EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000008153 (Gene tree)
Gene ID: 100693307
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 15405 bases
Position: chrGL831447.1:475799-491203
Accession: 100693307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010265	RRM_4	PF10598.9	2.5e-48	1	1
ENSONIP00000010265	U5_2-snRNA_bdg	PF10597.9	6e-74	1	1
ENSONIP00000010265	PRO8NT	PF08082.11	1.5e-87	1	1
ENSONIP00000010265	U6-snRNA_bdg	PF10596.9	1.5e-89	1	1
ENSONIP00000010265	PROCN	PF08083.11	4e-236	1	1
ENSONIP00000010265	PRP8_domainIV	PF12134.8	3.5e-130	1	1
ENSONIP00000010265	PROCT	PF08084.11	2.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010274	-	7312	XM_003458608	ENSONIP00000010265	2350 (aa)	XP_003458656	I3JN21

Gene Model

Click here to download ENSONIG00000008153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008153	prpf8	100	97.490	ENSG00000174231	PRPF8	100	97.490	Homo_sapiens
ENSONIG00000008153	prpf8	100	98.979	ENSAPOG00000010079	prpf8	100	98.979	Acanthochromis_polyacanthus
ENSONIG00000008153	prpf8	100	97.490	ENSAMEG00000007940	PRPF8	100	97.490	Ailuropoda_melanoleuca
ENSONIG00000008153	prpf8	100	98.301	ENSACIG00000018280	prpf8	100	98.301	Amphilophus_citrinellus
ENSONIG00000008153	prpf8	100	98.936	ENSAOCG00000010725	prpf8	100	98.936	Amphiprion_ocellaris
ENSONIG00000008153	prpf8	100	98.936	ENSAPEG00000014397	prpf8	100	98.936	Amphiprion_percula
ENSONIG00000008153	prpf8	100	98.255	ENSATEG00000010062	prpf8	100	98.255	Anabas_testudineus
ENSONIG00000008153	prpf8	96	98.265	ENSAPLG00000010357	PRPF8	100	98.265	Anas_platyrhynchos
ENSONIG00000008153	prpf8	82	96.245	ENSACAG00000014784	PRPF8	100	96.245	Anolis_carolinensis
ENSONIG00000008153	prpf8	100	97.490	ENSANAG00000032629	PRPF8	100	97.490	Aotus_nancymaae
ENSONIG00000008153	prpf8	100	99.872	ENSACLG00000020858	prpf8	100	99.872	Astatotilapia_calliptera
ENSONIG00000008153	prpf8	100	98.340	ENSAMXG00000020291	prpf8	100	98.340	Astyanax_mexicanus
ENSONIG00000008153	prpf8	100	97.490	ENSBTAG00000011488	PRPF8	100	97.490	Bos_taurus
ENSONIG00000008153	prpf8	99	86.489	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSONIG00000008153	prpf8	100	97.490	ENSCJAG00000001911	PRPF8	100	97.490	Callithrix_jacchus
ENSONIG00000008153	prpf8	100	97.490	ENSCAFG00000019221	PRPF8	100	97.490	Canis_familiaris
ENSONIG00000008153	prpf8	95	98.394	ENSCAFG00020009943	PRPF8	100	98.394	Canis_lupus_dingo
ENSONIG00000008153	prpf8	100	97.490	ENSCHIG00000017499	PRPF8	100	97.490	Capra_hircus
ENSONIG00000008153	prpf8	100	97.490	ENSTSYG00000014120	PRPF8	100	97.490	Carlito_syrichta
ENSONIG00000008153	prpf8	96	96.169	ENSCAPG00000009459	PRPF8	99	96.169	Cavia_aperea
ENSONIG00000008153	prpf8	100	97.490	ENSCPOG00000010379	PRPF8	100	97.490	Cavia_porcellus
