EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000008029 (Gene tree)
Gene ID: -
Gene Symbol: rbm42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6636 bases
Position: chrGL831177.1:1782448-1789083
Accession: ZDB-GENE-040809-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010112	RRM_1	PF00076.22	6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010121	-	1227	-	ENSONIP00000010112	408 (aa)	-	I3JML8

Gene Model

Click here to download ENSONIG00000008029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008029	rbm42	100	86.797	ENSAPOG00000015109	rbm42	100	86.797	Acanthochromis_polyacanthus
ENSONIG00000008029	rbm42	100	87.745	ENSACIG00000010771	rbm42	100	87.745	Amphilophus_citrinellus
ENSONIG00000008029	rbm42	100	87.531	ENSAOCG00000008873	rbm42	100	87.531	Amphiprion_ocellaris
ENSONIG00000008029	rbm42	100	87.531	ENSAPEG00000012051	rbm42	99	87.531	Amphiprion_percula
ENSONIG00000008029	rbm42	100	85.575	ENSATEG00000000536	rbm42	100	85.575	Anabas_testudineus
ENSONIG00000008029	rbm42	100	96.569	ENSACLG00000004988	rbm42	100	96.569	Astatotilapia_calliptera
ENSONIG00000008029	rbm42	100	74.524	ENSAMXG00000016545	rbm42	100	75.598	Astyanax_mexicanus
ENSONIG00000008029	rbm42	97	81.000	ENSCSEG00000010248	rbm42	100	81.250	Cynoglossus_semilaevis
ENSONIG00000008029	rbm42	100	80.387	ENSCVAG00000015589	rbm42	100	81.114	Cyprinodon_variegatus
ENSONIG00000008029	rbm42	100	70.673	ENSDARG00000039910	rbm42	100	72.397	Danio_rerio
ENSONIG00000008029	rbm42	100	72.471	ENSELUG00000022403	rbm42	100	70.991	Esox_lucius
ENSONIG00000008029	rbm42	65	79.853	ENSFHEG00000006764	rbm42	91	81.319	Fundulus_heteroclitus
ENSONIG00000008029	rbm42	100	72.048	ENSGMOG00000012660	rbm42	100	71.498	Gadus_morhua
ENSONIG00000008029	rbm42	76	78.730	ENSGAFG00000009059	rbm42	99	81.731	Gambusia_affinis
ENSONIG00000008029	rbm42	100	81.863	ENSGACG00000004170	rbm42	100	81.373	Gasterosteus_aculeatus
ENSONIG00000008029	rbm42	100	96.569	ENSHBUG00000011141	rbm42	100	96.569	Haplochromis_burtoni
ENSONIG00000008029	rbm42	100	78.589	ENSHCOG00000021214	rbm42	100	79.562	Hippocampus_comes
ENSONIG00000008029	rbm42	100	73.223	ENSIPUG00000022365	rbm42	99	73.810	Ictalurus_punctatus
ENSONIG00000008029	rbm42	91	80.214	ENSKMAG00000015287	rbm42	99	80.214	Kryptolebias_marmoratus
ENSONIG00000008029	rbm42	100	81.265	ENSLBEG00000017547	rbm42	100	82.482	Labrus_bergylta
ENSONIG00000008029	rbm42	85	81.034	ENSLBEG00000004578	-	96	82.471	Labrus_bergylta
ENSONIG00000008029	rbm42	100	67.213	ENSLOCG00000003368	rbm42	100	68.706	Lepisosteus_oculatus
ENSONIG00000008029	rbm42	100	86.797	ENSMAMG00000006708	rbm42	100	86.797	Mastacembelus_armatus
ENSONIG00000008029	rbm42	100	96.569	ENSMZEG00005025234	rbm42	100	96.569	Maylandia_zebra
ENSONIG00000008029	rbm42	91	87.366	ENSMALG00000015720	rbm42	100	87.366	Monopterus_albus
ENSONIG00000008029	rbm42	100	63.121	ENSORLG00020022507	rbm42	100	62.500	Oryzias_latipes_hni
ENSONIG00000008029	rbm42	100	82.353	ENSORLG00015000659	rbm42	100	82.353	Oryzias_latipes_hsok
ENSONIG00000008029	rbm42	59	83.402	ENSOMEG00000014332	rbm42	97	78.927	Oryzias_melastigma
ENSONIG00000008029	rbm42	100	74.641	ENSPKIG00000015165	rbm42	100	73.381	Paramormyrops_kingsleyae
ENSONIG00000008029	rbm42	92	67.754	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSONIG00000008029	rbm42	53	56.054	ENSPMAG00000008633	rbm42	100	49.067	Petromyzon_marinus
ENSONIG00000008029	rbm42	100	78.935	ENSPFOG00000007701	rbm42	100	81.114	Poecilia_formosa
ENSONIG00000008029	rbm42	100	78.935	ENSPLAG00000009405	rbm42	100	80.872	Poecilia_latipinna
ENSONIG00000008029	rbm42	100	78.935	ENSPMEG00000010375	rbm42	100	81.114	Poecilia_mexicana
ENSONIG00000008029	rbm42	100	79.177	ENSPREG00000018102	rbm42	100	81.356	Poecilia_reticulata
ENSONIG00000008029	rbm42	100	96.324	ENSPNYG00000014460	rbm42	100	96.324	Pundamilia_nyererei
ENSONIG00000008029	rbm42	100	73.286	ENSPNAG00000009961	rbm42	100	73.159	Pygocentrus_nattereri
ENSONIG00000008029	rbm42	100	71.194	ENSSFOG00015019227	rbm42	100	71.226	Scleropages_formosus
ENSONIG00000008029	rbm42	100	83.415	ENSSMAG00000011935	rbm42	100	83.659	Scophthalmus_maximus
ENSONIG00000008029	rbm42	100	88.264	ENSSDUG00000004033	rbm42	100	88.264	Seriola_dumerili
ENSONIG00000008029	rbm42	100	78.186	ENSSLDG00000009918	rbm42	100	97.183	Seriola_lalandi_dorsalis
ENSONIG00000008029	rbm42	100	87.531	ENSSPAG00000019871	rbm42	100	87.531	Stegastes_partitus
ENSONIG00000008029	rbm42	100	79.412	ENSTRUG00000024586	-	76	78.431	Takifugu_rubripes
ENSONIG00000008029	rbm42	99	67.500	ENSTNIG00000011669	rbm42	100	70.068	Tetraodon_nigroviridis
ENSONIG00000008029	rbm42	100	55.631	ENSXETG00000017599	rbm42	100	58.879	Xenopus_tropicalis
ENSONIG00000008029	rbm42	100	79.177	ENSXMAG00000012827	rbm42	100	81.356	Xiphophorus_maculatus