes
ENSONIG00000007816	prpf38a	99	93.506	ENSORLG00020002130	prpf38a	79	92.308	Oryzias_latipes_hni
ENSONIG00000007816	prpf38a	99	93.182	ENSORLG00015021393	prpf38a	75	91.855	Oryzias_latipes_hsok
ENSONIG00000007816	prpf38a	100	93.528	ENSOMEG00000016333	prpf38a	72	92.760	Oryzias_melastigma
ENSONIG00000007816	prpf38a	100	80.511	ENSOGAG00000005423	PRPF38A	71	86.878	Otolemur_garnettii
ENSONIG00000007816	prpf38a	100	80.511	ENSOARG00000005373	PRPF38A	71	86.878	Ovis_aries
ENSONIG00000007816	prpf38a	93	67.010	ENSPPAG00000033867	-	68	67.873	Pan_paniscus
ENSONIG00000007816	prpf38a	100	80.511	ENSPPAG00000030905	PRPF38A	71	86.878	Pan_paniscus
ENSONIG00000007816	prpf38a	100	80.511	ENSPPRG00000013268	PRPF38A	71	86.878	Panthera_pardus
ENSONIG00000007816	prpf38a	100	80.511	ENSPTIG00000015419	PRPF38A	71	86.878	Panthera_tigris_altaica
ENSONIG00000007816	prpf38a	100	80.511	ENSPTRG00000000739	PRPF38A	74	86.878	Pan_troglodytes
ENSONIG00000007816	prpf38a	100	80.511	ENSPANG00000015483	PRPF38A	71	86.878	Papio_anubis
ENSONIG00000007816	prpf38a	100	93.204	ENSPKIG00000011439	prpf38a	72	92.308	Paramormyrops_kingsleyae
ENSONIG00000007816	prpf38a	100	80.511	ENSPSIG00000017487	PRPF38A	71	86.878	Pelodiscus_sinensis
ENSONIG00000007816	prpf38a	100	78.730	ENSPEMG00000011212	-	70	79.821	Peromyscus_maniculatus_bairdii
ENSONIG00000007816	prpf38a	100	80.511	ENSPEMG00000023277	-	71	86.878	Peromyscus_maniculatus_bairdii
ENSONIG00000007816	prpf38a	100	78.662	ENSPCIG00000022369	-	71	84.234	Phascolarctos_cinereus
ENSONIG00000007816	prpf38a	100	85.897	ENSPFOG00000004248	prpf38a	72	93.665	Poecilia_formosa
ENSONIG00000007816	prpf38a	92	80.556	ENSPLAG00000010328	prpf38a	72	93.665	Poecilia_latipinna
ENSONIG00000007816	prpf38a	92	80.556	ENSPMEG00000011804	prpf38a	72	93.665	Poecilia_mexicana
ENSONIG00000007816	prpf38a	94	78.859	ENSPREG00000002835	prpf38a	58	95.745	Poecilia_reticulata
ENSONIG00000007816	prpf38a	100	72.642	ENSPPYG00000001348	PRPF38A	71	75.664	Pongo_abelii
ENSONIG00000007816	prpf38a	100	80.192	ENSPCAG00000013328	PRPF38A	71	86.425	Procavia_capensis
ENSONIG00000007816	prpf38a	100	80.511	ENSPCOG00000016387	-	71	86.878	Propithecus_coquereli
ENSONIG00000007816	prpf38a	100	66.019	ENSPCOG00000020709	-	73	73.303	Propithecus_coquereli
ENSONIG00000007816	prpf38a	100	80.511	ENSPVAG00000009803	PRPF38A	71	86.878	Pteropus_vampyrus
ENSONIG00000007816	prpf38a	100	99.029	ENSPNYG00000005571	prpf38a	100	99.029	Pundamilia_nyererei
ENSONIG00000007816	prpf38a	100	83.067	ENSPNAG00000010399	prpf38a	71	91.855	Pygocentrus_nattereri