ENSONIG00000008153	prpf8	100	97.490	ENSCCAG00000031983	-	100	97.490	Cebus_capucinus
ENSONIG00000008153	prpf8	100	97.490	ENSCATG00000038595	PRPF8	100	97.490	Cercocebus_atys
ENSONIG00000008153	prpf8	100	97.490	ENSCLAG00000004388	PRPF8	100	97.490	Chinchilla_lanigera
ENSONIG00000008153	prpf8	100	97.490	ENSCSAG00000013929	PRPF8	100	97.490	Chlorocebus_sabaeus
ENSONIG00000008153	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSONIG00000008153	prpf8	100	97.447	ENSCPBG00000020409	PRPF8	100	97.447	Chrysemys_picta_bellii
ENSONIG00000008153	prpf8	98	93.112	ENSCSAVG00000007825	-	100	91.409	Ciona_savignyi
ENSONIG00000008153	prpf8	100	97.490	ENSCANG00000043088	PRPF8	100	97.490	Colobus_angolensis_palliatus
ENSONIG00000008153	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSONIG00000008153	prpf8	100	98.553	ENSCSEG00000007905	prpf8	100	98.553	Cynoglossus_semilaevis
ENSONIG00000008153	prpf8	100	98.596	ENSDARG00000026180	prpf8	100	98.596	Danio_rerio
ENSONIG00000008153	prpf8	93	97.533	ENSDNOG00000018471	PRPF8	99	97.533	Dasypus_novemcinctus
ENSONIG00000008153	prpf8	84	96.070	ENSDORG00000006185	Prpf8	96	96.070	Dipodomys_ordii
ENSONIG00000008153	prpf8	99	91.396	FBgn0033688	Prp8	97	91.922	Drosophila_melanogaster
ENSONIG00000008153	prpf8	100	92.174	ENSETEG00000017592	PRPF8	100	92.174	Echinops_telfairi
ENSONIG00000008153	prpf8	99	93.519	ENSEBUG00000006548	prpf8	99	93.519	Eptatretus_burgeri
ENSONIG00000008153	prpf8	100	97.490	ENSEASG00005009514	PRPF8	99	98.628	Equus_asinus_asinus
ENSONIG00000008153	prpf8	97	98.418	ENSECAG00000021318	PRPF8	100	98.418	Equus_caballus
ENSONIG00000008153	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSONIG00000008153	prpf8	98	97.261	ENSELUG00000007120	prpf8	99	97.261	Esox_lucius
ENSONIG00000008153	prpf8	100	97.490	ENSFCAG00000006297	PRPF8	100	97.490	Felis_catus
ENSONIG00000008153	prpf8	100	97.447	ENSFALG00000006628	PRPF8	100	97.447	Ficedula_albicollis
ENSONIG00000008153	prpf8	100	97.490	ENSFDAG00000004711	PRPF8	100	97.490	Fukomys_damarensis
ENSONIG00000008153	prpf8	100	98.383	ENSFHEG00000021084	prpf8	100	98.383	Fundulus_heteroclitus
ENSONIG00000008153	prpf8	100	96.212	ENSGMOG00000002028	prpf8	99	96.212	Gadus_morhua
ENSONIG00000008153	prpf8	100	97.447	ENSGALG00000002943	PRPF8	100	97.447	Gallus_gallus
ENSONIG00000008153	prpf8	99	98.677	ENSGAFG00000010337	prpf8	99	98.677	Gambusia_affinis
ENSONIG00000008153	prpf8	100	98.596	ENSGACG00000008504	prpf8	100	98.506	Gasterosteus_aculeatus
ENSONIG00000008153	prpf8	100	97.533	ENSGAGG00000008350	PRPF8	100	97.533	Gopherus_agassizii
ENSONIG00000008153	prpf8	100	97.490	ENSGGOG00000005516	PRPF8	100	97.490	Gorilla_gorilla
ENSONIG00000008153	prpf8	100	99.191	ENSHBUG00000016192	prpf8	100	99.191	Haplochromis_burtoni
ENSONIG00000008153	prpf8	100	97.490	ENSHGLG00000012029	PRPF8	100	97.490	Heterocephalus_glaber_female
ENSONIG00000008153	prpf8	100	97.490	ENSHGLG00100016494	PRPF8	100	97.490	Heterocephalus_glaber_male
ENSONIG00000008153	prpf8	100	98.468	ENSHCOG00000016414	prpf8	100	98.468	Hippocampus_comes
ENSONIG00000008153	prpf8	100	98.298	ENSIPUG00000023230	prpf8	100	98.298	Ictalurus_punctatus
ENSONIG00000008153	prpf8	100	97.490	ENSSTOG00000005128	PRPF8	100	97.490	Ictidomys_tridecemlineatus
ENSONIG00000008153	prpf8	100	95.364	ENSJJAG00000021159	Prpf8	100	95.364	Jaculus_jaculus
ENSONIG00000008153	prpf8	99	98.804	ENSKMAG00000016118	prpf8	100	98.804	Kryptolebias_marmoratus
ENSONIG00000008153	prpf8	100	98.511	ENSLBEG00000026903	prpf8	100	98.511	Labrus_bergylta
ENSONIG00000008153	prpf8	95	95.069	ENSLACG00000010479	PRPF8	99	98.213	Latimeria_chalumnae
ENSONIG00000008153	prpf8	99	98.043	ENSLOCG00000005409	prpf8	99	98.043	Lepisosteus_oculatus
ENSONIG00000008153	prpf8	100	97.490	ENSLAFG00000015445	PRPF8	100	97.490	Loxodonta_africana
ENSONIG00000008153	prpf8	100	97.490	ENSMFAG00000039995	PRPF8	100	97.490	Macaca_fascicularis
ENSONIG00000008153	prpf8	100	97.490	ENSMMUG00000004820	PRPF8	100	97.490	Macaca_mulatta
ENSONIG00000008153	prpf8	100	97.490	ENSMNEG00000035713	PRPF8	100	97.490	Macaca_nemestrina
ENSONIG00000008153	prpf8	100	97.490	ENSMLEG00000037937	PRPF8	100	97.490	Mandrillus_leucophaeus
ENSONIG00000008153	prpf8	100	98.809	ENSMAMG00000008919	prpf8	100	98.809	Mastacembelus_armatus
ENSONIG00000008153	prpf8	100	99.872	ENSMZEG00005015073	prpf8	100	99.872	Maylandia_zebra
ENSONIG00000008153	prpf8	100	97.447	ENSMGAG00000004769	PRPF8	100	97.447	Meleagris_gallopavo
ENSONIG00000008153	prpf8	100	97.490	ENSMICG00000010320	PRPF8	100	97.490	Microcebus_murinus
ENSONIG00000008153	prpf8	100	97.490	ENSMOCG00000016838	Prpf8	100	97.490	Microtus_ochrogaster
ENSONIG00000008153	prpf8	100	98.298	ENSMMOG00000011887	prpf8	100	98.298	Mola_mola
ENSONIG00000008153	prpf8	100	97.405	ENSMODG00000010480	PRPF8	100	97.405	Monodelphis_domestica
ENSONIG00000008153	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSONIG00000008153	prpf8	100	97.448	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.448	Mus_caroli
ENSONIG00000008153	prpf8	100	97.448	ENSMUSG00000020850	Prpf8	100	97.448	Mus_musculus
ENSONIG00000008153	prpf8	100	97.405	MGP_PahariEiJ_G0017877	Prpf8	100	97.405	Mus_pahari
ENSONIG00000008153	prpf8	100	97.448	MGP_SPRETEiJ_G0017583	Prpf8	100	97.448	Mus_spretus
ENSONIG00000008153	prpf8	100	97.490	ENSMPUG00000013227	PRPF8	100	97.490	Mustela_putorius_furo
ENSONIG00000008153	prpf8	100	97.366	ENSMLUG00000002666	PRPF8	100	97.366	Myotis_lucifugus