ENSONIG00000007816	prpf38a	100	80.831	ENSRNOG00000009451	Prpf38a	71	87.330	Rattus_norvegicus
ENSONIG00000007816	prpf38a	100	80.511	ENSRBIG00000036442	PRPF38A	74	86.878	Rhinopithecus_bieti
ENSONIG00000007816	prpf38a	98	69.180	ENSRROG00000040003	-	72	70.588	Rhinopithecus_roxellana
ENSONIG00000007816	prpf38a	100	80.511	ENSRROG00000032788	PRPF38A	71	86.878	Rhinopithecus_roxellana
ENSONIG00000007816	prpf38a	100	80.511	ENSSBOG00000019515	PRPF38A	71	86.878	Saimiri_boliviensis_boliviensis
ENSONIG00000007816	prpf38a	96	65.886	ENSSHAG00000006029	-	74	76.018	Sarcophilus_harrisii
ENSONIG00000007816	prpf38a	86	75.735	ENSSHAG00000006906	-	66	81.111	Sarcophilus_harrisii
ENSONIG00000007816	prpf38a	100	91.935	ENSSFOG00015013572	prpf38a	72	88.288	Scleropages_formosus
ENSONIG00000007816	prpf38a	72	94.118	ENSSMAG00000015379	prpf38a	72	94.118	Scophthalmus_maximus
ENSONIG00000007816	prpf38a	100	96.117	ENSSDUG00000001324	prpf38a	100	96.117	Seriola_dumerili
ENSONIG00000007816	prpf38a	100	96.117	ENSSLDG00000014803	prpf38a	100	96.117	Seriola_lalandi_dorsalis
ENSONIG00000007816	prpf38a	100	63.898	ENSSARG00000014458	PRPF38A	71	63.348	Sorex_araneus
ENSONIG00000007816	prpf38a	100	81.470	ENSSPUG00000013259	PRPF38A	71	88.235	Sphenodon_punctatus
ENSONIG00000007816	prpf38a	83	71.484	ENSSPAG00000010449	prpf38a	68	76.018	Stegastes_partitus
ENSONIG00000007816	prpf38a	100	80.511	ENSSSCG00000028288	PRPF38A	71	86.878	Sus_scrofa
ENSONIG00000007816	prpf38a	100	76.997	ENSTGUG00000008995	PRPF38A	71	81.900	Taeniopygia_guttata
ENSONIG00000007816	prpf38a	72	93.665	ENSTRUG00000003374	prpf38a	68	93.665	Takifugu_rubripes
ENSONIG00000007816	prpf38a	100	93.891	ENSTNIG00000005533	prpf38a	100	93.891	Tetraodon_nigroviridis
ENSONIG00000007816	prpf38a	100	79.872	ENSTBEG00000000725	PRPF38A	71	86.878	Tupaia_belangeri
ENSONIG00000007816	prpf38a	100	80.511	ENSTTRG00000016139	PRPF38A	71	86.878	Tursiops_truncatus
ENSONIG00000007816	prpf38a	100	80.511	ENSUAMG00000000625	PRPF38A	71	86.878	Ursus_americanus
ENSONIG00000007816	prpf38a	100	80.511	ENSUMAG00000022674	PRPF38A	71	86.878	Ursus_maritimus
ENSONIG00000007816	prpf38a	75	85.714	ENSVPAG00000000907	PRPF38A	71	86.425	Vicugna_pacos
ENSONIG00000007816	prpf38a	100	80.511	ENSVVUG00000004475	PRPF38A	71	86.878	Vulpes_vulpes
ENSONIG00000007816	prpf38a	100	79.936	ENSXETG00000008060	prpf38a	71	85.520	Xenopus_tropicalis
ENSONIG00000007816	prpf38a	72	91.480	ENSXCOG00000007393	prpf38a	74	91.480	Xiphophorus_couchianus
ENSONIG00000007816	prpf38a	72	93.665	ENSXMAG00000026143	prpf38a	72	93.665	Xiphophorus_maculatus