ENSONIG00000008153	prpf8	100	95.746	ENSNGAG00000005305	Prpf8	100	95.746	Nannospalax_galili
ENSONIG00000008153	prpf8	100	99.915	ENSNBRG00000013127	prpf8	100	99.915	Neolamprologus_brichardi
ENSONIG00000008153	prpf8	97	96.822	ENSNLEG00000000897	PRPF8	98	96.822	Nomascus_leucogenys
ENSONIG00000008153	prpf8	98	96.480	ENSMEUG00000015999	PRPF8	100	96.480	Notamacropus_eugenii
ENSONIG00000008153	prpf8	100	95.746	ENSOPRG00000003102	PRPF8	100	95.370	Ochotona_princeps
ENSONIG00000008153	prpf8	100	97.490	ENSODEG00000008468	PRPF8	100	97.490	Octodon_degus
ENSONIG00000008153	prpf8	81	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSONIG00000008153	prpf8	100	97.490	ENSOCUG00000000081	PRPF8	100	97.490	Oryctolagus_cuniculus
ENSONIG00000008153	prpf8	100	98.683	ENSORLG00000008036	prpf8	100	98.932	Oryzias_latipes
ENSONIG00000008153	prpf8	100	98.641	ENSORLG00020021070	prpf8	100	98.641	Oryzias_latipes_hni
ENSONIG00000008153	prpf8	100	98.683	ENSORLG00015002340	prpf8	100	98.683	Oryzias_latipes_hsok
ENSONIG00000008153	prpf8	100	97.239	ENSOMEG00000016866	prpf8	100	97.239	Oryzias_melastigma
ENSONIG00000008153	prpf8	100	97.366	ENSOARG00000013312	PRPF8	100	97.366	Ovis_aries
ENSONIG00000008153	prpf8	100	97.490	ENSPPAG00000042753	PRPF8	100	97.490	Pan_paniscus
ENSONIG00000008153	prpf8	100	97.490	ENSPPRG00000008746	PRPF8	100	97.490	Panthera_pardus
ENSONIG00000008153	prpf8	100	97.405	ENSPTIG00000019200	PRPF8	100	97.405	Panthera_tigris_altaica
ENSONIG00000008153	prpf8	100	97.490	ENSPTRG00000039576	PRPF8	100	97.490	Pan_troglodytes
ENSONIG00000008153	prpf8	98	98.393	ENSPANG00000024607	PRPF8	98	98.393	Papio_anubis
ENSONIG00000008153	prpf8	100	98.681	ENSPKIG00000011201	prpf8	100	98.681	Paramormyrops_kingsleyae
ENSONIG00000008153	prpf8	100	97.404	ENSPSIG00000013393	PRPF8	100	97.404	Pelodiscus_sinensis
ENSONIG00000008153	prpf8	100	97.490	ENSPEMG00000021699	Prpf8	100	97.490	Peromyscus_maniculatus_bairdii
ENSONIG00000008153	prpf8	96	93.942	ENSPMAG00000005438	prpf8	100	93.987	Petromyzon_marinus
ENSONIG00000008153	prpf8	100	97.405	ENSPCIG00000022603	PRPF8	100	98.304	Phascolarctos_cinereus
ENSONIG00000008153	prpf8	100	98.685	ENSPFOG00000007005	prpf8	100	98.685	Poecilia_formosa
ENSONIG00000008153	prpf8	100	96.894	ENSPLAG00000020777	prpf8	100	96.894	Poecilia_latipinna
ENSONIG00000008153	prpf8	100	98.685	ENSPMEG00000004051	prpf8	100	98.685	Poecilia_mexicana
ENSONIG00000008153	prpf8	100	98.601	ENSPREG00000021902	prpf8	100	98.601	Poecilia_reticulata
ENSONIG00000008153	prpf8	100	97.490	ENSPPYG00000007777	PRPF8	100	97.490	Pongo_abelii
ENSONIG00000008153	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSONIG00000008153	prpf8	100	97.490	ENSPCOG00000015182	PRPF8	100	97.490	Propithecus_coquereli
ENSONIG00000008153	prpf8	93	98.614	ENSPVAG00000002134	PRPF8	93	98.614	Pteropus_vampyrus
ENSONIG00000008153	prpf8	100	99.191	ENSPNYG00000016356	prpf8	100	99.191	Pundamilia_nyererei
ENSONIG00000008153	prpf8	100	98.383	ENSPNAG00000009247	prpf8	100	98.383	Pygocentrus_nattereri
ENSONIG00000008153	prpf8	100	97.448	ENSRNOG00000003495	Prpf8	100	97.448	Rattus_norvegicus
ENSONIG00000008153	prpf8	100	97.490	ENSRBIG00000031219	PRPF8	100	97.947	Rhinopithecus_bieti
ENSONIG00000008153	prpf8	100	97.490	ENSRROG00000038014	PRPF8	100	97.947	Rhinopithecus_roxellana
ENSONIG00000008153	prpf8	98	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSONIG00000008153	prpf8	100	97.490	ENSSBOG00000029717	PRPF8	100	97.490	Saimiri_boliviensis_boliviensis
ENSONIG00000008153	prpf8	100	97.363	ENSSHAG00000006167	PRPF8	100	97.363	Sarcophilus_harrisii
ENSONIG00000008153	prpf8	100	98.340	ENSSFOG00015013905	prpf8	100	98.340	Scleropages_formosus
ENSONIG00000008153	prpf8	100	98.596	ENSSMAG00000017736	prpf8	100	98.596	Scophthalmus_maximus
ENSONIG00000008153	prpf8	100	98.936	ENSSDUG00000003029	prpf8	100	98.936	Seriola_dumerili
ENSONIG00000008153	prpf8	68	99.750	ENSSLDG00000017096	prpf8	100	99.750	Seriola_lalandi_dorsalis
ENSONIG00000008153	prpf8	87	94.626	ENSSARG00000002892	PRPF8	87	94.626	Sorex_araneus
ENSONIG00000008153	prpf8	100	97.320	ENSSPUG00000007463	PRPF8	100	97.320	Sphenodon_punctatus
ENSONIG00000008153	prpf8	100	98.383	ENSSPAG00000015639	prpf8	100	98.383	Stegastes_partitus
ENSONIG00000008153	prpf8	100	97.490	ENSSSCG00000017817	PRPF8	100	97.490	Sus_scrofa
ENSONIG00000008153	prpf8	100	97.447	ENSTGUG00000005648	-	100	97.447	Taeniopygia_guttata
ENSONIG00000008153	prpf8	51	98.953	ENSTGUG00000015597	-	95	98.953	Taeniopygia_guttata
ENSONIG00000008153	prpf8	100	98.468	ENSTRUG00000015906	prpf8	100	98.468	Takifugu_rubripes
ENSONIG00000008153	prpf8	95	99.522	ENSTNIG00000003460	prpf8	99	99.522	Tetraodon_nigroviridis
ENSONIG00000008153	prpf8	93	98.979	ENSTBEG00000006431	PRPF8	93	98.979	Tupaia_belangeri
ENSONIG00000008153	prpf8	100	96.937	ENSTTRG00000006869	PRPF8	100	96.937	Tursiops_truncatus
ENSONIG00000008153	prpf8	54	96.157	ENSUAMG00000015644	-	96	96.157	Ursus_americanus
ENSONIG00000008153	prpf8	100	97.235	ENSUMAG00000009385	PRPF8	100	97.235	Ursus_maritimus
ENSONIG00000008153	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSONIG00000008153	prpf8	100	97.490	ENSVVUG00000021695	PRPF8	99	97.490	Vulpes_vulpes
ENSONIG00000008153	prpf8	100	97.150	ENSXETG00000022259	prpf8	100	97.150	Xenopus_tropicalis
ENSONIG00000008153	prpf8	100	98.511	ENSXCOG00000012775	prpf8	100	98.511	Xiphophorus_couchianus
ENSONIG00000008153	prpf8	100	98.468	ENSXMAG00000008505	prpf8	100	98.468	Xiphophorus_maculatus